These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5281#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 800 fasta sequence [TTTCTGTGCCATTGCTGGGAATTATATTTCTAGTAATGTCATTAAGAAATACCAACGACAACCACTTCACAATTATGTTAATAAATAGGAA-ACAAATATAATTTTTACATTGGTCTTATGACCAGATTTTACAATTTCTTTCCACACAGGGCCAAACAAAGATAAGCAGCGGAAAAAGAATCGAGAGGCACCAATGAGACACCATAGGCAATCGACTGAGGCACGAAACCTATTCGACA-TCCTCAGCAACAGAACTTCTGGAAACAACTGACCTTCTCTGAAATTTTGTGAGACAACAAGGGTGAGTACATAAAGTACTCGCAAGTGTACGGGAATATGCAATATATGATACATGGCTTCAAAGGAAGGTTAGGGTTCATTTGCATAAAGGCATTTGCGAACTTAAATACAATAAATGGATACAAATTTAATTTAAACAACATTTGCAATCACGGTATTTTTAACCAACCAACCAACCCAAAAAGGATATTGCGTCCACACAGGACCACACAGCTATATTCATTAATTTATCCTGCACACAGCTCTTTCCCAAAAGTAAAACTTTCACAAATCTACCCCTCATGTGAAATCACCGAGCATGTCCATAACCGAGGACGCGGCTATTCGAATAGATTAACACTCTGCAGAGGTTATACAACTTTACCCACAAGATACAGTTCGGTGCCGCTAAACACCAAAGAGTAACAAAGCGTTTCCTCTACCTCACCCTAACACCGGCTTCCCCATGGGCGGTCCTCCCATCACCACACAGGTGAAAGGTCCCATGTACAATCCAAAAA] [+] EMBL CB629785 [TTTCTGTGCCATTGCTGGGAATTATATTTCTAGTAATGTCATTAAGAAATACCAACGACAACCACATCACAATTATGTTAATAAATAGGAA ACAAATATAATTTTTACATTGGTCTTATGACCAGATTTTACAATTTCTTTCCACACAGGGCCAAACAAAGATAAGCAGCGGAAAAAGAATCGAGAGGCACCAATGAGACACCATAGGCAATCGACTGAGGCACGAAACCTATTCGACA TCCTCAGCAACAGAACTTCTGGAAACAACTGACCTTCTCTGAAATTTTGTGAGACAACAAGGGTGAGTACATAAAGTACTCGCAAGTGTACGGGAATATGCAATATATGATACATGGCTTCAAAGGAAGGTTAGGGTTCATTTGCATAAAGGCATTTGCGAACTTAAATACAATAAATGGATACAAATTTAATTTAAACAACATTTGCAATCACGGTATTTTTAACCAACCAACCAACCCAAAAAGGATATTGCGTCCACACAGGACCACACAGCTATATTCATTAATTTATCCTGCACACAGCTCTTTCCCAAAAGTAAAACTTTCACAAATCTACCCCTCATGTGAAATCACCGAGCATGTCCATAACCGAGGACGCGGCTATTCGAATAGATTAACACTCTGCAGAGGTTATACAACTTTACCCACAAGATACAGTTCGGTGCCGCTAAACACCAAAGAGTAACAAAGCGTTTCCTCTACCTCACCCTAACACCGGCTTCCCCATGGGCGGTCCTCCCATCACCACACAGGTGAAAGGTCCCATGTACAATCCAAAAA] [+] EMBL CB635952 [ TTCACAATTATGTTAATAAATAGGAA ACAAATATAATTTTTACATTGGTTTTACTAAAAAATTTTACAATTTTTTTCCACACAGGGCCAAACAAAGATAAGCAGCGGAAAAAGAATCGAGAGGCACCAATGAGACACCATAGGCAATCGACTGAGGCACGAAACCTATTCGACA TCCTCAGCAACAGAACTTCTGGAAACAACTGACCTTCTCTGAAATTTTGTGAGACAACAAGGGTGAGTACATAAAGTACTCGCAAGTGTACGGGAATATGCAATATATGATACATGGCTTCAAATGAAGGTTAGGGTTCATTTGCATAAAGGCATTTGCGAACTTAAATACAATAAATGGATACAAATTTAATTTAAACAACATTTGCAATCACGGTATTTTTAACCAACCAACCAACCCAAAAAGGATATTGCGTCCACACAGGACCACACAGCTATATTCATTAATTTATCCTGCACACAGCTCTTTCCCAAAAGTAAAACTTTCACAAATCTACCCCTCATGTGAAATCACCGAGCATGTCCATAACCGAGGACGCGGCTATTCGAATAGATTAACACTCTGCAGAGGTTATACAACTTTACCCACAAGATACAGTTCGGTGCCGCTAAACACC ] [-] EMBL BM421885 [ tttTTCACAATTATGTTAATAAATAGGAAGACAAATATAATTTTTACA TGGTCTTATGACCAGATTTTACAATTTCTTTCCACACAGGGCCAAACAAAGATAAACAGCGGAAAAAGAATCGAGAGGCACCAATGAGACACCATAGGCAATCGACTGAGGCACGAAACCTATTCGACAGTCCTCAGCAACAGAACTTCTGGAAACAGCTGACCTTCTCTGAAATTTNGTGAGACAACAAGGGTGAGTACATAACGTACTCGCAAGTGTACGGGAATATGCAATATATGATACACGGCTTCAAAGGAAGGTTAGGGTTCATTTGCATAAAGGCATTTGCGAACTTAAATACAATAAATGGATACAAATTTAATTTAAACAACATTTGCAATCACGGTATTTTTAACCAACCAACCAACCCAAAAAGGATATTGCGTCCACACAGGACCACACAGCTATATTCATTAATTTATCCTG ACACAGCTCTTTCCCAAAAGTAAAACTTTCACAAATCTA CCCTCATGGGA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||