cluster # 54

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Oryza sativa
cluster # 54 cluster # 54 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_54#0 length = 501 sequences # 2

consensusID : consensus_54#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 501
fasta sequence

                              [TCAACAGCGCTGAATGAGGCCCTGACAACCGAAGTCCAACGCCTAAAACTCGCCACCGCTGAGCTCGGCGATTCTT--GCTCGTCCAGCAGTCTAGCTCAGCAGA-TCCAACTCAATGCTCAGAATCAGATGTTTCAACTGCAGCAGCAGCAGGCTACGCAGATACCATTCTATCAACTGCAGCAGTCACAACAGAACGGTGCAGCGAAGAACAATGAATCAAAAGAATGATTCCAGAGGCATTTTGGGCTGGTTCATGGAAAGAGAATATTGGTTTAGATGAGCGCAATTCGCATATTCCTAACTCATTTGTTTTAATGTTGTTAATAATCACCTTGCATTTTTCTAGTAGGTGGTGGTTGGTGAACCTCCTTTTACCTTTCTATGTTCATTGATTCTTTGGGTGATACAGTTGTCATTTTTAAGGTACCAAACTGATGGANGTTGTAGGTGA-TGGTAATC-TTTGGAC-AATATCTATGTCGAGTATTTTGAGTAAAAAAAAAA]

[+] EMBL OS1153A              [TCAACAGCGCTGAATGAGGCCCTGACAACCGAAGTCCAACGCCTAAAACTCGCCACCGCTGAGCTCGGCGATTCTT  GCTCGTCCAGCAGTCTAGCTCAGCAGA TCCAACTCAATGCTCAGAATCAGATGTTTCAACTGCAGCAGCAGCAGGCTACGCAGATACCATTCTATCAACTGCAGCAGTCACAACAGAACGGTGCAGCGAAGAACAATGAATCAAAAGAATGATTCCAGAGGCATTTTGGGCTGGTTCATGGAAAGAGAATATTGGTTTAGATGAGCGCAATTCGCATATTCCTAACTCATTTGTTTTAATGTTGTTAATAATCACCTTGCATTTTTCTAGTAGGTGGTGGTTGGTGAACCTCCTTTTACCTTTCTATGTTCATTGATTCTTTGGGTGATACAGTTGTCATTTTTAAGGTACCAAACTGATGGANGTTGTAGGTGA TGGTAATC TTTGGAC AATAT                              ]
[+] EMBL C98212               [                                                             AGCTCGGCGATTCTTTGGCTCGTCCNGCAGTCTAGCTCAGCAGATTCCAACTCAATGCTCAGAATCAGATGTTTCAACTGCAGCAGCAGCA GNTACGCAGATACCATTCTATCAACTGCAGCAGTCACAACAGANCGGTGCAGCGAAGNACAATGAATCAAAAGAATGATTCCAGAGGCATTTTGGGCTGGTTCATGGAAAGAGAATATTGGTTTAGATGAGCGCAATTCGCATATTCCTAACTCATTTGTTTTAATGTTGTTAATAATCACCTTGCATTTTTCTAGTAGGTGGTGGTTGGTGAACCTCCTTTTACCTTTCTATGTTCATTGATTCTTTGGATGATACAGTTGTCATTTTTAAGTTACCAAACTGAT GAAGTTGTAGGTGATTGTTATTCTTTTGTACTAATATCTATGTCGAGTATTTTGAGTAAAAAAAAAA]




>consensus_54#0
TCAACAGCGCTGAATGAGGCCCTGACAACCGAAGTCCAACGCCTAAAACTCGCCACCGCT
GAGCTCGGCGATTCTTGCTCGTCCAGCAGTCTAGCTCAGCAGATCCAACTCAATGCTCAG
AATCAGATGTTTCAACTGCAGCAGCAGCAGGCTACGCAGATACCATTCTATCAACTGCAG
CAGTCACAACAGAACGGTGCAGCGAAGAACAATGAATCAAAAGAATGATTCCAGAGGCAT
TTTGGGCTGGTTCATGGAAAGAGAATATTGGTTTAGATGAGCGCAATTCGCATATTCCTA
ACTCATTTGTTTTAATGTTGTTAATAATCACCTTGCATTTTTCTAGTAGGTGGTGGTTGG
TGAACCTCCTTTTACCTTTCTATGTTCATTGATTCTTTGGGTGATACAGTTGTCATTTTT
AAGGTACCAAACTGATGGANGTTGTAGGTGATGGTAATCTTTGGACAATATCTATGTCGA
GTATTTTGAGTAAAAAAAAAA

clustalw multiple alignements is not computed in this case