cluster # 5282

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5282 cluster # 5282 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5282#0 length = 1879 sequences # 3
consensusID : consensus_5282#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1879
fasta sequence
                              [CGGCTGCTACTACTACTGCGTTGTGCGCACAATGCCAAGCGACCCACTACTGCCCTGCGTCTGCGTGTGCCGCGTATACGCACAAGCCAAAGAGAATTTTTAGGCGGGTAGAAACAAAAATCAGACCCAGTTTCGCGCAAAAAAAAAAACAAAGAGAAGCCCGGGGGTAAGAGAGAGAGAGAGAATTTGGGAGATGTGAGACGGAAGCAACAAGCACATGAGCGTTTTGTGATTAGGAACGGACAAAACAAGGTCATAAGGCGGCCTAATCAGGATTGGAGGAGAGGTCTAGTCTCCCTTTCTAGTTTCCCCTACATGACCAGCGTTGCCACCAGGATTGCCACGCTCGTGCGGGCCGCGGCGGCGGCGAGCCGGCCATTGCGGCTCCACCGCCGGCCCGGCGGCGAGGATACGAGGATGGTGGTGATCGTCGGCGCCACGGGCACCGGGAAGACCAAGCTGTCCATCGACGCCGCCAAGGTGATCGGCGGCGAGGTTGTCAACGCCGACAAGATTCAGCTCTATGACGGCCTCGACGTGACCACCAACAAGGTGAGCCTCGCCGACCGCCGTGGCGTGCCGCACCACCTCCTCGGAGCCATCCGCCCCGAGGCCGGCGAGCTCCCGCCGTCGTCCTTCCGGTCCCTCGCCGCCGCCACGGCCGCGTCGATCGCGGCGAGGCGGCTCGTGCCGGTCATCGCCGGTGGGTCGAACTCCCTCATCCACGCCCTCCTCGCCGACCACTTCGACGCCTCCGCTGGCGATCCCTTCTCCCCCGCCGCCGCCTTCCGCCACTACCGCCCGGCGCTCCGGTTCCCGTGCTGCCTGCTCTGGGTCCACGTCGATGAGGCGCTCCTCGACGAGTACCTCGACCGCCGCGTGGACGACATGGTGGACGCTGGCATGGTCGAGGAGCTCCGGGAGTACTTCGCCACGACAACCGCCGCGGAGCGCGCCGCGCACTCCGGGCTGGGCAAGGCCATCGGCGTCCCCGAGCTCGGCGACTACTTCGCCGGGCGCAAGACCTTCTCCGAGGCGATCGACGACATCAAAGCCAACACCCGCGTCCTCGCCGCCGCGCAGGTGTCCAAGATCCGCCGCATGTCCGACGCCTGGGGCTGGCCCATCCACCGCCTCGACGCCTCCGACACAGTCCGCGCCAGGCTCACGCGGGCGGGCTCCGCCGCCGAGTCCGCCTCCTGGGAGCGCGACGTGCGCGGCCCAGGCCTCGCCACCATCCGCAGCTTCCTCGCCGATCAGTCACCGCCACCGCGCAGCGAGGGC-ACCAACGACTACCTGTACGCCATGGAGACGGAACCAGAGCCGCCGCCGCCGCCGACGTTGCCGCCGC-GGCTGCTCCGG-TTGCCGC-GGATGCAGTACTGCGACATGGT-GGGGTGAGCTC----GCCGCC-GCCGCCGCC-GCCGCACGGCGCC-GCAGTCAC-TTCA-TTGAAGGCTTTTGGGGGTTCGAG-GGTTTAGGCCGCCA-ATTTTCCAGTGTCCCGGCGGCGCCCTTCTCTGACACTGCTCGGTGGGCCCAGAAAAAGTAGCCAGTGACATAGA-AAGAAGAGACAAAGGTAATTAACGTAGAGAGAGAG-AAGCTAAGCTATGCA-ACTGATGAGAAGTGTTCTTCTTCATTGCAGCAGAATTTGTGTACTCTTT-CTTGGAGAGGTGGTGATTCATCACATCGCTCTCCTCCTAACCGCGGCACTGTATGTATGTAGTGAGTAGTACTAATCATCTAATTATCCACCGTGTTCAGAATTTTGAGACAGATAATGAGTACAGTCTAGTATATGATTTTTCATCAGTGTTTGTTGCAGTGCAACGGGTGACCTGCTCTATTTCCGGAGCTGAATTTTTTTTGGTTTGGTTTTGTTTGTTTTGTT]

[+] EMBL AK071216             [CGGCTGCTACTACTACTGCGTTGTGCGCACAATGCCAAGCGACCCACTACTGCCCTGCGTCTGCGTGTGCCGCGTATACGCACAAGCCAAAGAGAATTTTTAGGCGGGTAGAAACAAAAATCAGACCCAGTTTCGCGCAAAAAAAAAAACAAAGAGAAGCCCGGGGGTAAGAGAGAGAGAGAGAATTTGGGAGATGTGAGACGGAAGCAACAAGCACATGAGCGTTTTGTGATTAGGAACGGACAAAACAAGGTCATAAGGCGGCCTAATCAGGATTGGAGGAGAGGTCTAGTCTCCCTTTCTAGTTTCCCCTACATGACCAGCGTTGCCACCAGGATTGCCACGCTCGTGCGGGCCGCGGCGGCGGCGAGCCGGCCATTGCGGCTCCACCGCCGGCCCGGCGGCGAGGATACGAGGATGGTGGTGATCGTCGGCGCCACGGGCACCGGGAAGACCAAGCTGTCCATCGACGCCGCCAAGGTGATCGGCGGCGAGGTTGTCAACGCCGACAAGATTCAGCTCTATGACGGCCTCGACGTGACCACCAACAAGGTGAGCCTCGCCGACCGCCGTGGCGTGCCGCACCACCTCCTCGGAGCCATCCGCCCCGAGGCCGGCGAGCTCCCGCCGTCGTCCTTCCGGTCCCTCGCCGCCGCCACGGCCGCGTCGATCGCGGCGAGGCGGCTCGTGCCGGTCATCGCCGGTGGGTCGAACTCCCTCATCCACGCCCTCCTCGCCGACCACTTCGACGCCTCCGCTGGCGATCCCTTCTCCCCCGCCGCCGCCTTCCGCCACTACCGCCCGGCGCTCCGGTTCCCGTGCTGCCTGCTCTGGGTCCACGTCGATGAGGCGCTCCTCGACGAGTACCTCGACCGCCGCGTGGACGACATGGTGGACGCTGGCATGGTCGAGGAGCTCCGGGAGTACTTCGCCACGACAACCGCCGCGGAGCGCGCCGCGCACTCCGGGCTGGGCAAGGCCATCGGCGTCCCCGAGCTCGGCGACTACTTCGCCGGGCGCAAGACCTTCTCCGAGGCGATCGACGACATCAAAGCCAACACCCGCGTCCTCGCCGCCGCGCAGGTGTCCAAGATCCGCCGCATGTCCGACGCCTGGGGCTGGCCCATCCACCGCCTCGACGCCTCCGACACAGTCCGCGCCAGGCTCACGCGGGCGGGCTCCGCCGCCGAGTCCGCCTCCTGGGAGCGCGACGTGCGCGGCCCAGGCCTCGCCACCATCCGCAGCTTCCTCGCCGATCAGTCACCGCCACCGCGCAGCGAGGGC ACCAACGACTACCTGTACGCCATGGAGACGGAACCAGAGCCGCCGCCGCCGCAGACGTTGCCGCCGC GGCTGCTCCGG TTGCCGC GGATGCAGTACTGCGACATGGT GGGGTGAGCTC    GCCGCC GCCGCCGCC GCCGCACGGCGCC GCAGTCAC TTCA TTGAAGGCTTTTGGGGGTTCGAG GGTTTAGGCCGCCA ATTTTCCAGTGTCCCGGCGGCGCCCTTCTCTGACACTGCTCGGTGGGCCCAGAAAAAGTAGCCAGTGACATAGA AAGAAGAGACAAAGGTAATTAACGTAGAGAGAGAG AAGCTAAGCTATGCA ACTGATGAGAAGTGTTCTTCTTCATTGCAGCAGAATTTGTGTACTCTTT CTTGGAGAGGTGGTGATTCATCACATCGCTCTCCTCCTAACCGCGGCACTGTATGTATGTAGTGAGTAGTACTAATCATCTAATTATCCACCGTGTTCA                                                                                                                                ]
[-] EMBL AK107474             [                                                                                                                                                                                                                              CGTTTTGTGATTAGGAACGGACAAAACAAGGTCATAAGGCGGCCTAATCAGGATTGGAGGAGAGGTCTAGTCTCCCTTTCTAGTTTCCCCTACATGACCAGCGTTGCCACCAGGATTGCCACGCTCGTGCGGGCCGCGGCGGCGGCGAGCCGGCCATTGCGGCTCCACCGCCGGCCCGGCGGCGAGGATACGAGGATGGTGGTGATCGTCGGCGCCACGGGCACCGGGAAGACCAAGCTGTCCATCGACGCCGCCAAGGTGATCGGCGGCGAGGTTGTCAACGCCGACAAGATTCAGCTCTATGACGGCCTCGACGTGACCACCAACAAGGTGAGCCTCGCCGACCGCCGTGGCGTGCCGCACCACCTCCTCGGAGCCATCCGCCCCGAGGCCGGCGAGCTCCCGCCGTCGTCCTTCCGGTCCCTCGCCGCCGCCACGGCCGCGTCGATCGCGGCGAGGCGGCTCGTGCCGGTCATCGCCGGTGGGTCGAACTCCCTCATCCACGCCCTCCTCGCCGACCACTTCGACGCCTCCGCTGGCGATCCCTTCTCCCCCGCCGCCGCCTTCCGCCACTACCGCCCGGCGCTCCGGTTCCCGTGCTGCCTGCTCTGGGTCCACGTCGATGAGGCGCTCCTCGACGAGTACCTCGACCGCCGCGTGGACGACATGGTGGACGCTGGCATGGTCGAGGAGCTCCGGGAGTACTTCGCCACGACAACCGCCGCGGAGCGCGCCGCGCACTCCGGGCTGGGCAAGGCCATCGGCGTCCCCGAGCTCGGCGACTACTTCGCCGGGCGCAAGACCTTCTCCGAGGCGATCGACGACATCAAAGCCAACACCCGCGTCCTCGCCGCCGCGCAGGTGTCCAAGATCCGCCGCATGTCCGACGCCTGGGGCTGGCCCATCCACCGCCTCGACGCCTCCGACACAGTCCGCGCCAGGCTCACGCGGGCGGGCTCCGCCGCCGAGTCCGCCTCCTGGGAGCGGGACGTGCGCGGCCCAGGCCTCGCCACCATCCGCAGCTTCCTCGCCGATCAGTCACCGCCACCGCGCAGCGAGGGC ACCAACGACTACCTGTACGCCATGGAGACGGAACCAGAGCCGCCGCCGCCGCCGACGTTGCCGCCGC GGCTGCTCCGG TTGCCGC GGATGCAGTACTGCGACATGGT GGGGTGAGCTC    GCCGCC GCCGCCGCC GCCGCACGGCGCC GCAGTCAC TTCA TTGAAGGCTTTTGGGGGTTCGAG GGTTTAGGCCGCCA ATTTTCCAGTGTCCCGGCGGCGCCCTTCTCTGACACTGCTCGGTGGGCCCAGAAAAAGTAGCCAGTGACATAGA AAGAAGAGACAAAGGTAATTAACGTAGAGAGAGAG AAGCTAAGCTATGCA ACTGATGAGAAGTGTTCTTCTTCATTGCAGCAGAATTTGTGTACTCTTT CTTGGAGAGGTGGTGATTCATCACATCGCTCTCCTCCTAACCGCGGCACTGTATGTATGTAGTGAGTAGTACTAATCATCTAATTATCCACCGTGTTCAGAATTTTGAGACAGATAATGAGTACAGTCTAGTATATGATTTTTCATCAGTGTTTGTTGCAGTGCAACGGGTGACCTGCTCTATTTCCGGAGCTGAATTTTTTTTGGTTTGGTTTTGTTTGTTTTGTT]
[+] EMBL BI800931             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                tGGCAACCGACGAGTACCTGTACGCCATGGAG CGGTACCAGAGCCGCCACC CCGCCGACGTT CCACCGCTGTCTGCTCCGGCTTGCCGCGGGAT CAGTACTGCGACATGGTCGGGCTGAGCTCCCCAGCCGCCAGCCGCCGCCAGCCGCACGGCGCCTGCAGTCACATTCACTTGAAGGCTTTTGGGGGTTCGAGTGGTTTA GCCGCCACATTTTCCAGTGTCCC GCGGCGCCCTTCTCTGACACTGCTCGGTGGGCCCAGAAAAAGCAGCCAGTGACATAGACAAGAAGAGACAAAGGTAATTAACGTAGAGAGAGAGCAAGCTAAGCTAT CACACTGATGAGAAGTGTTCTTCTTCATTGCAGCAGAATTTGTGTACTCTTTCCTTGGAGAGGTGGTGATTCATCACATCGCTCTCCTCCTAACCGCGGCACTGTATGTATGTAGTGAGTAGTACTAATCATCTAATTATCCACCGTGTTCAGAATTTTGAGACAGATAATGAGTACAGTCTAGTATATGATTTTTCATCAaaaaaaa                                                                        ]




>consensus_5282#0
CGGCTGCTACTACTACTGCGTTGTGCGCACAATGCCAAGCGACCCACTACTGCCCTGCGT
CTGCGTGTGCCGCGTATACGCACAAGCCAAAGAGAATTTTTAGGCGGGTAGAAACAAAAA
TCAGACCCAGTTTCGCGCAAAAAAAAAAACAAAGAGAAGCCCGGGGGTAAGAGAGAGAGA
GAGAATTTGGGAGATGTGAGACGGAAGCAACAAGCACATGAGCGTTTTGTGATTAGGAAC
GGACAAAACAAGGTCATAAGGCGGCCTAATCAGGATTGGAGGAGAGGTCTAGTCTCCCTT
TCTAGTTTCCCCTACATGACCAGCGTTGCCACCAGGATTGCCACGCTCGTGCGGGCCGCG
GCGGCGGCGAGCCGGCCATTGCGGCTCCACCGCCGGCCCGGCGGCGAGGATACGAGGATG
GTGGTGATCGTCGGCGCCACGGGCACCGGGAAGACCAAGCTGTCCATCGACGCCGCCAAG
GTGATCGGCGGCGAGGTTGTCAACGCCGACAAGATTCAGCTCTATGACGGCCTCGACGTG
ACCACCAACAAGGTGAGCCTCGCCGACCGCCGTGGCGTGCCGCACCACCTCCTCGGAGCC
ATCCGCCCCGAGGCCGGCGAGCTCCCGCCGTCGTCCTTCCGGTCCCTCGCCGCCGCCACG
GCCGCGTCGATCGCGGCGAGGCGGCTCGTGCCGGTCATCGCCGGTGGGTCGAACTCCCTC
ATCCACGCCCTCCTCGCCGACCACTTCGACGCCTCCGCTGGCGATCCCTTCTCCCCCGCC
GCCGCCTTCCGCCACTACCGCCCGGCGCTCCGGTTCCCGTGCTGCCTGCTCTGGGTCCAC
GTCGATGAGGCGCTCCTCGACGAGTACCTCGACCGCCGCGTGGACGACATGGTGGACGCT
GGCATGGTCGAGGAGCTCCGGGAGTACTTCGCCACGACAACCGCCGCGGAGCGCGCCGCG
CACTCCGGGCTGGGCAAGGCCATCGGCGTCCCCGAGCTCGGCGACTACTTCGCCGGGCGC
AAGACCTTCTCCGAGGCGATCGACGACATCAAAGCCAACACCCGCGTCCTCGCCGCCGCG
CAGGTGTCCAAGATCCGCCGCATGTCCGACGCCTGGGGCTGGCCCATCCACCGCCTCGAC
GCCTCCGACACAGTCCGCGCCAGGCTCACGCGGGCGGGCTCCGCCGCCGAGTCCGCCTCC
TGGGAGCGCGACGTGCGCGGCCCAGGCCTCGCCACCATCCGCAGCTTCCTCGCCGATCAG
TCACCGCCACCGCGCAGCGAGGGCACCAACGACTACCTGTACGCCATGGAGACGGAACCA
GAGCCGCCGCCGCCGCCGACGTTGCCGCCGCGGCTGCTCCGGTTGCCGCGGATGCAGTAC
TGCGACATGGTGGGGTGAGCTCGCCGCCGCCGCCGCCGCCGCACGGCGCCGCAGTCACTT
CATTGAAGGCTTTTGGGGGTTCGAGGGTTTAGGCCGCCAATTTTCCAGTGTCCCGGCGGC
GCCCTTCTCTGACACTGCTCGGTGGGCCCAGAAAAAGTAGCCAGTGACATAGAAAGAAGA
GACAAAGGTAATTAACGTAGAGAGAGAGAAGCTAAGCTATGCAACTGATGAGAAGTGTTC
TTCTTCATTGCAGCAGAATTTGTGTACTCTTTCTTGGAGAGGTGGTGATTCATCACATCG
CTCTCCTCCTAACCGCGGCACTGTATGTATGTAGTGAGTAGTACTAATCATCTAATTATC
CACCGTGTTCAGAATTTTGAGACAGATAATGAGTACAGTCTAGTATATGATTTTTCATCA
GTGTTTGTTGCAGTGCAACGGGTGACCTGCTCTATTTCCGGAGCTGAATTTTTTTTGGTT
TGGTTTTGTTTGTTTTGTT
clustalw multiple alignements is not computed in this case