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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5395 cluster # 5395       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5395#0 length = 878 sequences # 3  

consensusID : consensus_5395#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 878
fasta sequence
                              [TACAAGTCCAGCTTATTAAACAGAATAATTTGGTTCATCACCAAACCCTTAAGAATGAGATTTCAAGCCCAATTTCTGTTTTGGAACGAAAGAGTGGAGAGCTCCATAAGGTACCGCTTCATGCTGCTACAGCTGTGCTACCAGTCACCGCTATGGAGAAGGCAACAAAATGGGAGCCAGAGAGCTTGGAGGGAATGGAAGCACATGATGCCTATCTGATAGCTAGTCAACTAAATCTTCTCAACGAGCAGCAAGATGCAACTTATGTTGCTAACCTCCAGATGGAGCTCCAGCAAGCACGTGATCGGGTAAGTGAACTGGAAACCGAGCGACGTGCGGCTAAGAAGAAGCTGGATCACTTGTTCAAGAAACTTGCAGAGGAAAAGGCAGCTTGGCGGAGTAGAGAGCATGAGAAAGTGCGCGCAATTCTTGAAGATATGAAGGCAGATCTTGACCATGAGAAGAAAAACAGGAGACGCCTGGAGATGATTAACTTGAAGCTTGTCAATGAGTTGAAGGAAGCCAAGATGTCAGCAAAGCAGCTACTGCAAGAATATGATAATGAGAGGAAAGCACGCGAGCTCACTGAGGAGGTGTGCAATGAACTGGCAAGGGAGGTGGAGGAAGACAAAGCCGAGATTGAAGCCTTGAAACATGATTCCCTCAAGCTGCGAGAGGAGGTTGATGAGGAGCGCAAGATGCTACAGATGGCTGAGGTTTGGCGTGAAGAACGGGTGCAGATGAAGCTTGTTGATGCAAAACTTACTCTTGATGCCAAATACACACAATTGAGCAAACTGCAACAGGATGTTGAGGCTTTTATTGCTGCATGCAGTTGTGCTAGAGGAGACATTATGGTTGTGGAAGAAGCAGAGAAC]

[+] EMBL CB000520             [TACAAGTCCAGCTTATTAAACAGAATAATTTGGTTCATCACCAAACCCTTAAGAATGAGATTTCAAGCCCAATTTCTGTTTTGGAACGAAAGAGTGGAGAGCTCCATAAGGTACCGCTTCATGCTGCTACAGCTGTGCTACCAGTCACCGCTATGGAGAAGGCAACAAAATGGGAGCCAGAGAGCTTGGAGGGAATGGAAGCACATGATGCCTATCTGATAGCTAGTCAACTAAATCTTCTCAACGAGCAGCAAGATGCAACTTATGTTGCTAACCTCCAGATGGAGCTCCAGCAAGCACGTGATCGGGTAAGTGAACTGGAAACCGAGCGACGTGCGGCTAAGAAGAAGCTGGATCACTTGTTCAAGAAACTTGCAGAGGAAAAGGCAGCTTGGCGGAGTAGAGAGCATGAGAAAGTGCGCGCAATTCTTGAAGATATGAAGGCAGATCTTGACCATGAGAAGAAAAACAGGAGACGCCTGGAGATGATTAACTTGAAGCTTGTCAATGAGTTGAAGGAAGCCAAGATGTCAGCAAAGCAGCTACTGCAAGAATATGATAATGAGAGGAAAGCACGCGAGCTCACTGAGGAGGTGTG                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB000081             [                                                                                                                      TCATGCTGCTACAGCTGTGCTACCAGTCACCGCTATGGAGAAGGCAACAAAATGGGAGCCAGAGAGCTTGGAGGGAATGGAAGCACATGATGCCTATCTGATAGCTAGTCAACTAAATCTTCTCAACGAGCAGCAAGATGCAACTTATGTTGCTAACCTCCAGATGGAGCTCCAGCAAGCACGTGATCGGGTAAGTGAACTGGAAACCGATTTATGTGCGGCTAAGAAGAAGCTGGATCACTTGTTCAAGAAACTTGCAGAGGAAAAGGCAGCTTGGCGGAGTAGAGAGCATGAGAAAGTGCGCGCAATTCTTGAAGATATGAAGGCAGACGTTGACCATGAGAAGAAAAACAGGAGACGCCTGGAGATGATTAACTTGAAGCTTGACAATGAGTTGAAGGAAGCCGAGATGTCAGCAA                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AY224500             [                                                                                                                                                                                                                                                                                                                                                                                                      tTTGGGGGGGTAGAGAGCATGAGAAAGTGCGCGCAATTCTTGAAGATATTAAGGCAGATCTTGACCATGAGAAGAAAAACAGGAGACGCCCCGAGATGATTAACTTGAAACATGTCAATGAGTTGAAGGAAGCCCAGATGTCAGCAAAGCAGCTACTGCAAGAATATGATAATGAGAGGAAAGCACGCGAGCTCACTGAGGAGGTGTGCAATGAACTGGCAAGGGAGGTGGAGGAAGACAAAGCCGAGATTGAAGCCTTGAAACATGATTCCCTCAAGCTGCGAGAGGAGGTTGATGAGGAGCGCAAGATGCTACAGATGGCTGAGGTTTGGCGTGAAGAACGGGTGCAGATGAAGCTTGTTGATGCAAAACTTACTCTTGATGCCAAATACACACAATTGAGCAAACTGCAACAGGATGTTGAGGCTTTTATTGCTGCATGCAGTTGTGCTAGAGGAGACATTATGGTTGTGGAAGAAGCAGAGAAC]


>consensus_5395#0 TACAAGTCCAGCTTATTAAACAGAATAATTTGGTTCATCACCAAACCCTTAAGAATGAGA TTTCAAGCCCAATTTCTGTTTTGGAACGAAAGAGTGGAGAGCTCCATAAGGTACCGCTTC ATGCTGCTACAGCTGTGCTACCAGTCACCGCTATGGAGAAGGCAACAAAATGGGAGCCAG AGAGCTTGGAGGGAATGGAAGCACATGATGCCTATCTGATAGCTAGTCAACTAAATCTTC TCAACGAGCAGCAAGATGCAACTTATGTTGCTAACCTCCAGATGGAGCTCCAGCAAGCAC GTGATCGGGTAAGTGAACTGGAAACCGAGCGACGTGCGGCTAAGAAGAAGCTGGATCACT TGTTCAAGAAACTTGCAGAGGAAAAGGCAGCTTGGCGGAGTAGAGAGCATGAGAAAGTGC GCGCAATTCTTGAAGATATGAAGGCAGATCTTGACCATGAGAAGAAAAACAGGAGACGCC TGGAGATGATTAACTTGAAGCTTGTCAATGAGTTGAAGGAAGCCAAGATGTCAGCAAAGC AGCTACTGCAAGAATATGATAATGAGAGGAAAGCACGCGAGCTCACTGAGGAGGTGTGCA ATGAACTGGCAAGGGAGGTGGAGGAAGACAAAGCCGAGATTGAAGCCTTGAAACATGATT CCCTCAAGCTGCGAGAGGAGGTTGATGAGGAGCGCAAGATGCTACAGATGGCTGAGGTTT GGCGTGAAGAACGGGTGCAGATGAAGCTTGTTGATGCAAAACTTACTCTTGATGCCAAAT ACACACAATTGAGCAAACTGCAACAGGATGTTGAGGCTTTTATTGCTGCATGCAGTTGTG CTAGAGGAGACATTATGGTTGTGGAAGAAGCAGAGAAC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)