cluster # 5347

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Oryza sativa
cluster # 5347 cluster # 5347 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5347#0 length = 477 sequences # 3

consensusID : consensus_5347#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 477
fasta sequence

                              [GCGGTGTTTGTGTTGATGATGGCCGTGCAGGCGCAGTACGTCGCCCACGCCTCCCGCTCCTCCTCCTCCGCGGCGTACGCCATCAGGCCGGCTCTGGAGAACGCGGCGCCGAGCAGCGGCGCATCGGCGTTGTTCCTGGACGAGGCCGTCTCAGCGGCGCTGCTACAGCAGCAGCTTGTTGTTGCTGCTGCGGCGGTGGGCGGC-GGCGGCAACAACAACAACACGGCGGTGTTCAGTGACCTGCGAAGCGA-GCTTACTTGTAGCCAGCGCCGCTTTGACGACTTCGGCGGCGGCTTCGTGCCGCGGAAGCGCGCGCGGGTTGGC-GGCGAGGGAGAGGCGGCGGCGGGTCTGTTGATGAGCAGCAGCGTCATGGAGNGCGGCGGGCACC-CGCGCTGTTGCCGCCGCCACCGCCGCA-GTGACGCCGCAG--TTNCGCGGGACGTGCACAAGAGTAGCAGCAGGGTCGTCGGCTCCGGCGCG]

[+] EMBL AU101053             [GCGGTGTTTGTGTTGATGATGGCCGTGCAGGCGCAGTACGTCGCCCACGCCTCCCGCTCCTCCTCCTCCGCGGCGTACGCCATCAGGCCGGCTCTGGAGAACGCGGCGCCGAGCAGCGGCGCATCGGCGTTGTTCCTGGACGAGGCCGTCTCAGCGGCGCTGCTACAGCAGCAGCTTGTTGTTGCTGCTGCGGCGGTGGGCGGCNGGCGGCAACAACAACAACACGGCGGTGTTCAGTGACCTGCGAAGCGA GCTTACTTGTAGCCAGCGCCGCTTTGACGACTTCGGCGGCGGCTTCGTGCCGCGGAAGCGCGCGCGGGTTGGCTGGNGAGGGAGAGGCGGNGGCGGGTCTGTTGATGAGCAGCAGCGTt                                                                                                                ]
[+] EMBL AU070185             [                                                                                                      GCGGCGCCGAGCAGCGGCNAGTCGGCGTTGTTCCTGGACGAGGCCGTCTCAGCGGCGCTGCTACAGCAGCAGCTTGTTGTTGCTGCTGCGGCGGTGGGCGGC GGCGGCAACAACAACAACACGGCGGTGTTCAGTGACCTGCGAA CGANGCTTACTTGTAGCCAGCGCCGCTTTGACGACTTCGGCGGCGGCTTCGTGCCGCGGAAGCGCGCGCGGGTTGGC GGCGAGGGAGAGGCGGCGGCGGGTCTGTTGATGAGCAGCAGCGTCATGGAGNGCGGCGGGCACC CGCGCTGTTGCCGCCGCCACCGCCGCA GTGACGCCGCAG  TTNCGCGGGACGTGCACAAGAGTAGCAGCAGGGTCGTCGGCTCCGGCGCG]
[+] EMBL AU101054             [                                                                                                                                                                                  TTGTTGCTGCTGCGNCGGTGGGCGGC GGCGGCAACAACAACAACACGGCGGTGTTCAGTGACCTGCGAAGCGA GCTTACTTGTAGCCAGCGCCGCTTTGACGACTTCGGCGGCGGCTTCGTGCCGCGGAAGCGCGCGCGGGTTGGC GGCGAGGGAGAGGCGGCGGCGGGTCTGTTGATGAGCAGCAGCGTCATGGAGGGCGGCGGGCACCGCGCGCTGTTGCCGCCGCCACCGCCGCAGGTGACGCCGCAGGCGTTCG GGGACGTGCACAAGAGTAGCAGCAGGGTCGTCGGCTCCGGCGCG]




>consensus_5347#0
GCGGTGTTTGTGTTGATGATGGCCGTGCAGGCGCAGTACGTCGCCCACGCCTCCCGCTCC
TCCTCCTCCGCGGCGTACGCCATCAGGCCGGCTCTGGAGAACGCGGCGCCGAGCAGCGGC
GCATCGGCGTTGTTCCTGGACGAGGCCGTCTCAGCGGCGCTGCTACAGCAGCAGCTTGTT
GTTGCTGCTGCGGCGGTGGGCGGCGGCGGCAACAACAACAACACGGCGGTGTTCAGTGAC
CTGCGAAGCGAGCTTACTTGTAGCCAGCGCCGCTTTGACGACTTCGGCGGCGGCTTCGTG
CCGCGGAAGCGCGCGCGGGTTGGCGGCGAGGGAGAGGCGGCGGCGGGTCTGTTGATGAGC
AGCAGCGTCATGGAGNGCGGCGGGCACCCGCGCTGTTGCCGCCGCCACCGCCGCAGTGAC
GCCGCAGTTNCGCGGGACGTGCACAAGAGTAGCAGCAGGGTCGTCGGCTCCGGCGCG

clustalw multiple alignements is not computed in this case