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Oryza sativa
cluster # 5319 cluster # 5319       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5319#0 length = 3317 sequences # 2  
 consensus_5319#1 length = 313 sequences # 1  
consensusID : consensus_5319#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3317
fasta sequence 
                              [TAGTAGTTGTTTGGTCGTCTTCTTCCTTCGACTCGAAGAGATCGATCACTCTAGTCTTCCCCAGCTATCTATGGCGTCCCCCTGCTCCCAACCCTAGCTCACCCATGGGATCCAACACTCCACCCTCCCGCGCCGCCCTCGAGCCCTTCGCCACCCTCGACCCCGCCGCCCTCGCCGGCCTCCCAGCCTCCTCCCCGCTCACCGTCCGCTCCGCCGCCATCTCCTCCCCATACCTCTACCTCGGCACCGGCGGCGGCAAGCTCCTCCTCTTCACCCTCGATTCCCCCTCCCCCGACTTCCTCCGCCTCCTCCCCATCGGCCCCACCCGCCCCGTCTCCGCCATCCTCCCCCTCCCCGCCGTCGCCCGCCTCCTCCTCCTCGCCGACGGCCTCCTCCTCCTCGCGGACCCCCTCCTCTCCCGCCCCGTCCGCCGCCTCGGCTCCGTCCGCAACGTTGCCGCCGTCGCCGCCCGCGCCTCCGAATCCGACGATGATCGCCCCTCCTGCTCCCTCGCGGTCTCCGTCGGGAGGAAGCTGCTCCTCGTTGACCTCACCCTACACGACGCCGACGAGTTGGAGGTGCGGACGCGTGACATCGCCCTCGTCGATGGCGTCAAGGCGCTCGCTTGGGTCGGGGACTCCGTCTTCGTCGGCACTGCCTCGGGCTACTCGCTCTTCTCCACCACGAACGCCCAAGGTGGCGATATATTCACGCTCCCTGAGTCCTCCAGGCCACCCAGGG-TGAAGCCCCTGTCCGGGGGCGACGAGGTCATGCTGCTCGTCGACAATGTCGGGGTCGTCGTGGACCGATCGGGGCATCCCGTTGGAAGCAGCTTCGTCTTTAACACCACGCCGGATTGTATAGCGGAGGTGTACCCCTATGTTGTTGTTGCCGGGGACTCCAAGGTAGATGTCTACAGAAGAAAGAACGGCGCACATTTGCAGGCTATTCCTTTTGCAAGGCCTGGTACAGGTGGACTAATTGTAGCGAGCGAGGATGCCGGAATTGGCAGCGACGTAGTTGTGATTGCTACGGCTTATAAGGTATTTTGCTACCGTAAAGTATCAGCGGTGGAACAGATCAAGGCACTACTACGAAGAAAGAGTTATGCAGAAGCTATTTCTTTGTTACAAGAGTTCGAGGCCGATGGGGAAATCTCAAATGACATGATTTCCTTTGTGCATGCACAACTTGGATTCTTGTTGTTTTTCGACTTGCGTTTCGAGGATGCTGTAAATCATTTCTTGCTCTCGGAAACTATGCAACCAGCAGAAATATTTCCATTCATCATGCGGGACCCTAATCGTTGGTCAGATCTGGTGCCAAGAAAGCGTTATTGGGGCTTGCATGCTCCCCCAAAGCCTCTTGAAGAAGTTATTGATGATGGGCTAGTAACACTTCAACAGGCATTGTTTCTCAAAAAGGCAGGTGTGGACACAGTTGTGGATGATGATTTCCTTTCAAATCCACCAAGCAGAGCTGATCTGCTGGAAGTAGCAATCAGAAATATTATCAGGTACCTGTGTGCATCCCGAGAGAAGGATTTATCTTCTTCAGAGATGGAAGGGGTTGATACTCTTCTGATGTATCCTTATAGAGCTCTCAATCTTGTTGATGACATGGAGAAGCTTGCATCATCTCAGAATAGCTGTGTTGTGGAGGAACTAGAATCACTTTTGGATGACTCTGGACATCTGCGGACGCTTGCATTCTTATATGGCAGTAAAGGAATGTGCTCCAAATCCCTTGGTATCTGGCGTATCTTAGCAAGGAATTACAGCACTGGTTTGTGGAAGGATCATGCAATCCTACCTGAAACTGACTCTCTTGAAACTTCTGTTGGTAAAATGTCTGGTGAGGAAATTGCTGCCGTTGAAGCCTCCAAGATACTCCAAGCATCATCTGATCAGGACTTTGTTCTGGAGCATCTTGGATGGGTGGCAGACATTGATCAAGAGCTTGCAACTGCAATTTTAACATCTGAAATGAGGGAAAAACAGCTTTCTCCTGAAAAGGTTGTTGCTGCCATTGATCCAGAGAAGGTTGGCATTCACCAAAGATATTTGCAATGGTTGATTGAGGAACAGGAATGTGATGAGCCTCACTATCACACGTCATATGCATTGTCCCTCTCCAGATCTGCCATGGACGCAGTCCGTTTGGGATCCAACAATGAAGAGAGAAACAATAAAGAATTTGATTCTGATATGCAGTTCATTTATCTATTGAGGGAAAGGTTGCAATTTTTTTTGCAATCGTCAGATTTGTATGACCCAGAAGAAGTGCTATATGTGATTTCAGAATCTGAGCTATGGCTGGAAAAGGCTATTTTGTATAGGAAGATGGGCCAAGAGAACATTGTACTTCAGATATTAGCGCTGAAACTGGAGGATAGTGAAGCTGCTGAGCAGTACTGTGCAGAGATTGGTCGAGATGATGCCTATATTCAGCTGTTGGATTTGTATCTGGACCCCAAAAATGGGAAAGGACCCATGTTTACAGCAGCCGTTCGACTTCTCCATAACCATGGGGAATCATTGGATCCAATACAAGTGTTGGAGAGATTATCTGCTGATATGCCTCTTCAGCTAGCATCAGATACAATTTTGCGAATGCTGAGAGCCCGGGTGCACCATCATCGTCAAGGGCAGGTAGTTCATAATTTATCACGCGCAACGAACCTTGATGCACGGTTGACCAGATTAGAGGAGAGGTCAAGGCATGTGCAGCTAACTGACGAGAGCATATGTGATTCATGTCGAGCTCGCCTTGGCACCAAGCTGTTTGTCATGTACCCAGATGACTCAGTTGTATGCTACAGGTGCTACCGAAATCAAGGTGATTCTGCATCTCCACATGGACGCAACTTCAGGAAAGGTGGTATATTTAAACAAAGCTGGCTCGTTAGTAGATAACAAAGTTACAAGACAAGGAAACCATGGATGTGCGTGCCTCTGTTTCAGTGCTATGCGTCATGAAAGGAGAGCATATATAATTTGGTGGTGAAGCCTCCCCTTTGCATTTGAAGGAGCATTCAGCAGCGATACGGTCTGAAACCATCTGAAATGAAGCATTATCGTTGATCATGGCGATTGGAGGGAGGCAGAGAGAGCAGTGGTCCTGGAAGGTGATACCGTAGCTTCCGGTGGTCGACCAGAAACCATGATGTTTTTTTGTCCATAGGATTGTTGTTTTGTTTTGATAGGATAAGATGGGCTACATAATTTTAGGTATCGCTAGGATTTAATTTACACTGTAGACAAAACATAAGGCCTTTTGTGTCTAATAGAAGAAAGAAAGATGGAGAGCATTTGCCC]

[+] EMBL AK105679             [TAGTAGTTGTTTGGTCGTCTTCTTCCTTCGACTCGAAGAGATCGATCACTCTAGTCTTCCCCAGCTATCTATGGCGTCCCCCTGCTCCCAACCCTAGCTCACCCATGGGATCCAACACTCCACCCTCCCGCGCCGCCCTCGAGCCCTTCGCCACCCTCGACCCCGCCGCCCTCGCCGGCCTCCCAGCCTCCTCCCCGCTCACCGTCCGCTCCGCCGCCATCTCCTCCCCATACCTCTACCTCGGCACCGGCGGCGGCAAGCTCCTCCTCTTCACCCTCGATTCCCCCTCCCCCGACTTCCTCCGCCTCCTCCCCATCGGCCCCACCCGCCCCGTCTCCGCCATCCTCCCCCTCCCCGCCGTCGCCCGCCTCCTCCTCCTCGCCGACGGCCTCCTCCTCCTCGCGGACCCCCTCCTCTCCCGCCCCGTCCGCCGCCTCGGCTCCGTCCGCAACGTTGCCGCCGTCGCCGCCCGCGCCTCCGAATCCGACGATGATCGCCCCTCCTGCTCCCTCGCGGTCTCCGTCGGGAGGAAGCTGCTCCTCGTTGACCTCACCCTACACGACGCCGACGAGTTGGAGGTGCGGACGCGTGACATCGCCCTCGTCGATGGCGTCAAGGCGCTCGCTTGGGTCGGGGACTCCGTCTTCGTCGGCACTGCCTCGGGCTACTCGCTCTTCTCCACCACGAACGCCCAAGGTGGCGATATATTCACGCTCCCTGAGTCCTCCAGGCCACCCAGGG TGAAGCCCCTGTCCGGGGGCGACGAGGTCATGCTGCTCGTCGACAATGTCGGGGTCGTCGTGGACCGATCGGGGCATCCCGTTGGAAGCAGCTTCGTCTTTAACACCACGCCGGATTGTATAGCGGAGGTGTACCCCTATGTTGTTGTTGCCGGGGACTCCAAGGTAGATGTCTACAGAAGAAAGAACGGCGCACATTTGCAGGCTATTCCTTTTGCAAGGCCTGGTACAGGTGGACTAATTGTAGCGAGCGAGGATGCCGGAATTGGCAGCGACGTAGTTGTGATTGCTACGGCTTATAAGGTATTTTGCTACCGTAAAGTATCAGCGGTGGAACAGATCAAGGCACTACTACGAAGAAAGAGTTATGCAGAAGCTATTTCTTTGTTACAAGAGTTCGAGGCCGATGGGGAAATCTCAAATGACATGATTTCCTTTGTGCATGCACAACTTGGATTCTTGTTGTTTTTCGACTTGCGTTTCGAGGATGCTGTAAATCATTTCTTGCTCTCGGAAACTATGCAACCAGCAGAAATATTTCCATTCATCATGCGGGACCCTAATCGTTGGTCAGATCTGGTGCCAAGAAAGCGTTATTGGGGCTTGCATGCTCCCCCAAAGCCTCTTGAAGAAGTTATTGATGATGGGCTAGTAACACTTCAACAGGCATTGTTTCTCAAAAAGGCAGGTGTGGACACAGTTGTGGATGATGATTTCCTTTCAAATCCACCAAGCAGAGCTGATCTGCTGGAAGTAGCAATCAGAAATATTATCAGGTACCTGTGTGCATCCCGAGAGAAGGATTTATCTTCTTCAGAGATGGAAGGGGTTGATACTCTTCTGATGTATCCTTATAGAGCTCTCAATCTTGTTGATGACATGGAGAAGCTTGCATCATCTCAGAATAGCTGTGTTGTGGAGGAACTAGAATCACTTTTGGATGACTCTGGACATCTGCGGACGCTTGCATTCTTATATGGCAGTAAAGGAATGTGCTCCAAATCCCTTGGTATCTGGCGTATCTTAGCAAGGAATTACAGCACTGGTTTGTGGAAGGATCATGCAATCCTACCTGAAACTGACTCTCTTGAAACTTCTGTTGGTAAAATGTCTGGTGAGGAAATTGCTGCCGTTGAAGCCTCCAAGATACTCCAAGCATCATCTGATCAGGACTTTGTTCTGGAGCATCTTGGATGGGTGGCAGACATTGATCAAGAGCTTGCAACTGCAATTTTAACATCTGAAATGAGGGAAAAACAGCTTTCTCCTGAAAAGGTTGTTGCTGCCATTGATCCAGAGAAGGTTGGCATTCACCAAAGATATTTGCAATGGTTGATTGAGGAACAGGAATGTGATGAGCCTCACTATCACACGTCATATGCATTGTCCCTCTCCAGATCTGCCATGGACGCAGTCCGTTTGGGATCCAACAATGAAGAGAGAAACAATAAAGAATTTGATTCTGATATGCAGTTCATTTATCTATTGAGGGAAAGGTTGCAATTTTTTTTGCAATCGTCAGATTTGTATGACCCAGAAGAAGTGCTATATGTGATTTCAGAATCTGAGCTATGGCTGGAAAAGGCTATTTTGTATAGGAAGATGGGCCAAGAGAACATTGTACTTCAGATATTAGCGCTGAAACTGGAGGATAGTGAAGCTGCTGAGCAGTACTGTGCAGAGATTGGTCGAGATGATGCCTATATTCAGCTGTTGGATTTGTATCTGGACCCCAAAAATGGGAAAGGACCCATGTTTACAGCAGCCGTTCGACTTCTCCATAACCATGGGGAATCATTGGATCCAATACAAGTGTTGGAGAGATTATCTGCTGATATGCCTCTTCAGCTAGCATCAGATACAATTTTGCGAATGCTGAGAGCCCGGGTGCACCATCATCGTCAAGGGCAGGTAGTTCATAATTTATCACGCGCAACGAACCTTGATGCACGGTTGACCAGATTAGAGGAGAGGTCAAGGCATGTGCAGCTAACTGACGAGAGCATATGTGATTCATGTCGAGCTCGCCTTGGCACCAAGCTGTTTGTCATGTACCCAGATGACTCAGTTGTATGCTACAGGTGCTACCGAAATCAAGGTGATTCTGCATCTCCACATGGACGCAACTTCAGGAAAGGTGGTATATTTAAACAAAGCTGGCTCGTTAGTAGATAACAAAGTTACAAGACAAGGAAACCATGGATGTGCGTGCCTCTGTTTCAGTGCTATGCGTCATGAAAGGAGAGCATATATAATTTGGTGGTGAAGCCTCCCCTTTGCATTTGAAGGAGCATTCAGCAGCGATACGGTCTGAAACCATCTGAAATGAAGCATTATCGTTGATCATGGCGATTGGAGGGAGGCAGAGAGAGCAGTGGTCCTGGAAGGTGATACCGTAGCTTCCGGTGGTCGACCAGAAACCATGATGTTTTTTTGTCCATAGGATTGTTGTTTTGTTTTGATAGGATAAGATGGGCTACATAATTTTAGGTATCGCTAGGATTTAATTTACACTGTAGACAAAACATAAGGCCTTTTGTGTCTAATAGAAGAAAGAAAGATGGAGAGCATTTGCCC]
[+] EMBL AK103271             [                                                            CCAGCTATCTATGGCGTCCCCCTGCTCCCAACCCTAGCTCACCCATGGGATCCAACACTCCACCCTCCCGCGCCGCCCTCGAGCCCTTCGCCACCCTCGACCCCGCCGCCCTCGCCGGCCTCACAGCCTCCTCCCCGCTCACCGTCCGCTCCGCCGCCATCTCCTCCCCATACCTCTACCTCGGCACCGGCGGCGGCAAGCTCCTCCTCTTCACCCTCGATTCCCCCTCCCCCGACTTCCTCCGCCTCCTCCCCATCGGCCCCACCCGCCCCGTCTCCGCCATCCTCCCCCTCCCCGCCGTCGCCCGCCTCCTCCTCCTCGCCGACGGCCTCCTCCTCCTCGCGGACCCCCTCCTCTCCCGCCCCGTCCGCCGCCTCGGCTCCGTCCGCAACGTTGCCGCCGTCGCCGCCCGCGCCTCCGAATCCGACGATGATCGCCCCTCCTGCTCCCTCGCGGTCTCCGTCGGGAAGAAGCTGCTCCTCGTTGACCTCACCCTACACGACGCCGACGAGTTGGAGGTGCGGACGCGTGACATCGCCCTCGTCGATGGCGTCAAGGCGCTCGCTTGGGTCGGGGACTCCGTCTTCGTCGGCGCTGCCTCGGGCTACTCGCTCTTCTCCACCACGAACGCCCAAGGTGGCGATATATTCACGCTCCCTGAGTCCTCCAGGCCACCCAGGGCTGAAGCCCCTGTCCGGGGGCGACGAGGTCATGCTGCTCGTCGACAATGTCGGGGTCGTCGTGGACCGATCGGGGCATCCCGTTGGAAGCAGCTTCGTCTTTAACACCACGCCGGATTGTATAGCGGAGGTGTACCCCTATGTTGTTGTTGCCGGGGACTCCAAGGTAGATGTCTACAGAAGAAAGAACGGCGCACATTTGCAGGCTATTCCTTTTGCAAGGCCTGGTACAGGTGGACTAATTGTAGCGAGCGAGGATGCCGGAATTGGCAGCGACGTAGTTGTGATTGCTACGGCTTATAAGGTATTTTGCTACCGTAAAGTATCAGCGGTGGAACAGATCAAGGCACTACTACGAAGAAAGAGTTATGCAGAAGCTATTTCTTTGTTACAAGAGTTCGAGGCCGATGGGGAAATCTCAAATGACATGATTTCCTTTGTGCATGCACAACTTGGATTCTTGTTGTTTTTCGACTTGCGTTTCGAGGATGCTGTAAATCATTTCTTGCTCTCGGAAACTATGCAACCAGCAGAAATATTTCCATTCATCATGCGGGACCCTAATCGTTGGTCAGATCTGGTGCCAAGAAAGCGTTATTGGGGCTTGCATGCTCCCCCAAAGCCTCTTGAAGAAGTTATTGATGATGGGCTAGTAACACTTCAACAGGCATTGTTTCTCAAAAAGGCAGGTGTGGACACAGTTGTGGATGATGATTTCCTTTCAAATCCACCAAGCAGAGCTGATCTGCTGGAAGTAGCAATCAGAAATATTATCAGGTACCTGTGTGCATCCCGAGAGAAGGATTTATCTTCTTCAGAGATGGAAGGGGTTGATACTCTTCTGATGTATCTTTATAGAGCTCTCAATCTTGTTGATGACATGGAGAAGCTTGCATCATCTCAGAATAGCTGTGTTGTGGAGGAACTAGAATCACTTTTGGATGACTCTGGACATCTGCGGACGCTTGCATTCTTATATGGCAGTAAAGGAATGTGCTCCAAATCCCTTGGTATCTGGCGTATCTTAGCAAGGAATTACAGCACTGGTTTGTGGAAGGATCATGCAATCCTACCTGAAACTGACTCTCTTGAAACTTCTGTTGGTAAAATGTCTGGTGAGGAAATTGCTGCCGTTGAAGCCTCCAAGATACTTCAAGCATCATCTGATCAGGACCTTGTTCTGGAGCATCTTGGATGGGTGGCAGACATTGATCAAGAGCTTGCAACTGCAATTTTAACATCTGAAATGAGGGAAAAACAGCTTTCTCCTGAAAAGGTTGTTGCTGCCATTGATCCAGAGAAGGTTGGCATTCACCAAAGATATTTGCAATGGTTGATTGAGGAACAGGAATGTGATGAGCCTCACTATCACACGTCATATGCATTGTCCCTCTCCAGATCTGCCATGGACGCAGTCCGTTTGGGATCCAACAATGAAGAGAGAAACAATAAAGAATTTGATTCTGATATGCAGTTCATTTATCTATTGAGGGAAAGGTTGCAATTTTTTTTGCAATCGTCAGATTTGTATGACCCAGAAGAAGTGCTATATGTGATTTCAGAATCTGAGCTATGGCTGGAAAAGGCTATTTTGTATAGGAAGATGGGCCAAGAGAACATTGTACTTCAGATATTAGCGCTGAAACTGGAGGATAGTGAAGCTGCTGAGCAGTACTGTGCAGAGATTGGTCGAGATGATGCCTATATTCAGCTGTTGGATTTGTATCTGGACCCCAAAAATGGGAAAGGACCCATGTTTACAGCAGCCGTTCGACTTCTCCATAACCATGGGGAATCATTGGATCCAATACAAGTGTTGGAGAGATTATCTGCTGATATGCCTCTTCAGCTAGCATCAGATACAATTTTGCGAATGCTGAGAGCCCGGGTGCACCATCATCGTCAAGGGCAGGTAGTTCATAATTTATCACGCGCAACGAACCTTGATGCACGGTTGACCAGATTAGAGGAGAGGTCAAGGCATGTGCAGCTAACTGACGAGAGCATATGTGATTCATGTCGAGCTCGCCTTGGCACCAAGCTGTTTGTCATGTACCCAGATGACTCAGTTGTATGCTACAGGTGCTACCGAAATCAAGGTGATTCTGCATCTCCACATGGACGCAACTTCAGGAAAGGTGGTATATTTAAACAAAGCTGGCTCGTTAGTAGATAACAAAGTTACAAGACAAGGAAACCATGGATGTGCGTGCCTCTGTTTCAGTGCTATGCGTCATGAAAGGAGAGCATATATAATTTGGTGGTGAAGCCTCCCCTTTGCATTTGAAGGAGCATTCAGCAGCGATACGGTCTGAAACCATCTGAAATGAAGCATTATCGTTGATCATGGCGATTGGAGGGAGGCAGAGAGAGCAGTGGTCCTGGAAGGTGATACCGTAGCTTCCGGTGGTCGACCAGAAACCATGATGTTTTTTTGTCCATAGGATTGTTGTTTTGTTTTGATAGGATAAGATGGGCTACATAATTTTAGGTATCGCTAGGATTTAATTTACACTGTAGACAAAACATAAGGCCTTTTGTGTCTAATAGAAGAAAGAAA                  ]




>consensus_5319#0
TAGTAGTTGTTTGGTCGTCTTCTTCCTTCGACTCGAAGAGATCGATCACTCTAGTCTTCC
CCAGCTATCTATGGCGTCCCCCTGCTCCCAACCCTAGCTCACCCATGGGATCCAACACTC
CACCCTCCCGCGCCGCCCTCGAGCCCTTCGCCACCCTCGACCCCGCCGCCCTCGCCGGCC
TCCCAGCCTCCTCCCCGCTCACCGTCCGCTCCGCCGCCATCTCCTCCCCATACCTCTACC
TCGGCACCGGCGGCGGCAAGCTCCTCCTCTTCACCCTCGATTCCCCCTCCCCCGACTTCC
TCCGCCTCCTCCCCATCGGCCCCACCCGCCCCGTCTCCGCCATCCTCCCCCTCCCCGCCG
TCGCCCGCCTCCTCCTCCTCGCCGACGGCCTCCTCCTCCTCGCGGACCCCCTCCTCTCCC
GCCCCGTCCGCCGCCTCGGCTCCGTCCGCAACGTTGCCGCCGTCGCCGCCCGCGCCTCCG
AATCCGACGATGATCGCCCCTCCTGCTCCCTCGCGGTCTCCGTCGGGAGGAAGCTGCTCC
TCGTTGACCTCACCCTACACGACGCCGACGAGTTGGAGGTGCGGACGCGTGACATCGCCC
TCGTCGATGGCGTCAAGGCGCTCGCTTGGGTCGGGGACTCCGTCTTCGTCGGCACTGCCT
CGGGCTACTCGCTCTTCTCCACCACGAACGCCCAAGGTGGCGATATATTCACGCTCCCTG
AGTCCTCCAGGCCACCCAGGGTGAAGCCCCTGTCCGGGGGCGACGAGGTCATGCTGCTCG
TCGACAATGTCGGGGTCGTCGTGGACCGATCGGGGCATCCCGTTGGAAGCAGCTTCGTCT
TTAACACCACGCCGGATTGTATAGCGGAGGTGTACCCCTATGTTGTTGTTGCCGGGGACT
CCAAGGTAGATGTCTACAGAAGAAAGAACGGCGCACATTTGCAGGCTATTCCTTTTGCAA
GGCCTGGTACAGGTGGACTAATTGTAGCGAGCGAGGATGCCGGAATTGGCAGCGACGTAG
TTGTGATTGCTACGGCTTATAAGGTATTTTGCTACCGTAAAGTATCAGCGGTGGAACAGA
TCAAGGCACTACTACGAAGAAAGAGTTATGCAGAAGCTATTTCTTTGTTACAAGAGTTCG
AGGCCGATGGGGAAATCTCAAATGACATGATTTCCTTTGTGCATGCACAACTTGGATTCT
TGTTGTTTTTCGACTTGCGTTTCGAGGATGCTGTAAATCATTTCTTGCTCTCGGAAACTA
TGCAACCAGCAGAAATATTTCCATTCATCATGCGGGACCCTAATCGTTGGTCAGATCTGG
TGCCAAGAAAGCGTTATTGGGGCTTGCATGCTCCCCCAAAGCCTCTTGAAGAAGTTATTG
ATGATGGGCTAGTAACACTTCAACAGGCATTGTTTCTCAAAAAGGCAGGTGTGGACACAG
TTGTGGATGATGATTTCCTTTCAAATCCACCAAGCAGAGCTGATCTGCTGGAAGTAGCAA
TCAGAAATATTATCAGGTACCTGTGTGCATCCCGAGAGAAGGATTTATCTTCTTCAGAGA
TGGAAGGGGTTGATACTCTTCTGATGTATCCTTATAGAGCTCTCAATCTTGTTGATGACA
TGGAGAAGCTTGCATCATCTCAGAATAGCTGTGTTGTGGAGGAACTAGAATCACTTTTGG
ATGACTCTGGACATCTGCGGACGCTTGCATTCTTATATGGCAGTAAAGGAATGTGCTCCA
AATCCCTTGGTATCTGGCGTATCTTAGCAAGGAATTACAGCACTGGTTTGTGGAAGGATC
ATGCAATCCTACCTGAAACTGACTCTCTTGAAACTTCTGTTGGTAAAATGTCTGGTGAGG
AAATTGCTGCCGTTGAAGCCTCCAAGATACTCCAAGCATCATCTGATCAGGACTTTGTTC
TGGAGCATCTTGGATGGGTGGCAGACATTGATCAAGAGCTTGCAACTGCAATTTTAACAT
CTGAAATGAGGGAAAAACAGCTTTCTCCTGAAAAGGTTGTTGCTGCCATTGATCCAGAGA
AGGTTGGCATTCACCAAAGATATTTGCAATGGTTGATTGAGGAACAGGAATGTGATGAGC
CTCACTATCACACGTCATATGCATTGTCCCTCTCCAGATCTGCCATGGACGCAGTCCGTT
TGGGATCCAACAATGAAGAGAGAAACAATAAAGAATTTGATTCTGATATGCAGTTCATTT
ATCTATTGAGGGAAAGGTTGCAATTTTTTTTGCAATCGTCAGATTTGTATGACCCAGAAG
AAGTGCTATATGTGATTTCAGAATCTGAGCTATGGCTGGAAAAGGCTATTTTGTATAGGA
AGATGGGCCAAGAGAACATTGTACTTCAGATATTAGCGCTGAAACTGGAGGATAGTGAAG
CTGCTGAGCAGTACTGTGCAGAGATTGGTCGAGATGATGCCTATATTCAGCTGTTGGATT
TGTATCTGGACCCCAAAAATGGGAAAGGACCCATGTTTACAGCAGCCGTTCGACTTCTCC
ATAACCATGGGGAATCATTGGATCCAATACAAGTGTTGGAGAGATTATCTGCTGATATGC
CTCTTCAGCTAGCATCAGATACAATTTTGCGAATGCTGAGAGCCCGGGTGCACCATCATC
GTCAAGGGCAGGTAGTTCATAATTTATCACGCGCAACGAACCTTGATGCACGGTTGACCA
GATTAGAGGAGAGGTCAAGGCATGTGCAGCTAACTGACGAGAGCATATGTGATTCATGTC
GAGCTCGCCTTGGCACCAAGCTGTTTGTCATGTACCCAGATGACTCAGTTGTATGCTACA
GGTGCTACCGAAATCAAGGTGATTCTGCATCTCCACATGGACGCAACTTCAGGAAAGGTG
GTATATTTAAACAAAGCTGGCTCGTTAGTAGATAACAAAGTTACAAGACAAGGAAACCAT
GGATGTGCGTGCCTCTGTTTCAGTGCTATGCGTCATGAAAGGAGAGCATATATAATTTGG
TGGTGAAGCCTCCCCTTTGCATTTGAAGGAGCATTCAGCAGCGATACGGTCTGAAACCAT
CTGAAATGAAGCATTATCGTTGATCATGGCGATTGGAGGGAGGCAGAGAGAGCAGTGGTC
CTGGAAGGTGATACCGTAGCTTCCGGTGGTCGACCAGAAACCATGATGTTTTTTTGTCCA
TAGGATTGTTGTTTTGTTTTGATAGGATAAGATGGGCTACATAATTTTAGGTATCGCTAG
GATTTAATTTACACTGTAGACAAAACATAAGGCCTTTTGTGTCTAATAGAAGAAAGAAAG
ATGGAGAGCATTTGCCC

consensusID : consensus_5319#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 313
fasta sequence 
                              [TTTTTTTTTTGTGAAGATTTGAATGAATTTCGGGATAAAGAGTTGTATATCTCTCGCCAACAACAAATGTCACCAACTAACCAAAGTTGTTAGACTTGTTGGTGGACTCCTCTAATCTAATCGGAGTTAACACTTGTTACAAGAGAGAAGAGACTAGTAGTTGTTTGGTCGTCTTCTTCCTTCGACTCGACGATATCGATCACTCTAGGTCTTCCCCAGACTATCTATGGCGTCCCCCTGCTCCCAACCCTAGCTCACCCATGGGATCCAAGCATCCACCTCACCGGCCGGCCTCTGATGGCCCTTCAGCACG]

[-] EMBL BI800878             [TTTTTTTTTTGTGAAGATTTGAATGAATTTCGGGATAAAGAGTTGTATATCTCTCGCCAACAACAAATGTCACCAACTAACCAAAGTTGTTAGACTTGTTGGTGGACTCCTCTAATCTAATCGGAGTTAACACTTGTTACAAGAGAGAAGAGACTAGTAGTTGTTTGGTCGTCTTCTTCCTTCGACTCGACGATATCGATCACTCTAGGTCTTCCCCAGACTATCTATGGCGTCCCCCTGCTCCCAACCCTAGCTCACCCATGGGATCCAAGCATCCACCTCACCGGCCGGCCTCTGATGGCCCTTCAGCACG]




>consensus_5319#1
TTTTTTTTTTGTGAAGATTTGAATGAATTTCGGGATAAAGAGTTGTATATCTCTCGCCAA
CAACAAATGTCACCAACTAACCAAAGTTGTTAGACTTGTTGGTGGACTCCTCTAATCTAA
TCGGAGTTAACACTTGTTACAAGAGAGAAGAGACTAGTAGTTGTTTGGTCGTCTTCTTCC
TTCGACTCGACGATATCGATCACTCTAGGTCTTCCCCAGACTATCTATGGCGTCCCCCTG
CTCCCAACCCTAGCTCACCCATGGGATCCAAGCATCCACCTCACCGGCCGGCCTCTGATG
GCCCTTCAGCACG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5319#0      TAGTAGTTGTTTGGTCGTCTTCTTCCTTCGACTCGAAGAGATCGATCACTCTAGTCTTCC 60
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      CCAGCTATCTATGGCGTCCCCCTGCTCCCAACCCTAGCTCACCCATGGGATCCAACACTC 120
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      CACCCTCCCGCGCCGCCCTCGAGCCCTTCGCCACCCTCGACCCCGCCGCCCTCGCCGGCC 180
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      TCCCAGCCTCCTCCCCGCTCACCGTCCGCTCCGCCGCCATCTCCTCCCCATACCTCTACC 240
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      TCGGCACCGGCGGCGGCAAGCTCCTCCTCTTCACCCTCGATTCCCCCTCCCCCGACTTCC 300
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      TCCGCCTCCTCCCCATCGGCCCCACCCGCCCCGTCTCCGCCATCCTCCCCCTCCCCGCCG 360
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      TCGCCCGCCTCCTCCTCCTCGCCGACGGCCTCCTCCTCCTCGCGGACCCCCTCCTCTCCC 420
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      GCCCCGTCCGCCGCCTCGGCTCCGTCCGCAACGTTGCCGCCGTCGCCGCCCGCGCCTCCG 480
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      AATCCGACGATGATCGCCCCTCCTGCTCCCTCGCGGTCTCCGTCGGGAGGAAGCTGCTCC 540
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      TCGTTGACCTCACCCTACACGACGCCGACGAGTTGGAGGTGCGGACGCGTGACATCGCCC 600
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      TCGTCGATGGCGTCAAGGCGCTCGCTTGGGTCGGGGACTCCGTCTTCGTCGGCACTGCCT 660
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      CGGGCTACTCGCTCTTCTCCACCACGAACGCCCAAGGTGGCGATATATTCACGCTCCCTG 720
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      AGTCCTCCAGGCCACCCAGGGTGAAGCCCCTGTCCGGGGGCGACGAGGTCATGCTGCTCG 780
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      TCGACAATGTCGGGGTCGTCGTGGACCGATCGGGGCATCCCGTTGGAAGCAGCTTCGTCT 840
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      TTAACACCACGCCGGATTGTATAGCGGAGGTGTACCCCTATGTTGTTGTTGCCGGGGACT 900
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      CCAAGGTAGATGTCTACAGAAGAAAGAACGGCGCACATTTGCAGGCTATTCCTTTTGCAA 960
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      GGCCTGGTACAGGTGGACTAATTGTAGCGAGCGAGGATGCCGGAATTGGCAGCGACGTAG 1020
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      TTGTGATTGCTACGGCTTATAAGGTATTTTGCTACCGTAAAGTATCAGCGGTGGAACAGA 1080
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      TCAAGGCACTACTACGAAGAAAGAGTTATGCAGAAGCTATTTCTTTGTTACAAGAGTTCG 1140
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      AGGCCGATGGGGAAATCTCAAATGACATGATTTCCTTTGTGCATGCACAACTTGGATTCT 1200
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      TGTTGTTTTTCGACTTGCGTTTCGAGGATGCTGTAAATCATTTCTTGCTCTCGGAAACTA 1260
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      TGCAACCAGCAGAAATATTTCCATTCATCATGCGGGACCCTAATCGTTGGTCAGATCTGG 1320
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      TGCCAAGAAAGCGTTATTGGGGCTTGCATGCTCCCCCAAAGCCTCTTGAAGAAGTTATTG 1380
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      ATGATGGGCTAGTAACACTTCAACAGGCATTGTTTCTCAAAAAGGCAGGTGTGGACACAG 1440
consensus_5319#1      --------------------------------TTTTTTTTTTGTGAAGATTTGAATGAAT 28
                                                      *** *       * ** * ** *   * 

consensus_5319#0      TTGTGGATGATGATTTCCTTTCAAATCCACCA-AGCAGAGCTGATCTGCTGGAAGTAGCA 1499
consensus_5319#1      TTCGGGATAAAGAGTTGTATATCTCTCGCCAACAACAAATGTCACCAACTAACCAAAGTT 88
                      **  **** * ** **   *     **  * * * ** *  * * *  **      **  

consensus_5319#0      ATCAGAAATATTATCAGGTACCTGTGTGCATCCCGAGAGAAGGATTTATCTTCTTCAGAG 1559
consensus_5319#1      GTTAGACTTGTTGGTGGACTCCTCTAATCTAATCGGAGTTAACACTTGT-----TACAAG 143
                       * ***  * **    *   *** *   *    **     *  * ** *     *   **

consensus_5319#0      ATGGAAGGGGTTGATACTCTTCTGATGTATCCTTATAGAGCTCTCAATCTTGTTGATGAC 1619
consensus_5319#1      AGAGAAGAGACTAGTAGTTGTTTGGT-CGTCTTCTT----CCTTCGAC----TCGACGAT 194
                      *  **** *  *  ** *  * ** *   ** *  *    *  ** *     * ** ** 

consensus_5319#0      ATGGAGAAGCTTGCATCATCTC-AGAATAGCTGTGTTGTGGAGGAACTAGAATCACTTTT 1678
consensus_5319#1      ATCGATCACTCTAGGTCTTCCCCAGACTATCTATGGCGTCCCC---CTGCTCCCAACCCT 251
                      ** **  *   *   ** ** * *** ** ** **  **       **     **    *

consensus_5319#0      GGATGACTCTGGACATCTGCGGACGCTTGCATTCTTATATGGCAGTAAAGGAATGTGCTC 1738
consensus_5319#1      AGCTCACCCATGGGATC--CAAGCATCCACCTCACCGGCCGGCCTCTGATGGCCCTTCAG 309
                       * * ** *  *  ***  *   *     * *        ***     * *    * *  

consensus_5319#0      CAAATCCCTTGGTATCTGGCGTATCTTAGCAAGGAATTACAGCACTGGTTTGTGGAAGGA 1798
consensus_5319#1      CACG-------------------------------------------------------- 313
                      **                                                          

consensus_5319#0      TCATGCAATCCTACCTGAAACTGACTCTCTTGAAACTTCTGTTGGTAAAATGTCTGGTGA 1858
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      GGAAATTGCTGCCGTTGAAGCCTCCAAGATACTCCAAGCATCATCTGATCAGGACTTTGT 1918
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      TCTGGAGCATCTTGGATGGGTGGCAGACATTGATCAAGAGCTTGCAACTGCAATTTTAAC 1978
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      ATCTGAAATGAGGGAAAAACAGCTTTCTCCTGAAAAGGTTGTTGCTGCCATTGATCCAGA 2038
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      GAAGGTTGGCATTCACCAAAGATATTTGCAATGGTTGATTGAGGAACAGGAATGTGATGA 2098
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      GCCTCACTATCACACGTCATATGCATTGTCCCTCTCCAGATCTGCCATGGACGCAGTCCG 2158
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      TTTGGGATCCAACAATGAAGAGAGAAACAATAAAGAATTTGATTCTGATATGCAGTTCAT 2218
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      TTATCTATTGAGGGAAAGGTTGCAATTTTTTTTGCAATCGTCAGATTTGTATGACCCAGA 2278
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      AGAAGTGCTATATGTGATTTCAGAATCTGAGCTATGGCTGGAAAAGGCTATTTTGTATAG 2338
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      GAAGATGGGCCAAGAGAACATTGTACTTCAGATATTAGCGCTGAAACTGGAGGATAGTGA 2398
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      AGCTGCTGAGCAGTACTGTGCAGAGATTGGTCGAGATGATGCCTATATTCAGCTGTTGGA 2458
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      TTTGTATCTGGACCCCAAAAATGGGAAAGGACCCATGTTTACAGCAGCCGTTCGACTTCT 2518
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      CCATAACCATGGGGAATCATTGGATCCAATACAAGTGTTGGAGAGATTATCTGCTGATAT 2578
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      GCCTCTTCAGCTAGCATCAGATACAATTTTGCGAATGCTGAGAGCCCGGGTGCACCATCA 2638
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      TCGTCAAGGGCAGGTAGTTCATAATTTATCACGCGCAACGAACCTTGATGCACGGTTGAC 2698
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      CAGATTAGAGGAGAGGTCAAGGCATGTGCAGCTAACTGACGAGAGCATATGTGATTCATG 2758
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      TCGAGCTCGCCTTGGCACCAAGCTGTTTGTCATGTACCCAGATGACTCAGTTGTATGCTA 2818
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      CAGGTGCTACCGAAATCAAGGTGATTCTGCATCTCCACATGGACGCAACTTCAGGAAAGG 2878
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      TGGTATATTTAAACAAAGCTGGCTCGTTAGTAGATAACAAAGTTACAAGACAAGGAAACC 2938
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      ATGGATGTGCGTGCCTCTGTTTCAGTGCTATGCGTCATGAAAGGAGAGCATATATAATTT 2998
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      GGTGGTGAAGCCTCCCCTTTGCATTTGAAGGAGCATTCAGCAGCGATACGGTCTGAAACC 3058
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      ATCTGAAATGAAGCATTATCGTTGATCATGGCGATTGGAGGGAGGCAGAGAGAGCAGTGG 3118
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      TCCTGGAAGGTGATACCGTAGCTTCCGGTGGTCGACCAGAAACCATGATGTTTTTTTGTC 3178
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      CATAGGATTGTTGTTTTGTTTTGATAGGATAAGATGGGCTACATAATTTTAGGTATCGCT 3238
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      AGGATTTAATTTACACTGTAGACAAAACATAAGGCCTTTTGTGTCTAATAGAAGAAAGAA 3298
consensus_5319#1      ------------------------------------------------------------
                                                                                  

consensus_5319#0      AGATGGAGAGCATTTGCCC 3317
consensus_5319#1      -------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)