cluster # 5329

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Oryza sativa
cluster # 5329 cluster # 5329 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5329#0 length = 601 sequences # 3

consensusID : consensus_5329#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 601
fasta sequence

                              [GGTGGGTGTCGCGCGCAAGGCGTTCGACGGAATGCCGCAGCCGAGACCTACGTCCCAGGCTCCGGCAAGTACATCGCCCCGGACTACCTCGTGAAGAAGGTGACGGCCAAGGAACTGGAGGAGCTGGTGAGGGGGGAGAGGAAGGTGCCCCTCATCGTGGATTTCTACGCGACGTGGTGCGGACCCTGCGTCCTCATGGCCCAGGACATCGAGATGCTTGCAGTTGAATATGAAAACAATGCCCTGTTTGTGAAGGTGGATACTGATGATGAATATGAACTTGCAAGAGATATGCAGGTAAGAGGACTTCCAACACTGTATTTCTTCAGTCCAGATCAAAGCAAAGACGCCCTAAGGACTGAGGGACTGATTCCTATTGATATGATCAGAAATATCATTGATAATGAATTGTGATCGCTAGGATATAGGGACATAGTTGAGATTTTGATGTTTGAAGTATTTTAGCCACTAGTAGATGTGATAGATTTGAGCTTTCTGATCTTTAGTGGGAAGGTTCTGAATCTTCTGGTACGCAGAGTCTGCGTGTGGAATGTAGTATGTTATATGTGGGGTTCGTGCTTCAGACTAACAAGCTACTCTA]

[+] EMBL AK066851             [GGTGGGTGTCGCGCGCAAGGCGTTCGACGGAATGCCGCAGCCGAGACCTACGTCCCAGGCTCCGGCAAGTACATCGCCCCGGACTACCTCGTGAAGAAGGTGACGGCCAAGGAACTGGAGGAGCTGGTGAGGGGGGAGAGGAAGGTGCCCCTCATCGTGGATTTCTACGCGACGTGGTGCGGACCCTGCGTCCTCATGGCCCAGGACATCGAGATGCTTGCAGTTGAATATGAAAACAATGCCCTGTTTGTGAAGGTGGATACTGATGATGAATATGAACTTGCAAGAGATATGCAGGTAAGAGGACTTCCAACACTGTATTTCTTCAGTCCAGATCAAAGCAAAGACGCCCTAAGGACTGAGGGACTGATTCCTATTGATATGATCAGAAATATCATTGATAATGAATTGTGATCGCTAGGATATAGGGACATAGTTGAGATTTTGATGTTTGAAGTATTTTAGCCACTAGTAGATGTGATAGATTTGAGCTTTCTGATCTTTAGTGGGAAGGTTCTGAATCTTCTGGTACGCAGAGTCTGCGTGTGGAATGTAGTATGTTATATGTGGGGTTCGTGCTTCAGACTAACAAGCTACTCTA]
[+] EMBL AK058590             [GGTGGGTGTCGCGCGCAAGGCGTTCGACGGAATGCCGCAGCCGAGACCTACGTCCCAGGCTCCGGCAAGTACATCGCCCCGGACTACCTCGTGAAGAAGGTGACGGCCAAGGAACTGGAGGAGCTGGTGAGGGGGGAGAGGAAGGTGCCCCTCATCGTGGATTTCTACGCGACGTGGTGCGGACCCTGCGTCCTCATGGCCCAGGACATCGAGATGCTTGCAGTTGAATATGAAAACAATGCCCTGTTTGTGAAGGTGGATACTGATGATGAATATGAACTTGCAAGAGATATGCAGGTAAGAGGACTTCCAACACTGTATTTCTTCAGTCCAGATCAAAGCAAAGACGCCCTAAGGACTGAGGGACTGATTCCTATTGATATGATCAGAAATATCATTGATAATGAATTGTGATCGCTAGGATATAGGGACATAGTTGAGATT                                                                                                                                                             ]
[+] EMBL CA998133             [                                                                                                                                                          TCGTGGATTTCTACGCGACGTGGTGCGGACCCTGCGTCCTCATGGCCCAGGACATCGAGATGCTTGCAGTTGAATATGAAAACAATGCCCTGTTTGTGAAGGTGGATACTGATGATGAATATGAACTTGCAAGAGATATGCAGGTAAGAGGACTTCCAACACTGT                                                                                                                                                                                                                                                                                          ]




>consensus_5329#0
GGTGGGTGTCGCGCGCAAGGCGTTCGACGGAATGCCGCAGCCGAGACCTACGTCCCAGGC
TCCGGCAAGTACATCGCCCCGGACTACCTCGTGAAGAAGGTGACGGCCAAGGAACTGGAG
GAGCTGGTGAGGGGGGAGAGGAAGGTGCCCCTCATCGTGGATTTCTACGCGACGTGGTGC
GGACCCTGCGTCCTCATGGCCCAGGACATCGAGATGCTTGCAGTTGAATATGAAAACAAT
GCCCTGTTTGTGAAGGTGGATACTGATGATGAATATGAACTTGCAAGAGATATGCAGGTA
AGAGGACTTCCAACACTGTATTTCTTCAGTCCAGATCAAAGCAAAGACGCCCTAAGGACT
GAGGGACTGATTCCTATTGATATGATCAGAAATATCATTGATAATGAATTGTGATCGCTA
GGATATAGGGACATAGTTGAGATTTTGATGTTTGAAGTATTTTAGCCACTAGTAGATGTG
ATAGATTTGAGCTTTCTGATCTTTAGTGGGAAGGTTCTGAATCTTCTGGTACGCAGAGTC
TGCGTGTGGAATGTAGTATGTTATATGTGGGGTTCGTGCTTCAGACTAACAAGCTACTCT
A

clustalw multiple alignements is not computed in this case