These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5282#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1879 fasta sequence [CGGCTGCTACTACTACTGCGTTGTGCGCACAATGCCAAGCGACCCACTACTGCCCTGCGTCTGCGTGTGCCGCGTATACGCACAAGCCAAAGAGAATTTTTAGGCGGGTAGAAACAAAAATCAGACCCAGTTTCGCGCAAAAAAAAAAACAAAGAGAAGCCCGGGGGTAAGAGAGAGAGAGAGAATTTGGGAGATGTGAGACGGAAGCAACAAGCACATGAGCGTTTTGTGATTAGGAACGGACAAAACAAGGTCATAAGGCGGCCTAATCAGGATTGGAGGAGAGGTCTAGTCTCCCTTTCTAGTTTCCCCTACATGACCAGCGTTGCCACCAGGATTGCCACGCTCGTGCGGGCCGCGGCGGCGGCGAGCCGGCCATTGCGGCTCCACCGCCGGCCCGGCGGCGAGGATACGAGGATGGTGGTGATCGTCGGCGCCACGGGCACCGGGAAGACCAAGCTGTCCATCGACGCCGCCAAGGTGATCGGCGGCGAGGTTGTCAACGCCGACAAGATTCAGCTCTATGACGGCCTCGACGTGACCACCAACAAGGTGAGCCTCGCCGACCGCCGTGGCGTGCCGCACCACCTCCTCGGAGCCATCCGCCCCGAGGCCGGCGAGCTCCCGCCGTCGTCCTTCCGGTCCCTCGCCGCCGCCACGGCCGCGTCGATCGCGGCGAGGCGGCTCGTGCCGGTCATCGCCGGTGGGTCGAACTCCCTCATCCACGCCCTCCTCGCCGACCACTTCGACGCCTCCGCTGGCGATCCCTTCTCCCCCGCCGCCGCCTTCCGCCACTACCGCCCGGCGCTCCGGTTCCCGTGCTGCCTGCTCTGGGTCCACGTCGATGAGGCGCTCCTCGACGAGTACCTCGACCGCCGCGTGGACGACATGGTGGACGCTGGCATGGTCGAGGAGCTCCGGGAGTACTTCGCCACGACAACCGCCGCGGAGCGCGCCGCGCACTCCGGGCTGGGCAAGGCCATCGGCGTCCCCGAGCTCGGCGACTACTTCGCCGGGCGCAAGACCTTCTCCGAGGCGATCGACGACATCAAAGCCAACACCCGCGTCCTCGCCGCCGCGCAGGTGTCCAAGATCCGCCGCATGTCCGACGCCTGGGGCTGGCCCATCCACCGCCTCGACGCCTCCGACACAGTCCGCGCCAGGCTCACGCGGGCGGGCTCCGCCGCCGAGTCCGCCTCCTGGGAGCGCGACGTGCGCGGCCCAGGCCTCGCCACCATCCGCAGCTTCCTCGCCGATCAGTCACCGCCACCGCGCAGCGAGGGC-ACCAACGACTACCTGTACGCCATGGAGACGGAACCAGAGCCGCCGCCGCCGCCGACGTTGCCGCCGC-GGCTGCTCCGG-TTGCCGC-GGATGCAGTACTGCGACATGGT-GGGGTGAGCTC----GCCGCC-GCCGCCGCC-GCCGCACGGCGCC-GCAGTCAC-TTCA-TTGAAGGCTTTTGGGGGTTCGAG-GGTTTAGGCCGCCA-ATTTTCCAGTGTCCCGGCGGCGCCCTTCTCTGACACTGCTCGGTGGGCCCAGAAAAAGTAGCCAGTGACATAGA-AAGAAGAGACAAAGGTAATTAACGTAGAGAGAGAG-AAGCTAAGCTATGCA-ACTGATGAGAAGTGTTCTTCTTCATTGCAGCAGAATTTGTGTACTCTTT-CTTGGAGAGGTGGTGATTCATCACATCGCTCTCCTCCTAACCGCGGCACTGTATGTATGTAGTGAGTAGTACTAATCATCTAATTATCCACCGTGTTCAGAATTTTGAGACAGATAATGAGTACAGTCTAGTATATGATTTTTCATCAGTGTTTGTTGCAGTGCAACGGGTGACCTGCTCTATTTCCGGAGCTGAATTTTTTTTGGTTTGGTTTTGTTTGTTTTGTT] [+] EMBL AK071216 [CGGCTGCTACTACTACTGCGTTGTGCGCACAATGCCAAGCGACCCACTACTGCCCTGCGTCTGCGTGTGCCGCGTATACGCACAAGCCAAAGAGAATTTTTAGGCGGGTAGAAACAAAAATCAGACCCAGTTTCGCGCAAAAAAAAAAACAAAGAGAAGCCCGGGGGTAAGAGAGAGAGAGAGAATTTGGGAGATGTGAGACGGAAGCAACAAGCACATGAGCGTTTTGTGATTAGGAACGGACAAAACAAGGTCATAAGGCGGCCTAATCAGGATTGGAGGAGAGGTCTAGTCTCCCTTTCTAGTTTCCCCTACATGACCAGCGTTGCCACCAGGATTGCCACGCTCGTGCGGGCCGCGGCGGCGGCGAGCCGGCCATTGCGGCTCCACCGCCGGCCCGGCGGCGAGGATACGAGGATGGTGGTGATCGTCGGCGCCACGGGCACCGGGAAGACCAAGCTGTCCATCGACGCCGCCAAGGTGATCGGCGGCGAGGTTGTCAACGCCGACAAGATTCAGCTCTATGACGGCCTCGACGTGACCACCAACAAGGTGAGCCTCGCCGACCGCCGTGGCGTGCCGCACCACCTCCTCGGAGCCATCCGCCCCGAGGCCGGCGAGCTCCCGCCGTCGTCCTTCCGGTCCCTCGCCGCCGCCACGGCCGCGTCGATCGCGGCGAGGCGGCTCGTGCCGGTCATCGCCGGTGGGTCGAACTCCCTCATCCACGCCCTCCTCGCCGACCACTTCGACGCCTCCGCTGGCGATCCCTTCTCCCCCGCCGCCGCCTTCCGCCACTACCGCCCGGCGCTCCGGTTCCCGTGCTGCCTGCTCTGGGTCCACGTCGATGAGGCGCTCCTCGACGAGTACCTCGACCGCCGCGTGGACGACATGGTGGACGCTGGCATGGTCGAGGAGCTCCGGGAGTACTTCGCCACGACAACCGCCGCGGAGCGCGCCGCGCACTCCGGGCTGGGCAAGGCCATCGGCGTCCCCGAGCTCGGCGACTACTTCGCCGGGCGCAAGACCTTCTCCGAGGCGATCGACGACATCAAAGCCAACACCCGCGTCCTCGCCGCCGCGCAGGTGTCCAAGATCCGCCGCATGTCCGACGCCTGGGGCTGGCCCATCCACCGCCTCGACGCCTCCGACACAGTCCGCGCCAGGCTCACGCGGGCGGGCTCCGCCGCCGAGTCCGCCTCCTGGGAGCGCGACGTGCGCGGCCCAGGCCTCGCCACCATCCGCAGCTTCCTCGCCGATCAGTCACCGCCACCGCGCAGCGAGGGC ACCAACGACTACCTGTACGCCATGGAGACGGAACCAGAGCCGCCGCCGCCGCAGACGTTGCCGCCGC GGCTGCTCCGG TTGCCGC GGATGCAGTACTGCGACATGGT GGGGTGAGCTC GCCGCC GCCGCCGCC GCCGCACGGCGCC GCAGTCAC TTCA TTGAAGGCTTTTGGGGGTTCGAG GGTTTAGGCCGCCA ATTTTCCAGTGTCCCGGCGGCGCCCTTCTCTGACACTGCTCGGTGGGCCCAGAAAAAGTAGCCAGTGACATAGA AAGAAGAGACAAAGGTAATTAACGTAGAGAGAGAG AAGCTAAGCTATGCA ACTGATGAGAAGTGTTCTTCTTCATTGCAGCAGAATTTGTGTACTCTTT CTTGGAGAGGTGGTGATTCATCACATCGCTCTCCTCCTAACCGCGGCACTGTATGTATGTAGTGAGTAGTACTAATCATCTAATTATCCACCGTGTTCA ] [-] EMBL AK107474 [ CGTTTTGTGATTAGGAACGGACAAAACAAGGTCATAAGGCGGCCTAATCAGGATTGGAGGAGAGGTCTAGTCTCCCTTTCTAGTTTCCCCTACATGACCAGCGTTGCCACCAGGATTGCCACGCTCGTGCGGGCCGCGGCGGCGGCGAGCCGGCCATTGCGGCTCCACCGCCGGCCCGGCGGCGAGGATACGAGGATGGTGGTGATCGTCGGCGCCACGGGCACCGGGAAGACCAAGCTGTCCATCGACGCCGCCAAGGTGATCGGCGGCGAGGTTGTCAACGCCGACAAGATTCAGCTCTATGACGGCCTCGACGTGACCACCAACAAGGTGAGCCTCGCCGACCGCCGTGGCGTGCCGCACCACCTCCTCGGAGCCATCCGCCCCGAGGCCGGCGAGCTCCCGCCGTCGTCCTTCCGGTCCCTCGCCGCCGCCACGGCCGCGTCGATCGCGGCGAGGCGGCTCGTGCCGGTCATCGCCGGTGGGTCGAACTCCCTCATCCACGCCCTCCTCGCCGACCACTTCGACGCCTCCGCTGGCGATCCCTTCTCCCCCGCCGCCGCCTTCCGCCACTACCGCCCGGCGCTCCGGTTCCCGTGCTGCCTGCTCTGGGTCCACGTCGATGAGGCGCTCCTCGACGAGTACCTCGACCGCCGCGTGGACGACATGGTGGACGCTGGCATGGTCGAGGAGCTCCGGGAGTACTTCGCCACGACAACCGCCGCGGAGCGCGCCGCGCACTCCGGGCTGGGCAAGGCCATCGGCGTCCCCGAGCTCGGCGACTACTTCGCCGGGCGCAAGACCTTCTCCGAGGCGATCGACGACATCAAAGCCAACACCCGCGTCCTCGCCGCCGCGCAGGTGTCCAAGATCCGCCGCATGTCCGACGCCTGGGGCTGGCCCATCCACCGCCTCGACGCCTCCGACACAGTCCGCGCCAGGCTCACGCGGGCGGGCTCCGCCGCCGAGTCCGCCTCCTGGGAGCGGGACGTGCGCGGCCCAGGCCTCGCCACCATCCGCAGCTTCCTCGCCGATCAGTCACCGCCACCGCGCAGCGAGGGC ACCAACGACTACCTGTACGCCATGGAGACGGAACCAGAGCCGCCGCCGCCGCCGACGTTGCCGCCGC GGCTGCTCCGG TTGCCGC GGATGCAGTACTGCGACATGGT GGGGTGAGCTC GCCGCC GCCGCCGCC GCCGCACGGCGCC GCAGTCAC TTCA TTGAAGGCTTTTGGGGGTTCGAG GGTTTAGGCCGCCA ATTTTCCAGTGTCCCGGCGGCGCCCTTCTCTGACACTGCTCGGTGGGCCCAGAAAAAGTAGCCAGTGACATAGA AAGAAGAGACAAAGGTAATTAACGTAGAGAGAGAG AAGCTAAGCTATGCA ACTGATGAGAAGTGTTCTTCTTCATTGCAGCAGAATTTGTGTACTCTTT CTTGGAGAGGTGGTGATTCATCACATCGCTCTCCTCCTAACCGCGGCACTGTATGTATGTAGTGAGTAGTACTAATCATCTAATTATCCACCGTGTTCAGAATTTTGAGACAGATAATGAGTACAGTCTAGTATATGATTTTTCATCAGTGTTTGTTGCAGTGCAACGGGTGACCTGCTCTATTTCCGGAGCTGAATTTTTTTTGGTTTGGTTTTGTTTGTTTTGTT] [+] EMBL BI800931 [ tGGCAACCGACGAGTACCTGTACGCCATGGAG CGGTACCAGAGCCGCCACC CCGCCGACGTT CCACCGCTGTCTGCTCCGGCTTGCCGCGGGAT CAGTACTGCGACATGGTCGGGCTGAGCTCCCCAGCCGCCAGCCGCCGCCAGCCGCACGGCGCCTGCAGTCACATTCACTTGAAGGCTTTTGGGGGTTCGAGTGGTTTA GCCGCCACATTTTCCAGTGTCCC GCGGCGCCCTTCTCTGACACTGCTCGGTGGGCCCAGAAAAAGCAGCCAGTGACATAGACAAGAAGAGACAAAGGTAATTAACGTAGAGAGAGAGCAAGCTAAGCTAT CACACTGATGAGAAGTGTTCTTCTTCATTGCAGCAGAATTTGTGTACTCTTTCCTTGGAGAGGTGGTGATTCATCACATCGCTCTCCTCCTAACCGCGGCACTGTATGTATGTAGTGAGTAGTACTAATCATCTAATTATCCACCGTGTTCAGAATTTTGAGACAGATAATGAGTACAGTCTAGTATATGATTTTTCATCAaaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||