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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5334 cluster # 5334       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5334#0 length = 589 sequences # 3  

consensusID : consensus_5334#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 589
fasta sequence
                              [GTTGAAACTTGCTGTGCCCCTTTTAGGCTGCTGGTTCTAACCCTTGACCTAAACATTTGCAAAATTGACTGCATATGTTCTGTTGCTATTTTGACGGACTATTGTAATTTATGTTCGTCCTGCATTTTGAAAACATGGAAGCTTGACATAATACAATAAAAGTTTGCCAAATAACTGGAAAACACCAGATTCAATGAACCGATGGGATCTAGTTTATTGTTGGGAAGCCTGGGATAAGGGTGGTCTGCCAGCAAAGCTTGTGGATGCATCAGGCATGTAGTAGATAAGCACAGATACATACAGTATAACTCAATCAGTGTACTGCAAACTATAAATCCCAAGGGCCAAGGCATCCTCAAGAACCTGGATAGCCATAATTTCTATATTAAGAGAAAATGTTAGGCACTTAAAAGGCACTGCATTTCCTGAAGAAATAACTACTGTTGAGCAGTGACTCTATCATTCCTGCTTTGTTAATTATCCAAGTGATAGCTTTGCATAGAGGAAAATCATTTTCCAATTTGAATGTATCTTATTTCAGTTTTCCATGTCATTTAATTTTGAAAAGCAATTCAACGATGGCCCTAGT]

[+] EMBL CA998231             [GTTGAAACTTGCTGTGCCCCTTTTAGGCTGCTGGTTCTAAGCCTTGACCTAAACATTTGCAAAATTGACTGCATATGTTCTGTTGCTATTTTGACGGACTATTGTAATTTATGTTCGTCCTGCATTTTGAAAACATGGAAGCTTGACATAATACAATAAAAGTTTGCCAAATAACTGGAAAACACCAGATTCAATGAACCGATGGGATCTAGTTTATTGTTGGGAAGCCTGGGATAAGGGTGGTCTGCCAGCAAAGCTTGTGGATGCATCAGGCATGTAGTAGATAAGCACAGATACATACAGTATAACTCAATCAGTGTACTGCAAACTATAAATCCCAAGGGCCAAGGCATCCTCAAGAACCTGGATAGCCATAATTTCTATATTAAGAGAAAATGTTAGGCACTTAAAAGGCACTGCATTTCCTGAAGAAATAACTACTGTTGAGCAGTGACTCTATCATTCCTGCTTTGTTAATTATCCAAGTGATAGCTTTGCATAGAGGAAAATCATTTTCCAATTTGAATGTATCTTATTTCAGTTTTCCATGTCATTTAATTTTGAAAAGCAATTCAACGATGGCCCTAGT]
[+] EMBL CB000930             [GTTGAAACTTGCTGTGCCCCTTTTAGGCTGCTGGTTCTAACCCTTGACCTAAATA TTGCAAAATTGTCTGCATATGTTCTGTTGCTATTTTGACGGACTATTGTAATTTATGTTCGTCCTGCATTTTGAAAACATGGAAGCTTGACATAATACAATAAAAGTTTGCCAAATAACTGGAAAACACCAGATTCAATGAACCGATGGGATCTAGTTTATTGTTGGGAAGCCTGGGATAAGGGTTTTCTGCCAGCAAAGCTTGTGGATGTTTCAGGCATGTAGTAGATAAGCACAGATACATACAGTATAACTCAATCAGTGTACTGCAAACTATAAATCCCAAGGGCCAAGGCATCCTCAAGAACCTGGATAGCCATAATTTCTATATTAAGAGAAAATGTTAGGCACTTAAAAGGCACTGCATTTCCTGAAGAAATAACTACTGTTGAGCAGTGACTCTATCAT                                                                                                                              ]
[+] EMBL CA998774             [      ACTTGCTGTGCCCCTTTTAGGCTGCTGTTTCTAACCCTTGACCTAAACATTTGCAAAATTGACTGCATATGTTCTGTTGCTATTTTGACGGACTATTGTAATTTATGTTCGTCCTGCATTTTGAAAACATGGAAGCTTGACATAATACAATAAAAGTTTGCCAAATAACTGGAAAACACCAGATTCCATGAACCGATGGGATCTAGTTTATTGg                                                                                                                                                                                                                                                                                                                                                                                 ]


>consensus_5334#0 GTTGAAACTTGCTGTGCCCCTTTTAGGCTGCTGGTTCTAACCCTTGACCTAAACATTTGC AAAATTGACTGCATATGTTCTGTTGCTATTTTGACGGACTATTGTAATTTATGTTCGTCC TGCATTTTGAAAACATGGAAGCTTGACATAATACAATAAAAGTTTGCCAAATAACTGGAA AACACCAGATTCAATGAACCGATGGGATCTAGTTTATTGTTGGGAAGCCTGGGATAAGGG TGGTCTGCCAGCAAAGCTTGTGGATGCATCAGGCATGTAGTAGATAAGCACAGATACATA CAGTATAACTCAATCAGTGTACTGCAAACTATAAATCCCAAGGGCCAAGGCATCCTCAAG AACCTGGATAGCCATAATTTCTATATTAAGAGAAAATGTTAGGCACTTAAAAGGCACTGC ATTTCCTGAAGAAATAACTACTGTTGAGCAGTGACTCTATCATTCCTGCTTTGTTAATTA TCCAAGTGATAGCTTTGCATAGAGGAAAATCATTTTCCAATTTGAATGTATCTTATTTCA GTTTTCCATGTCATTTAATTTTGAAAAGCAATTCAACGATGGCCCTAGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)