cluster # 5410

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Oryza sativa
cluster # 5410 cluster # 5410 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5410#0 length = 1205 sequences # 3
consensusID : consensus_5410#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1205
fasta sequence
                              [TCCCTCTCTCCTCATCCTCCTCCGTGTTCCTGATCTGCGCACGCACGGCCGCCCTCCTCCTCCTCCCCCCGCGCTTCGCTTCCTCGCGCGCGCGCGTCATCGAAGCTGGCCTAGAGACTCCTCGGCGAGAGGACGGTTCTCCCCCCTCTCCCGCCCCCCGCGCGCGCGCGGCAGGTTTGGGAGATCGACGGTGGTCGGTGGCCTCCTCCCTCCTGTCCTGCCCGGTTCGAGTCGAATTGAAAGGCACAGCTGGTTCTGTCATTTGGCTGTTCAGAAGCCTGGAGGCTGGGCCATTTGATATCCTGAAGTTTTGAGTAAGAATGGAGAATGGGCTGTCCGATGAAGTTCTTAAAGC-AGTTTTCCCTCTACTGGATGGTCAAGACCTAGTCTTTTGCATGCTTGTATGTCGTCAATGGCGAGAAATTGCAAAGGATGACTACTTCTGGAAATGCATATGTGCGAGGAAGTGGCCTTCCATTTGCAAGCAACCTCCTTCAGATGCAAACTACCAGAAGCTCTATTTAACCTTCTCCAAACCACGGACGCCACAGCACCTTCCTGTACCAAAGCTCACATTCGAGGATCTTGTGTTTTACATTGACATGTGGCTTGACGGATCACTCATCTTCTCTCAAGCTGTTTCAGGCTGCATCCTTCGAGGAGGTCTGCAGAATACACCTTGTGGCATTCCGGATGTACTTGTAGCACATTTGACTGCTCCTGACTGCATTCTGATGATGGAGGTTGAACCCAAGCTGGAAATAACTATGGGGCCATCCATCACTGTGTCTGTTCTTGCCCACCGAAAGGATACAAAGAAGATGGCTTGCGTCATTAATAAGTCAACTTTTGATTACATCGACAGCAACGCAGCACGGGCATTGGCATATGAATATCTCCAGTTTTCACCAAGATACCCTTTTATATCAGACATCCGAGCATGGATGTCTTTGCTTTTCCTGTACAAAGGAACAAACGTCATCGAAGTATTTGGTATAGAGCTAGACTTTTGTGATGCAGCAAGGTCGGAGACTGAAATTCTTTGGCTCTTAGACATGCTTGATTGGAAATAGAAGCTTTAATCGTTTTTTCTGTTGTGATTTGACGCATGTAAAGAATGTTCATGGTTAATTCTTGTTATCCAGTTGAAGCATGTGTACTACTGAACCATATGTACTGTTGGAAATTTGGAATAAAAATGGTTC]

[+] EMBL AK069736             [TCCCTCTCTCCTCATCCTCCTCCGTGTTCCTGATCTGCGCACGCACGGCCGCCCTCCTCCTCCTCCCCCCGCGCTTCGCTTCCTCGCGCGCGCGCGTCATCGAAGCTGGCCTAGAGACTCCTCGGCGAGAGGACGGTTCTCCCCCCTCTCCCGCCCCCCGCGCGCGCGCGGCAGGTTTGGGAGATCGACGGTGGTCGGTGGCCTCCTCCCTCCTGTCCTGCCCGGTTCGAGTCGAATTGAAAGGCACAGCTGGTTCTGTCATTTGGCTGTTCAGAAGCCTGGAGGCTGGGCCATTTGATATCCTGAAGTTTTGAGTAAGAATGGAGAATGGGCTGTCCGATGAAGTTCTTAAAGC AGTTTTCCCTCTACTGGATGGTCAAGACCTAGTCTTTTGCATGCTTGTATGTCGTCAATGGCGAGAAATTGCAAAGGATGACTACTTCTGGAAATGCATATGTGCGAGGAAGTGGCCTTCCATTTGCAAGCAACCTCCTTCAGATGCAAACTACCAGAAGCTCTATTTAACCTTCTCCAAACCACGGACGCCACAGCACCTTCCTGTACCAAAGCTCACATTCGAGGATCTTGTGTTTTACATTGACATGTGGCTTGACGGATCACTCATCTTCTCTCAAGCTGTTTCAGGCTGCATCCTTCGAGGAGGTCTGCAGAATACACCTTGTGGCATTCCGGATGTACTTGTAGCACATTTGACTGCTCCTGACTGCATTCTGATGATGGAGGTTGAACCCAAGCTGGAAATAACTATGGGGCCATCCATCACTGTGTCTGTTCTTGCCCACCGAAAGGATACAAAGAAGATGGCTTGCGTCATTAATAAGTCAACTTTTGATTACATCGACAGCAACGCAGCACGGGCATTGGCATATGAATATCTCCAGTTTTCACCAAGATACCCTTTTATATCAGACATCCGAGCATGGATGTCTTTGCTTTTCCTGTACAAAGGAACAAACGTCATCGAAGTATTTGGTATAGAGCTAGACTTTTGTGATGCAGCAAGGTCGGAGACTGAAATTCTTTGGCTCTTAGACATGCTTGATTGGAAATAGAAGCTTTAATCGTTTTTTCTGTTGTGATTTGACGCATGTAAAGAATGTTCATGGTTAATTCTTGTTATCCAGTTGAAGCATGTGTACTACTGAACCATATGTACTGTTGGAAATTTGGAATAAAAATGGTTC]
[+] EMBL CK085340             [ CCCTCTCTCCTCATCCTCCTCCGTGTTCCTGATCTGCGCACGCACGGCCGCCCTCCTCCTCCTCCCCCCGCGCTTCGCTTCCTCGCGCGCGCGCGTCATCGAAGCTGGCCTAGAGACTCCTCGGCGAGAGGACGGTTCTCCCCCCTCTCCCGCCCCCCGCGCGCGCGCGGCAGGTTTGGGAGATCGACGGTGGTCGGTGGCCTCCTCCCTCCTGTCCTGCCCGGTTCGAGTCGAATTGAAAGGCACAGCTGGTTCTGTCATTTGGCTGTTCAGAAGCCTGGAGGCTGGGCCATTTGATATCCTGAAGTTTTGAGTAAGAATGGAGAATGGGCTGTCCGATGAAGTTCTTAAAGC AGTTTTCCCTCTACTGGATGGTCAAGACCTAGTCTTTTGCATGCTTGTATGTCGTCAATGGGGAGAAATTGCAAAGGATGACTACTTCTGGAAATGCATATGTGCGAGGAAGTGGCCTTCCATTTGCAAGCAACCTCCTTCAGATGCAAACTACCAGAAGCTCTATTTAACCTTCTCCAAACCACGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB664362             [                       gggaTCCTGATCTGCGCACGCACGGCCGCCCTCCTCCTCCTCCCCCCGCGCTTCGCTTCCTCGCGCGCGCGCGTCATCAAAACTGGCCTAGAGACTCCTCGGCGAGAGGACGGTTCTCCCCCCTCTCCCGCCCCCCGCACGCGCGCGGAAGGTGTGGGAGATCGACAGGGGACGGGGGCCTCCTCCCTCCTGTCCTGCCCGGCTCGAGTCGAATTGAAAGGCACAGCTGGATCTGTCATTTGGCTGATCACAAGCCTGGAGGCTGGGCCATTTGATATCCTGAAGTTTTGAGTAACAATGGAGAATGGGCTGTCCGATGAAGTTCTTAAAGCTAG TTTCCCTCTACTGGATGGTCAAGACCTATTCTTTTGCATGCTTGTATGTCGTCAATGGCGAGAAATTGCAAAGGATGACTACTTCTGGAAATGCATATGTGCGAGGAAGTGGCCTTCCATTTGCAAGCAACCTCCTTCAGATGCCTACTACCAGAAGCTCTATTTAACCTTCTCCAAACCACGGACGCCACAGCACCTTCCTGTACCAAAGCTCACATTCGAGGATCTTGTGTTTTACATTGACATGTGGCTTGACGGATCACTCATCTTCTCTCAAGCTGTTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]




>consensus_5410#0
TCCCTCTCTCCTCATCCTCCTCCGTGTTCCTGATCTGCGCACGCACGGCCGCCCTCCTCC
TCCTCCCCCCGCGCTTCGCTTCCTCGCGCGCGCGCGTCATCGAAGCTGGCCTAGAGACTC
CTCGGCGAGAGGACGGTTCTCCCCCCTCTCCCGCCCCCCGCGCGCGCGCGGCAGGTTTGG
GAGATCGACGGTGGTCGGTGGCCTCCTCCCTCCTGTCCTGCCCGGTTCGAGTCGAATTGA
AAGGCACAGCTGGTTCTGTCATTTGGCTGTTCAGAAGCCTGGAGGCTGGGCCATTTGATA
TCCTGAAGTTTTGAGTAAGAATGGAGAATGGGCTGTCCGATGAAGTTCTTAAAGCAGTTT
TCCCTCTACTGGATGGTCAAGACCTAGTCTTTTGCATGCTTGTATGTCGTCAATGGCGAG
AAATTGCAAAGGATGACTACTTCTGGAAATGCATATGTGCGAGGAAGTGGCCTTCCATTT
GCAAGCAACCTCCTTCAGATGCAAACTACCAGAAGCTCTATTTAACCTTCTCCAAACCAC
GGACGCCACAGCACCTTCCTGTACCAAAGCTCACATTCGAGGATCTTGTGTTTTACATTG
ACATGTGGCTTGACGGATCACTCATCTTCTCTCAAGCTGTTTCAGGCTGCATCCTTCGAG
GAGGTCTGCAGAATACACCTTGTGGCATTCCGGATGTACTTGTAGCACATTTGACTGCTC
CTGACTGCATTCTGATGATGGAGGTTGAACCCAAGCTGGAAATAACTATGGGGCCATCCA
TCACTGTGTCTGTTCTTGCCCACCGAAAGGATACAAAGAAGATGGCTTGCGTCATTAATA
AGTCAACTTTTGATTACATCGACAGCAACGCAGCACGGGCATTGGCATATGAATATCTCC
AGTTTTCACCAAGATACCCTTTTATATCAGACATCCGAGCATGGATGTCTTTGCTTTTCC
TGTACAAAGGAACAAACGTCATCGAAGTATTTGGTATAGAGCTAGACTTTTGTGATGCAG
CAAGGTCGGAGACTGAAATTCTTTGGCTCTTAGACATGCTTGATTGGAAATAGAAGCTTT
AATCGTTTTTTCTGTTGTGATTTGACGCATGTAAAGAATGTTCATGGTTAATTCTTGTTA
TCCAGTTGAAGCATGTGTACTACTGAACCATATGTACTGTTGGAAATTTGGAATAAAAAT
GGTTC
clustalw multiple alignements is not computed in this case