cluster # 5314

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Oryza sativa
cluster # 5314 cluster # 5314 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5314#0 length = 692 sequences # 3

consensusID : consensus_5314#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 692
fasta sequence

                              [GCGCGGGTGCTCTGTATTTTATTTTTATATTTTTTGGGTTTTATAGTTATAACATTACGTACTAAAGACTATCAGTACTAAGGTACTACACATGTCCATCACAGCGTAAATTCATCCATCTTTTTTTTTGGTGTTTTCAAGAGCCCGTGCCAGACCTCCG-CGGTGAAAGTGCAGCCTAGTGCCC-GTTTTTCTCTTCATATCCTTCATTTCCAAGTCG-TAAGGAGCGTCTTTAG-GAAGCTATGTAGCAATATTGACTATGTGCT-GTGCTGGA-GGGTTCTCTCTCGA-GAGTGGGTTGTCGGACCAAGTTCATATGGTTTCTTG-TCGTTGGAAGTCTTGTGCGGGTGCTGGACAAGCTTTTGGGGAACAAAGTCTTTGTCAGGAGGTGAATGGAAGCCTGAAAGCGGGCTCGTGACCGGGTTCGATGCCGCTTAGAGACCAGCAGGAGTCTGGCAGAGGATGCTTTGTCCAAGGATGGGCAGAACGCAGCA-GCGGGCGCGCTGGCCAACACCGGCGCAAGTGGCCTGGAACTGGGCGGCAGAAGTAAGAGTCTTGCCAGGGCCGGCACAGTCGAGGTCAGCAACACCCAAGACGTCGGTGGCACAGCACTGAGGGCTGTCGTAGAGGCCAGAGCACGGGTCGTAGGAGCCCGCTCCGTTACCACCGCCTTCGTTACCACCACCACCATGACCACC]

[+] EMBL CB964464             [GCGCGGGTGCTCTGTATTTTATTTTTATATTTTTTGGGTTTTATAGTTATAACATTACGTACTAAAGACTATCAGTACTAAGGTACTACACATGTCCATCACAGCGTAAATTCATCCATCTTTTTTTTTGGTGTTTTCAAGAGCCCGTGCCAGACCTCCGTCGGTGAAAGTGCAGCCTAGTGCCCTGTTTTTCTCTTCATATCCTTCATTTCCAAGTCGATAAGGAGCGTCTTTAGAGAAGCTATGTAGCAATATTGACTATGTGCTNGTGCTGGACGGGTTCTCTCTCGACGAGTGGGTTGTCGGACCAAGTTCATATGGTTTCTTGATCGTTGGAAGTCTTGTGCGGGTGCTGGACAAGCTTTTGGGGAACAAAGTCTTGGTCAGGAGGTGAATGGAAGCCTGAAAGCGGGCTCGTGACCGGGTTCGATGCCGCTTAGAGACCAGCAGGAGTCTGGCAGAGGATGCTTGGTCCAAGGATGGGCAGAACGCAGCACGCGGGCGCGCTGGCCAACACCGGCGCAAGTGGCCTGGAACTGGGCGGCAGAAGTACGAGTCTTGCCAGAGCCGGCACAGTCGAGGTCAGCAACACCCAAGACGTCGGTGGCACAGACCTGAGGGCTGTCGTAGAGGCCAGAGCACGGGTCGTAGG                                                 ]
[+] EMBL BI305982             [                                            AGTTATAACATTACGTACTAAAGACTATCAGTACTAAGGTACTACACATGTCCATCACAGCGTAAATTCATCCATCTTTTTTTTTGGTGTTTTCAAGAGCCCGTGCCAGACCTCCG CGGTGAAAGTGCAGCCTAGTGCCC GTTTTTCTCTTCATATCCTTCATTTCCAAGTCG TAAGGAGCGTCTTTAG GAAGCTATGTAGCAATATTGACTATGTGCT GTGCTGGA GGGTTCTCTCTCGA GAGTGGGTTGTCGGACCAAGTTCATATGGTTTCTTG TCGTTGGAAGTCTTGTGCGGGTGCTGGACAAGCTTTTGGGGAACAAAGTCTTTGTCAGGAGGTGAATGGAAGCCTGAAAGCGGGCTCGTGACCGGGTTCGATGCCGCTTAGAGACCAGCAGGAGTCTGGCAGAGGATGCTTTGTCCAAGGATGGGCAGAACGCAGCA GCGGGCGCGCTGGCCAACACCGGCGCAAGTGGCCTGGAACTGGGCGGCAGAAGTAAGAGTCTTGCCAGGGCCGGCACAGTCGAGGTCAGCAACACCCAAGACGTCGGTGGCACAGCACTGAGGGCTGTCGTAGAGGCCAGAGCACGGGTCGTAGGAGCCCGCTCCGTTACCACCGCCTTCGTTACCACCACCACCATGACCACC]
[+] EMBL CB967249             [                                            AGTTATAACATTACGTACTAAAGACTATCAGTACTAAGGTACTACACATGTCCATCACAGCGTAAATTCATCCATCTTTTTTTTTGGTGTTTTCAAGAGCCCGTGCCAGACCTCCG CGGTGAAAGTGCAGCCTAGTGCCC GTTTTTCTCTTCATATCCTTCATTTCCAAGTCG TAAGGAGCGTCTTTAG GAAGCTATGTAGCAATATTGACTATGTGCT GTGCTGGA GGGTTCTCTCTCGA GAGTGGGTTGTCGGACCAAGTTCATATGGTTTCTTG TCGTTGGAAGTCTTGTGCGGGTGCTGGCCAAGCTTTTGGGGAACAAAGTCTTTGTCAGGAGGTGAATGGAAGCCTGAAAGCGGGCTCGTGACCGGGTTCGATGCCGCTTAGAGACCAGCAGGAGTCTGGCAGAGGATGCTTTGTCCAAGGATGGGCAGAACGCAGCA GCGGGCGCGCTGGCCAACACCGGCGCAAGTGGCCTGGAACTGGGCGGCAGAAGTAAGAGTCTTGCCAGGGCCGGCACAGTCGAGGTCAGCAACACCCAAGACGTCGGTGGCACAGCACTGAGGGCTGTCGTAGAGGCCAGAGCACGGGTCGTAGGAGCCGCCTCCGTTACCACCGNCTCCGTTACCAC                ]




>consensus_5314#0
GCGCGGGTGCTCTGTATTTTATTTTTATATTTTTTGGGTTTTATAGTTATAACATTACGT
ACTAAAGACTATCAGTACTAAGGTACTACACATGTCCATCACAGCGTAAATTCATCCATC
TTTTTTTTTGGTGTTTTCAAGAGCCCGTGCCAGACCTCCGCGGTGAAAGTGCAGCCTAGT
GCCCGTTTTTCTCTTCATATCCTTCATTTCCAAGTCGTAAGGAGCGTCTTTAGGAAGCTA
TGTAGCAATATTGACTATGTGCTGTGCTGGAGGGTTCTCTCTCGAGAGTGGGTTGTCGGA
CCAAGTTCATATGGTTTCTTGTCGTTGGAAGTCTTGTGCGGGTGCTGGACAAGCTTTTGG
GGAACAAAGTCTTTGTCAGGAGGTGAATGGAAGCCTGAAAGCGGGCTCGTGACCGGGTTC
GATGCCGCTTAGAGACCAGCAGGAGTCTGGCAGAGGATGCTTTGTCCAAGGATGGGCAGA
ACGCAGCAGCGGGCGCGCTGGCCAACACCGGCGCAAGTGGCCTGGAACTGGGCGGCAGAA
GTAAGAGTCTTGCCAGGGCCGGCACAGTCGAGGTCAGCAACACCCAAGACGTCGGTGGCA
CAGCACTGAGGGCTGTCGTAGAGGCCAGAGCACGGGTCGTAGGAGCCCGCTCCGTTACCA
CCGCCTTCGTTACCACCACCACCATGACCACC

clustalw multiple alignements is not computed in this case