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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5359 cluster # 5359       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5359#0 length = 432 sequences # 3  

consensusID : consensus_5359#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 432
fasta sequence
                              [AGTTTTTTTTTTTTTTTTTTTTCTAGATAAAAAGCAGCCATTTATTAGTAGTAGGGCAATTTCCAGAGTACACATAAAACAAGCATTGACTCAGCAATTAGGTATCAATAATTTTGCCACCACCTGATATTAAGGATCACACAGATATTTCTGATTATTTC-GCCACCACCTGATACAACTGGAAGGATGGAAATGCAGAAAAGAAAAGGGTGGACTCCTGCTGG-AGTTTCA-CCATTGCCGTTTTGTG-ACTTGCCGGTTTGGTGCGTACCT-CAG-CGA-CACCTAGGAGGCCGGAAAGGCACCATGGAGTTGAAGAGCTTCTTGAACTGGAGCTTAGCCAT-TGCTCTTCAT-CCTCCTCCTCCTGCTGCTCTCAAGAACCATGTGCATGTTCAAGCCCATTTCATCTTCCATGGTTAGTAGTGAGTACAAACAAGA]

[+] EMBL CA755970             [AGTTTTTTTTTTTTTTTTTTTTCTAGATAAAAAGCAGCCATTTATTAGTAGTAGGGCAATTTCCAGAGTACACATAAAACAAGCATTGACTCAGCAATTAGGTATCAATAATTTTGCCACCACCTGATATTAAGGATCACACAGATATTTCTGATTATTTC GCCACCACCTGATACAACTGGAAGGATGGAAATGCAGAAAAGAAAAGGGTGGACTCCTGCTGG AGTTTCA CCATTGCCGTTTTGTG ACTTGCCGGTTTGGTGCGTACCT CAGCCGACCACCTAGGAGGCCGGAAAGGCACCATGGAGTTGAAGAGCTTCTTGAACTGGAGCTTAGCCAT TGCTCTTCAT CCTCCTCCTCCTGCTGCTCTCAAGAACCATGTG                                                   ]
[-] EMBL BI809851             [              TTTTTTTTTTAGATAAAAAGCAGCCATTTATTAGTAGTAGGGCAATTTCCAGAGTACACATAAAACAAGCATTGACTCAGCAATTAGGTATCAATAATTTTGCCACCACCTGATATTAAGGATCACACAGATATTTCTGATTATTTCTGCCACCACCTGATACAACTGGAAGGATGGAAATGCAGAAAAGAAAAGGGTGGACTCCTGCTGG AGTTTCA CCATTGCCGTTTTGTG ACTTGCCGGTTTGGTGCGTACCT CAG CGA CA CTAG                                                                                                                                                       ]
[-] EMBL BI809872             [                                                                                                                                                                                                                       tcCCTGCTGGCAGTTTCACCCATTGCCGTTTTGTGCACTTGCCGGTTTGGTGCGTACCTCCAG CGA CACCTAAGAGGCCGGAAAGGCACCATGGAGTTGAAGAGCTTCTTGAACTGGAGCTTAGCCATGTGCTCTTCATACCTCCTCCTCCTGCTGCTCTCAAGAACCATGTGCATGTTCAAGCCCATTTCATCTTCCATGGTTAGTAGTGAGTACAAACAAGA]


>consensus_5359#0 AGTTTTTTTTTTTTTTTTTTTTCTAGATAAAAAGCAGCCATTTATTAGTAGTAGGGCAAT TTCCAGAGTACACATAAAACAAGCATTGACTCAGCAATTAGGTATCAATAATTTTGCCAC CACCTGATATTAAGGATCACACAGATATTTCTGATTATTTCGCCACCACCTGATACAACT GGAAGGATGGAAATGCAGAAAAGAAAAGGGTGGACTCCTGCTGGAGTTTCACCATTGCCG TTTTGTGACTTGCCGGTTTGGTGCGTACCTCAGCGACACCTAGGAGGCCGGAAAGGCACC ATGGAGTTGAAGAGCTTCTTGAACTGGAGCTTAGCCATTGCTCTTCATCCTCCTCCTCCT GCTGCTCTCAAGAACCATGTGCATGTTCAAGCCCATTTCATCTTCCATGGTTAGTAGTGA GTACAAACAAGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)