cluster # 5346

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Oryza sativa
cluster # 5346 cluster # 5346 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5346#0 length = 723 sequences # 3

consensusID : consensus_5346#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 723
fasta sequence

                              [TTTTTTTTTTTTTTTTTTTNAGCCAAAGGCACTGTTCTACCTTTTTTTTTAATCTTTTGNCCCTCTTTACATGATCTAANAAATGANAAAGGGGNAATTTTTTCTTCTCTTTTTTTTTTTACCCTAGTCTGACTGACGGATGAACATGATATGAGCTGATGAATCGGTAGTTTCANAGTCTTNTTTCCTCCTGCAATTGCCTGCANATTTTGCAGCANATGGATTGGGGCACTGGAGGAGTANAGGTTGCAGCTAGCTAANAGGAAGGAGGCCGCTGNGGCCGGCGGTAGCCGAGCTCCATGACNAACTCCTTGGCTTGAGCGCCCAGCGACGCCTGGACCTGCTCCACCGGCGAGCTCTTCAGCCACAGCTCGAGCAGGCCTTGCAATGTGGTCGAGGGGGAGATTGCCTCGCCATGGCATGTGATCTCCACCTCATCTTCACTTGCTAGGTCAAGCTTATTCATGATGTACCTCTGGATCAAGGAAGTCTGCAGACTTCCATCTTTAATTCTCACGTAATATGTTGGTAGCTGAGGCAGCCTGGGATCTTGTTTCTGGTCAGGTGAAGGGACAAGCAAAAACCATACTGGTCTAGTTATTCCATCATGCAAAGCACCAGTTCTTGTAGAACCAATCTGTCCCTGCTGTGAATCAGCATGTTGTCCTTTCCTCAGCTCATAGTCTGAGGTGGTTTTATCTTTCGATGATGCAGATTGTGAAG]

[-] EMBL AU173894             [TTTTTTTTTTTTTTTTTTTNAGCCAAAGGCACTGTTCTACCTTTTTTTTTAATCTTTTGNCCCTCTTTACATGATCTAANAAATGANAAAGGGGNAATTTTTTCTTCTCTTTTTTTTTTTACCCTAGTCTGACTGACGGATGAACATGATATGAGCTGATGAATCGGTAGTTTCANAGTCTTNTTTCCTCCTGCAATTGCCTGCANATTTTGCAGCANATGGATTGGGGCACTGGAGGAGTANAGGTTGCAGCTAGCTAANAGGAAGGAGGCCGCTGNGGCCGGCGGTAGCCGAGCTCCATGACNAACTCCTTGGCTTGAGCGCCCAGCGACGCCTGGACCTG                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF310127             [                                                                                                         ttttTTTTTTTTTTTACCCTAGTCTGACTGACGGATGAACATGATATGAGCTGATGAATCGGTAGTTTCAGAGTCTTCTTTCCTCCTGCAATTGCCTGCAGATTTTGCAGCAGATGGATTGTGGCACTGGAGGAGTAGAGGTTGCAGCTAGCTAAAAGGAAGGAGGCCGCTGTGGCCGGCGGTAGCCGAGCTCCATGACGAACTCCTTGGCTTGAGCGCCCAGCGACGCCTGGACCTGCTCCACCGGCGAGCTCTTCAGCCACAGCTCGAGCAGGCCTTGCAATGTGGTCGAGGGGGAGATTGCCTCGCCATGGCATGTGATCTCCACCTCATCTTCACTTGCTAGGTCAAGCTTATTCATGATGTACCTCTGGATCAAGGAAGTCTGCAGACTTCCATCTTTAATTCTCACGTAATATGTTGGTAGCTGAGGCAGCCTGGGATCTTGTTTCTGGTCAGGTGAAGGGACAAGCAAAAACCATACTGGTCTAGTTATTCCATCAT                                                                                                                  ]
[-] EMBL CF310126             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGTTGGTAGCTGAGGCAGCCTGGGATCTTGTTTCTGGTCAGGTGAAGGGACAAGCAAAAACCATACTGGTCTAGTTATTCCATCATGCAAAGCACCAGTTCTTGTAGAACCAATCTGTCCCTGCTGTGAATCAGCATGTTGTCCTTTCCTCAGCTCATAGTCTGAGGTGGTTTTATCTTTCGATGATGCAGATTGTGAAG]




>consensus_5346#0
TTTTTTTTTTTTTTTTTTTNAGCCAAAGGCACTGTTCTACCTTTTTTTTTAATCTTTTGN
CCCTCTTTACATGATCTAANAAATGANAAAGGGGNAATTTTTTCTTCTCTTTTTTTTTTT
ACCCTAGTCTGACTGACGGATGAACATGATATGAGCTGATGAATCGGTAGTTTCANAGTC
TTNTTTCCTCCTGCAATTGCCTGCANATTTTGCAGCANATGGATTGGGGCACTGGAGGAG
TANAGGTTGCAGCTAGCTAANAGGAAGGAGGCCGCTGNGGCCGGCGGTAGCCGAGCTCCA
TGACNAACTCCTTGGCTTGAGCGCCCAGCGACGCCTGGACCTGCTCCACCGGCGAGCTCT
TCAGCCACAGCTCGAGCAGGCCTTGCAATGTGGTCGAGGGGGAGATTGCCTCGCCATGGC
ATGTGATCTCCACCTCATCTTCACTTGCTAGGTCAAGCTTATTCATGATGTACCTCTGGA
TCAAGGAAGTCTGCAGACTTCCATCTTTAATTCTCACGTAATATGTTGGTAGCTGAGGCA
GCCTGGGATCTTGTTTCTGGTCAGGTGAAGGGACAAGCAAAAACCATACTGGTCTAGTTA
TTCCATCATGCAAAGCACCAGTTCTTGTAGAACCAATCTGTCCCTGCTGTGAATCAGCAT
GTTGTCCTTTCCTCAGCTCATAGTCTGAGGTGGTTTTATCTTTCGATGATGCAGATTGTG
AAG

clustalw multiple alignements is not computed in this case