cluster # 5316

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Oryza sativa
cluster # 5316 cluster # 5316 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5316#0 length = 523 sequences # 3

consensusID : consensus_5316#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 523
fasta sequence

                              [GTGCAATCTGACCGTGGTTGAAGTACAGGTGACAAATTGCGGAAGCGTGAAAGATGGGAGATCTGTTGCTTCCAAACAAGTTATTCTCTGGAAATTCTTCTGGTTCGCTGTCCCCTGTGACATCCA-ACATTGATTCACTGGCATCTCAGTTTCAATCTG-TTGGACTTGA-GGGGCAGGCTACCATGCAAGTCAAGGAATGCCCGGTGAAGCTCTCCTTACTAGGTCAGCAACTTCAGTTAGTCTAGGTTATCAGGCACCCCCCTTGGGAGGATTATACAGACAACGGGAGTGGACCACTTT-TTGGGCAGAAGTCTGCCAAGAAGTTTACTCCGGAGCGATACCTTTTGAGGTTTTACA-CA-AGAAAGATTACAACGGCATGCCGAGTTTTCTCTGGTTACGGCACGCGTACCTCATCTACTGGGGTGAGGAGTGAGGACTAAAATCCAGTTGATTTGGAAGAAAACAACCAAAAAAAGGAAATAAACATACCAAAAAGAGAGATAGAAATACCCCAAAAAAAAAA]

[+] EMBL BI803307             [GTGCAATCTGACCGTGGTTGAAGTACAGGTGACAAATTGCGGAAGCGTGAAAGATGGGAGATCTGTTGCTTCCAAACAAGTTATTCTCTGGAAATTCTTCTGGTTCGCTGTCCCCTGTGACATCCA ACATTGATTCACTGGCATCTCAGTTTCAATCTG TTGGACTTGA GGGGCAGGCTACCATGCAAGTCAAGGAATGCCCGGTGAAGCTCTCCTTACTAGGTCAGCAACTTCAGTTAGTCTAGGTTATCAGGCACCCCCCTTGGGAGGATTATACAGACAACGGGAGTGGACCACTTTCTTGGGCAGAAGTCTG CAAGAAGTTTACTCCGGAGCGATACCTTTTGAGGTTTTACA CA AGAAAGATTACAACGGCATGCCGAGTTTTCTCTGGTTACGGCACGCGTACCTCATCTACTGGGGTGAGGAGTGAGGACTAAAATCCCGTTGATTTGGAAGAAAACAACCAAAAAA                                                 ]
[+] EMBL BI813325             [                                                                                                                  CTGTGACATCCAGACATTGATTCACTGGCATCTCAGTTTCAATCTGTTTGGACTTGA GGGGCAGGCTACCATGCAAGTCAAGGAATGCCCGGTGAAGCTCTCCTTACTAGGTCA CAACTTCAGTTAGTCTAGGTTATCA GCACCCCCCTTGGGAGGATTATACAG CAACGGGAGTGGACCACTTT TT GGCAGAAGTCTGCCAAGAAGTTTACTCCGGAGCGATACCTTTTGAGGTTTTACACCACAGAAAGATTACAACGGCATGCCGAGTTTTCTCTGGTTACGGCACGCGTACCTCATCTACTGGGGTGAGGAGTGAGGACTAAAATCCAGTTGATTTGGAAGAAAACAACCCAAAAAAGGAAATAAACATACCAAAAAGAGAGATAGAAATACCCCAAAAAAAAAA]
[+] EMBL BI804438             [                                                                                                                  CTGTGACATCCA ACATTGATTCACTGGCATCTCAGTTTCAATCTG TTGGACTTGAGGGGGCAGGCTACCATGCAAGTCAAGGAATGCCCGGTGAAGCTCTCCTTACTAGGTCAGCAACTTCAGTTAGTCTAGGTTATCAGGCACCCCCCTTGGGAGGATTATACAGCCAACGGGAGTGGACCACTTT TTGGGCAGAAGTCTGCCAAGAAGTTTACTCCGGAGCGATACCTTTTGAGGTTTTACA CA AGAAAGATTACAACGGCATGCCGAGTTTTCTCTGGTTACGGCACGCGTACCTCATCTACTGGGGTGAGGAGTGAGGACTAAAATCCAGTTGATTTGGAAGAAAAC ACCAAAAAAA                                                ]




>consensus_5316#0
GTGCAATCTGACCGTGGTTGAAGTACAGGTGACAAATTGCGGAAGCGTGAAAGATGGGAG
ATCTGTTGCTTCCAAACAAGTTATTCTCTGGAAATTCTTCTGGTTCGCTGTCCCCTGTGA
CATCCAACATTGATTCACTGGCATCTCAGTTTCAATCTGTTGGACTTGAGGGGCAGGCTA
CCATGCAAGTCAAGGAATGCCCGGTGAAGCTCTCCTTACTAGGTCAGCAACTTCAGTTAG
TCTAGGTTATCAGGCACCCCCCTTGGGAGGATTATACAGACAACGGGAGTGGACCACTTT
TTGGGCAGAAGTCTGCCAAGAAGTTTACTCCGGAGCGATACCTTTTGAGGTTTTACACAA
GAAAGATTACAACGGCATGCCGAGTTTTCTCTGGTTACGGCACGCGTACCTCATCTACTG
GGGTGAGGAGTGAGGACTAAAATCCAGTTGATTTGGAAGAAAACAACCAAAAAAAGGAAA
TAAACATACCAAAAAGAGAGATAGAAATACCCCAAAAAAAAAA

clustalw multiple alignements is not computed in this case