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Oryza sativa
cluster # 5403 cluster # 5403       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5403#0 length = 1526 sequences # 3  

consensusID : consensus_5403#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1526
fasta sequence
                              [TGGCTCTTGATCAGCCTCCGGATCGTGTAGCGCAGTGGTGGCTAGCACGTAGGTAGCAACAAAGCCATGGACATGGAGCATGAGCTCAGGGGCGGCGGCGTCGGGGCGGCGGCGCATGGGCATGGCTCCATCTGCTTCTCCGGCGGGCCGGTGCTCGTCGACGGGCGACGCATCCAGCAGCTGCTCCTCCACTGCGCCGCCGCGCTCGAGTCCAACGACGTGACGCTGGCGCAGCAGGCCATGTGGGTGCTCAACAACATCGCCTCCTCGCAGGGGGACCCCAGCCAGCGGCTCACGTCGTGGCTGCTCCGCGCGCTCGTCGCCCGCGCGTGCCGTCTCTGCGCGGCGGCGCCGGCGGGCGCCGCCGTGG-AGTTTCTGGAGAGAGGCCGGGCACCGCCGTGGGGGAGGGCCATGTCGGTGACGGAGCTCGCCGACTACGTCGACCTCACCCCGTGGCACCGGTTCGGCTTCACGGCGTCCAACGCCGCCATCCTCCGCGCCGTGGCCGGCGCATCCGCCGTGCACGTCGTCGACCTCAGCGTCACGCACTGCATGCAGTGGCCGACGCTCATCGACGTGCTGTCCAAGCGGCCCGGTGGCGCGCCGGCGATCCGGATCACCGTGCCGTCCGTGCGCCCCGCCGTCCCGCCGCTTCTCGCCGTGTCGAGCTCGGAGCTCGGAGCCCGGCTCGCCATCTTCGCCAAGTCCAAAGGCGTGCAGCTGGAGTTCAACGTCGTCGAGAGCGCGACGACGACGTCTCCGAAGAAGACGTCGACGACGCTGTGCCAAGAACTCGCGTCCGTGCTGTCCGACCCGCCGTCGCTGGGGCTAAGGGACGGCGAGGCGGTCGTCGTGAACTGCCAGAGCTGGCTCCGGCACGTCGCGCCGGACACGAGGGACCTCTTCCTCGACACGGTCCGGGCGCTGAACCCCTGCCTGCTCACCGTCACCGACGAGGACGCCGACCTGGGCTCCCCGAGCCTCGCGTCGCGCATGGCGGGCTGCTTCGACTTCCACTGGATCCTGCTCGACGCGCTCGACATGTCGGCGCCCAAGGACAGCCCGCGGCGGCTGGAGCAGGAGGCGGCCGTCGGGCGGAAGATCGAGAGCGTCATCGGCGAGGAAGACGGCGCCGAGCGCTCGGAGCCCGGCGCGAGGCTCGCCGAGAGGATGAGCCGGAAAGGGTTCGCCGGCGTCGTGTTCGACGAGGAGGCGGCGGCGGAGGTGCGACGATTGCTGAGCGAGCACGCCACGGGGTGGGGCGTGAAGCGGGAAGACGACATGCTGGTGCTGACGTGGAAGGGGCACGCCGCCGTGTTCACCGGCGCTTGGACGCCCAACTAGTTGAGCCTAGCTTAGCAATCTACAGTATACATCAAGTGATTAAAGCTTAAGCTGGTGTTAGACTGTCTATTAGCTCAGAAGTGACAACGGAGAATCAACTGAGGAGGAATTTCTGGTTGGATTTAGTGGATCGTTTTAAACTTCTACTTCCATGACAAGATATTTCAGTTGAATTCTTGATG]

[+] EMBL AK070489             [TGGCTCTTGATCAGCCTCCGGATCGTGTAGCGCAGTGGTGGCTAGCACGTAGGTAGCAACAAAGCCATGGACATGGAGCATGAGCTCAGGGGCGGCGGCGTCGGGGCGGCGGCGCATGGGCATGGCTCCATCTGCTTCTCCGGCGGGCCGGTGCTCGTCGACGGGCGACGCATCCAGCAGCTGCTCCTCCACTGCGCCGCCGCGCTCGAGTCCAACGACGTGACGCTGGCGCAGCAGGCCATGTGGGTGCTCAACAACATCGCCTCCTCGCAGGGGGACCCCAGCCAGCGGCTCACGTCGTGGCTGCTCCGCGCGCTCGTCGCCCGCGCGTGCCGTCTCTGCGCGGCGGCGCCGGCGGGCGCCGCCGTGG AGTTTCTGGAGAGAGGCCGGGCACCGCCGTGGGGGAGGGCCATGTCGGTGACGGAGCTCGCCGACTACGTCGACCTCACCCCGTGGCACCGGTTCGGCTTCACGGCGTCCAACGCCGCCATCCTCCGCGCCGTGGCCGGCGCATCCGCCGTGCACGTCGTCGACCTCAGCGTCACGCACTGCATGCAGTGGCCGACGCTCATCGACGTGCTGTCCAAGCGGCCCGGTGGCGCGCCGGCGATCCGGATCACCGTGCCGTCCGTGCGCCCCGCCGTCCCGCCGCTTCTCGCCGTGTCGAGCTCGGAGCTCGGAGCCCGGCTCGCCATCTTCGCCAAGTCCAAAGGCGTGCAGCTGGAGTTCAACGTCGTCGAGAGCGCGACGACGACGTCTCCGAAGAAGACGTCGACGACGCTGTGCCAAGAACTCGCGTCCGTGCTGTCCGACCCGCCGTCGCTGGGGCTAAGGGACGGCGAGGCGGTCGTCGTGAACTGCCAGAGCTGGCTCCGGCACGTCGCGCCGGACACGAGGGACCTCTTCCTCGACACGGTCCGGGCGCTGAACCCCTGCCTGCTCACCGTCACCGACGAGGACGCCGACCTGGGCTCCCCGAGCCTCGCGTCGCGCATGGCGGGCTGCTTCGACTTCCACTGGATCCTGCTCGACGCGCTCGACATGTCGGCGCCCAAGGACAGCCCGCGGCGGCTGGAGCAGGAGGCGGCCGTCGGGCGGAAGATCGAGAGCGTCATCGGCGAGGAAGACGGCGCCGAGCGCTCGGAGCCCGGCGCGAGGCTCGCCGAGAGGATGAGCCGGAAAGGGTTCGCCGGCGTCGTGTTCGACGAGGAGGCGGCGGCGGAGGTGCGACGATTGCTGAGCGAGCACGCCACGGGGTGGGGCGTGAAGCGGGAAGACGACATGCTGGTGCTGACGTGGAAGGGGCACGCCGCCGTGTTCACCGGCGCTTGGACGCCCAACTAGTTGAGCCTAGCTTAGCAATCTACAGTATACATCAAGTGATTAAAGCTTAAGCTGGTGTTAGACTGTCTATTAGCTCAGAAGTGACAACGGAGAATCAACTGAGGAGGAATTTCTGGTTGGATTTAGTGGATCGTTTTAAACTTCTACTTCCATGACAAGATATTTCAGTTGAATTCTTGATG]
[+] EMBL AU056557             [                                                                                                                                                                                                                                                                      CCTCNTCGCAGGGGGACCCCAGCCAGCGGCTCACGTCGTGGCTGCTCCGCGCGCTCGTCGCCCGCGCGTNCCGTCTCTGCGCGGCGGCGCCGGCGGGCG CGCNTNGGNAGTTTCTGGAGAGAGGCCGGGCACCGCCGTGGGGGAGGGCCATGTCGGTGACGGAGCTCGCCGACTACNTCGACCTCACCCCGTGGCACCGGTTCGGCTTCACGGCGTCCAACGNCGCCATCCTCCGCGCCGTGGCCGGCGCATCCGCCGTNCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB683285             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GTTCCATGAGGAGGCGGCGGCGGAGGTGCGACGATTGCTGAGCGAGCACGCCACGGGGTGGGGCGTGAAGCGGGAAGACGACATGCTGGTGCTGACGTGGAAGGGGCACGCCGCCGTGTTCACCGGCGCTTGGACGCCCAACTAGTTGAGCCTAGCTTAGCAATCTACAGTATACATCAAGTGATTAAAGCTTAAGCTGGTGTTAGACTGTCTATTAGCTCAGAAGTGACAACGGAGAATCAACTGAGGAGGAATTTCTGGTTGGATTTAGTGGATCGTTTTAAACTTCTACTTCCATGACAAGATATTTCAGT             ]


>consensus_5403#0 TGGCTCTTGATCAGCCTCCGGATCGTGTAGCGCAGTGGTGGCTAGCACGTAGGTAGCAAC AAAGCCATGGACATGGAGCATGAGCTCAGGGGCGGCGGCGTCGGGGCGGCGGCGCATGGG CATGGCTCCATCTGCTTCTCCGGCGGGCCGGTGCTCGTCGACGGGCGACGCATCCAGCAG CTGCTCCTCCACTGCGCCGCCGCGCTCGAGTCCAACGACGTGACGCTGGCGCAGCAGGCC ATGTGGGTGCTCAACAACATCGCCTCCTCGCAGGGGGACCCCAGCCAGCGGCTCACGTCG TGGCTGCTCCGCGCGCTCGTCGCCCGCGCGTGCCGTCTCTGCGCGGCGGCGCCGGCGGGC GCCGCCGTGGAGTTTCTGGAGAGAGGCCGGGCACCGCCGTGGGGGAGGGCCATGTCGGTG ACGGAGCTCGCCGACTACGTCGACCTCACCCCGTGGCACCGGTTCGGCTTCACGGCGTCC AACGCCGCCATCCTCCGCGCCGTGGCCGGCGCATCCGCCGTGCACGTCGTCGACCTCAGC GTCACGCACTGCATGCAGTGGCCGACGCTCATCGACGTGCTGTCCAAGCGGCCCGGTGGC GCGCCGGCGATCCGGATCACCGTGCCGTCCGTGCGCCCCGCCGTCCCGCCGCTTCTCGCC GTGTCGAGCTCGGAGCTCGGAGCCCGGCTCGCCATCTTCGCCAAGTCCAAAGGCGTGCAG CTGGAGTTCAACGTCGTCGAGAGCGCGACGACGACGTCTCCGAAGAAGACGTCGACGACG CTGTGCCAAGAACTCGCGTCCGTGCTGTCCGACCCGCCGTCGCTGGGGCTAAGGGACGGC GAGGCGGTCGTCGTGAACTGCCAGAGCTGGCTCCGGCACGTCGCGCCGGACACGAGGGAC CTCTTCCTCGACACGGTCCGGGCGCTGAACCCCTGCCTGCTCACCGTCACCGACGAGGAC GCCGACCTGGGCTCCCCGAGCCTCGCGTCGCGCATGGCGGGCTGCTTCGACTTCCACTGG ATCCTGCTCGACGCGCTCGACATGTCGGCGCCCAAGGACAGCCCGCGGCGGCTGGAGCAG GAGGCGGCCGTCGGGCGGAAGATCGAGAGCGTCATCGGCGAGGAAGACGGCGCCGAGCGC TCGGAGCCCGGCGCGAGGCTCGCCGAGAGGATGAGCCGGAAAGGGTTCGCCGGCGTCGTG TTCGACGAGGAGGCGGCGGCGGAGGTGCGACGATTGCTGAGCGAGCACGCCACGGGGTGG GGCGTGAAGCGGGAAGACGACATGCTGGTGCTGACGTGGAAGGGGCACGCCGCCGTGTTC ACCGGCGCTTGGACGCCCAACTAGTTGAGCCTAGCTTAGCAATCTACAGTATACATCAAG TGATTAAAGCTTAAGCTGGTGTTAGACTGTCTATTAGCTCAGAAGTGACAACGGAGAATC AACTGAGGAGGAATTTCTGGTTGGATTTAGTGGATCGTTTTAAACTTCTACTTCCATGAC AAGATATTTCAGTTGAATTCTTGATG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)