cluster # 539

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Oryza sativa
cluster # 539 cluster # 539 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_539#0 length = 892 sequences # 2

consensusID : consensus_539#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 892
fasta sequence

                              [GCTCCTTCAAGGGCTGGTAAAAGCAGCAAGAGCAAACTGTCGATTGCCAAGTTCAAATCTGCCAAATCTCTTCAAGGATGGGAAGTGAATCAGGGATCATACTTTCAGGATATTTATCCTTCTAGATTCGATGAAGGCACCGATGCATCGTTTGAAATATCTGAAAATGGACAGGCTGTTTTCTCAGGTATCACCTGATATGAAAGCTATTACATCATGATCTCTGAATTGTACACTATAGTGAGATTGCCTTTTTTAAAAAAGTATTCAGATATATTGCTTCAGTTGATGATTTTTCATTTGTTTTTAATTCTCTTATCAAAATTTTCTGTGATTAGGGTTTGTTTTCACAAGAGGTGGATATGTTGAAGTGTCGAAACGGCTTTCGCTCCCACTAGGTTCCACCCTAGACAGATACGACGGCTTACTTCTATCCGTGGGTGGAAATGGAAGATCATATGTTATCATCCTTGAGACTGGTCCACTAGCTGACACCTCACAGAGCAAGAAATATTTTGCTCGGATGAACACTAAAGTAGGGTTTTGCAGGGTGAGAGTGCCGTTCTCAGATTTCAGGCCAGTGAACCCACAGGACCCTCCTCTTGACCCTTTTCTTGTGCACACATTAACCATAAGGTTTGAACCCAAAAAACAGAGACCTGGTGACTCGTCTCAAGGAGCTAGTGACCCAAGAAATTTCCAGCTTATAATGGAATTTATAAAAGCTCTACCTACTGGTCAAGAAACAGACATTGTTTTGGTTTCATGCACAGGCTCT-GGAATCGAACCTAACAGAGGAGACAAGTCCTCAAAGCAAAGAAGGCTGGAGGAGGATGCACTNAGGNGATCCGGCCTCGGATATACAATTGTATGCCCAGGTCCTCTGCAGGAA]

[+] EMBL CB621046             [GCTCCTTCAAGGGCTGGTAAAAGCAGCAAGAGCAAACTGTCGATTGCCAAGTTCAAATCTGCCAAATCTCTTCAAGGATGGGAAGTGAATCAGGGATCATACTTTCAGGATATTTATCCTTCTAGATTCGATGAAGGCACCGATGCATCGTTTGAAATATCTGAAAATGGACAGGCTGTTTTCTCAGGTATCACCTGATATGAAAGCTATTACATCATGATCTCTGAATTGTACACTATAGTGAGATTGCCTTTTTTAAAAAAGTATTCAGATATATTGCTTCAGTTGATGATTTTTCATTTGTTTTTAATTCTCTTATCAAAATTTTCTGTGATTAGGGTTTGTTTTCACAAGAGGTGGATATGTTGAAGTGTCGAAACGGCTTTCGCTCCCACTAGGTTCCACCCTAGACAGATACGACGGCTTACTTCTATCCGTGGGTGGAAATGGAAGATCATATGTTATCATCCTTGAGACTGGTCCACTAGCTGACACCTCACAGAGCAAGAAATATTTTGCTCGGATGAACACTAAAGTAGGGTTTTGCAGGGTGAGAGTGCCGTTCTCAGATTTCAGGCCAGTGAACCCACAGGACCCTCCTCTTGACCCTTTTCTTGTGCACACATTAACCATAAGGTTTGAACCCAAAAAACAGAGACCTGGTGACTCGTCTCAAGGAGCTAGTGACCCAAGAAATTTCCAGCTTATAATGGAATTTATAAAAGCTCTACCTACTGGTCAAGAAACAGACATTGTTTTGGTTTCATGCACAGGCTCT GGAATCG                                                                                                           ]
[+] EMBL OSS14175A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATCATATGTTATCATCCTTGAGACTGGTCCACTAGCTGACACCTCACAGAGCAAGAAATATTTTGCTCGGATGAACACTAAAGTAGGGTTTTGCAGGGTGAGAGTGCCGTTCTCAGATTTCAGGCCAGTGAACCCACAGGACCCTCCTCTTGACCCTTTTCTTGTGCACACATTAACCATAAGGTTTGAACCCAAAAAACAGAGACCTGGTGACTCGTCTCAAGGAGCTAGTGACCCAAGAAATTTCCAGCTTATAATGGAATTTATAAAAGCTCTACCTACTGGTCAAGAAACAGACATTGTTTTGGTTTCATGCACAGGCTCTGGGAATCGAACCTAACAGAGGAGACAAGTCCTCAAAGCAAAGAAGGCTGGAGGAGGATGCACTNAGGNGATCCGGCCTCGGATATACAATTGTATGCCCAGGTCCTCTGCAGGAA]




>consensus_539#0
GCTCCTTCAAGGGCTGGTAAAAGCAGCAAGAGCAAACTGTCGATTGCCAAGTTCAAATCT
GCCAAATCTCTTCAAGGATGGGAAGTGAATCAGGGATCATACTTTCAGGATATTTATCCT
TCTAGATTCGATGAAGGCACCGATGCATCGTTTGAAATATCTGAAAATGGACAGGCTGTT
TTCTCAGGTATCACCTGATATGAAAGCTATTACATCATGATCTCTGAATTGTACACTATA
GTGAGATTGCCTTTTTTAAAAAAGTATTCAGATATATTGCTTCAGTTGATGATTTTTCAT
TTGTTTTTAATTCTCTTATCAAAATTTTCTGTGATTAGGGTTTGTTTTCACAAGAGGTGG
ATATGTTGAAGTGTCGAAACGGCTTTCGCTCCCACTAGGTTCCACCCTAGACAGATACGA
CGGCTTACTTCTATCCGTGGGTGGAAATGGAAGATCATATGTTATCATCCTTGAGACTGG
TCCACTAGCTGACACCTCACAGAGCAAGAAATATTTTGCTCGGATGAACACTAAAGTAGG
GTTTTGCAGGGTGAGAGTGCCGTTCTCAGATTTCAGGCCAGTGAACCCACAGGACCCTCC
TCTTGACCCTTTTCTTGTGCACACATTAACCATAAGGTTTGAACCCAAAAAACAGAGACC
TGGTGACTCGTCTCAAGGAGCTAGTGACCCAAGAAATTTCCAGCTTATAATGGAATTTAT
AAAAGCTCTACCTACTGGTCAAGAAACAGACATTGTTTTGGTTTCATGCACAGGCTCTGG
AATCGAACCTAACAGAGGAGACAAGTCCTCAAAGCAAAGAAGGCTGGAGGAGGATGCACT
NAGGNGATCCGGCCTCGGATATACAATTGTATGCCCAGGTCCTCTGCAGGAA

clustalw multiple alignements is not computed in this case