cluster # 5433

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Oryza sativa
cluster # 5433 cluster # 5433 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5433#0 length = 1713 sequences # 3
consensusID : consensus_5433#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1713
fasta sequence
                              [AGCCTGAGCAAGTCCTCGTAGCAAAGCCATGGACTGCCACCGAAACGAATCCCAGAGAGAACTGGAAATGGGCACAAAGCCTCACTTCGTGGTCATCCCATGGCTGGCCACCAGCCACATGGTACCCATCGTCGACATCGCCTGCCTCCTCGCCGCGCACGGCGCCGCGGTCACCGTCATCACGACGCCGGCCAACGCGCAGCTCGTCCAGAGCCGCGTAGACCGTGCCGGCGACCAGGGCGCTTCCAGGATCACGGTCACCACGATCCCTTTCCCGGCCGCCGAGGCCGGGCTA-CCGGAGGGGTGCGAGAGGGTGGACCACGTCCCCTCGCCGGACATGGTGCCGAGCTTCTTCGACGCCGCCATGCAGTTCGGCGACGCAGTGGCGCAGCACTGCCGGCGCCTCACGGGGCCGCGCCGGCTGAGCTGCCTCATCGCCGGGATATCTCACACGTGGGCGCACGTCCTGGCGCGCGAGCTCGGCGCTCCGTGCTTCATCTTCCACGGTTTCTGCGCGTTCTCCCTGCTCTGCTGCGAGTACCTGCACGCGCACAGGCCGCACGAGGCGGTCTCCTCGCCGGACGAGCTCTTTGACGTCCCTGTCCTGCCGCCTTTCGAGTGCAGGCTCACGAGGCGGCAGCTGCCGCTGCAGTTCCTGCCGTCCTGCCCCGTGGAGTACAGGATGAGAGAATTCCGGGAGTTCGAGCTGGCCGCGGACGGCATCGTGGTGAACAGCTTCGAAGAGCTCGAGCGTGACTCCGCCGCTCGCCTCGCCGCGGCCACAGGCAAGAAGGTGTTCGCTGTCGGCCCCGTCTCGCTGTGCTGTTCCCCTGCTCTCGACGACCCGCGCGCCGCCTCGCACGATGACGCGAAGCGGTGCATGGCGTGGCTGGACGCCAAGAAGGCCAGGTCCGTGCTGTACGTGAGCTTCGGCAGCGCCGGGCGCATGCCACCCGCGCAGCTCATGCAGCTCGGCGTGGCGCTCGTGTCGTGCCCATGGCCCGTCCTCTGGGTCATCAAGGGCGCCGGCTCGCTCCCTGGCGACGTCAAGGAGTGGCTATGTGAGAACACCGACGCCGACGGCGTGGCGGACAGCCAGTGCCTCGCGGTGCGTGGGTGGGCGCCGCAGGTAGCCATCCTGTCGCACCGGGCCGTCGGCGGCTTCGTGACGCACTGCGGGTGGGGCTCGACGCTGGAGAGCGTCGCCGCAGGCGTGCCCATGGCGGCGTGGCCGTTCACCGCGGAGCAGTTCGTGAACGAGAAGCTGATCGTGGACGTGCTTGGGATCGGCGTGTCCATCGGCGTGACGAAGCCCACCGGCGGCATGCTAACCGCCGGTGGCGGGGGCGGCGAGGAGACGGCAGAGGTCGGAACGGAGCAGGTGAAGAGGGCCTTGAACAGTCTCATGGACGGAGGAGTCGAAGGAGAAGAGAGGGCGAAGAAAGTTCACGAGCTCAAGGCCAAGGCTCACGCTGCTTTGGAGAAGGAGGGGTCATCCTACATGAATCTGGAGAAGTTGATCTTATCTGCGGTTTGAAATTTGATCGGTTTGCGTTATCATATCATCTCATTTTCTGAATAAATTCCTGTATTTGATGATTGAACTATTGATGTACTCGGGATATTGGTTTCTTGTTGAACCGTGGTATTGTGCGTTTCCATGCGCAAAGGATTGGAAAAGGGAAGATAAATTCTATACTTATAGTGATCACA]

[+] EMBL AK070948             [AGCCTGAGCAAGTCCTCGTAGCAAAGCCATGGACTGCCACCGAAACGAATCCCAGAGAGAACTGGAAATGGGCACAAAGCCTCACTTCGTGGTCATCCCATGGCTGGCCACCAGCCACATGGTACCCATCGTCGACATCGCCTGCCTCCTCGCCGCGCACGGCGCCGCGGTCACCGTCATCACGACGCCGGCCAACGCGCAGCTCGTCCAGAGCCGCGTAGACCGTGCCGGCGACCAGGGCGCTTCCAGGATCACGGTCACCACGATCCCTTTCCCGGCCGCCGAGGCCGGGCTA CCGGAGGGGTGCGAGAGGGTGGACCACGTCCCCTCGCCGGACATGGTGCCGAGCTTCTTCGACGCCGCCATGCAGTTCGGCGACGCAGTGGCGCAGCACTGCCGGCGCCTCACGGGGCCGCGCCGGCTGAGCTGCCTCATCGCCGGGATATCTCACACGTGGGCGCACGTCCTGGCGCGCGAGCTCGGCGCTCCGTGCTTCATCTTCCACGGTTTCTGCGCGTTCTCCCTGCTCTGCTGCGAGTACCTGCACGCGCACAGGCCGCACGAGGCGGTCTCCTCGCCGGACGAGCTCTTTGACGTCCCTGTCCTGCCGCCTTTCGAGTGCAGGCTCACGAGGCGGCAGCTGCCGCTGCAGTTCCTGCCGTCCTGCCCCGTGGAGTACAGGATGAGAGAATTCCGGGAGTTCGAGCTGGCCGCGGACGGCATCGTGGTGAACAGCTTCGAAGAGCTCGAGCGTGACTCCGCCGCTCGCCTCGCCGCGGCCACAGGCAAGAAGGTGTTCGCTGTCGGCCCCGTCTCGCTGTGCTGTTCCCCTGCTCTCGACGACCCGCGCGCCGCCTCGCACGATGACGCGAAGCGGTGCATGGCGTGGCTGGACGCCAAGAAGGCCAGGTCCGTGCTGTACGTGAGCTTCGGCAGCGCCGGGCGCATGCCACCCGCGCAGCTCATGCAGCTCGGCGTGGCGCTCGTGTCGTGCCCATGGCCCGTCCTCTGGGTCATCAAGGGCGCCGGCTCGCTCCCTGGCGACGTCAAGGAGTGGCTATGTGAGAACACCGACGCCGACGGCGTGGCGGACAGCCAGTGCCTCGCGGTGCGTGGGTGGGCGCCGCAGGTAGCCATCCTGTCGCACCGGGCCGTCGGCGGCTTCGTGACGCACTGCGGGTGGGGCTCGACGCTGGAGAGCGTCGCCGCAGGCGTGCCCATGGCGGCGTGGCCGTTCACCGCGGAGCAGTTCGTGAACGAGAAGCTGATCGTGGACGTGCTTGGGATCGGCGTGTCCATCGGCGTGACGAAGCCCACCGGCGGCATGCTAACCGCCGGTGGCGGGGGCGGCGAGGAGACGGCAGAGGTCGGAACGGAGCAGGTGAAGAGGGCCTTGAACAGTCTCATGGACGGAGGAGTCGAAGGAGAAGAGAGGGCGAAGAAAGTTCACGAGCTCAAGGCCAAGGCTCACGCTGCTTTGGAGAAGGAGGGGTCATCCTACATGAATCTGGAGAAGTTGATCTTATCTGCGGTTTGAAATTTGATCGGTTTGCGTTATCATATCATCTCATTTTCTGAATAAATTCCTGTATTTGATGATTGAACTATTGATGTACTCGGGATATTGGTTTCTTGTTGAACCGTGGTATTGTGCGTTTCCATGCGCAAAGGATTGGAAAAGGGAAGATAAATTCTATACTTATAGTGATCACA]
[+] EMBL OSS1943A             [                                                                                                                                                                                                                                                                                      CCGCCGAGG CGCNTNANCCGGAGGGGTGCGAGAGGGTGGACCACGTCCCCTCGCCGGACATGGTGCCGAGCTTCTTCGACGCCGCCATGCAGTTCGGCGACGCAGTGGCGCA NACTNCNGGCGCCTCACGGGGCCGCGCCGGCTGAGCTGCCTCATCGCCGGGATATCTCACACGTGGGCGCACGTCCTGGCGCGCNA CTCGGCGCTCCGTGCTTCATCTTCCACGGTTTCTGCGCGTTCTCCCTGCTCTGCTGCNAGTACCTGCACGCGCACAGGCCGCACGAGGCGGTCTCCTCGCCGGACGAGCTCTTTGACGTCCCTGTCCTGCCGNCTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU174232             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GAAGCTGATCGTGGACGTGCTTGGGATCGGCGTGTCCATCGGCGTGACGAAGCCCACCGGCGGCATGCTAACCGCCGGTGGCGGGGGCGGCGAGGAGACGGCAGAGGTCGGAACGGAGCAGGTGAAGAGGGCCTTGAACAGTCTCATGGACGGAGGAGTCGAAGGAGAAGAGAGGGCGAAGAAAGTTCACGAGCTCAAGGCCAAGGCTCACGCTGCTTTGGAGAAGGAGGGGTCATCCTACATGAATCTGGAGAAGTTGATCTTATCTGCGGTTTGAAATTTGATCGGTTTGCGTTATCATATCATCTCATTTTCTGAATAAATTCCTGTATTTGATGATTGAACTATTGATGTACTCGGGATATTGGTTTCTTGTTGAACCGTGGTATTGTGCGTTTCCATGCGCAAAGGATTGGAAAAGGGAAGATAAATTCTATAaaaa           ]




>consensus_5433#0
AGCCTGAGCAAGTCCTCGTAGCAAAGCCATGGACTGCCACCGAAACGAATCCCAGAGAGA
ACTGGAAATGGGCACAAAGCCTCACTTCGTGGTCATCCCATGGCTGGCCACCAGCCACAT
GGTACCCATCGTCGACATCGCCTGCCTCCTCGCCGCGCACGGCGCCGCGGTCACCGTCAT
CACGACGCCGGCCAACGCGCAGCTCGTCCAGAGCCGCGTAGACCGTGCCGGCGACCAGGG
CGCTTCCAGGATCACGGTCACCACGATCCCTTTCCCGGCCGCCGAGGCCGGGCTACCGGA
GGGGTGCGAGAGGGTGGACCACGTCCCCTCGCCGGACATGGTGCCGAGCTTCTTCGACGC
CGCCATGCAGTTCGGCGACGCAGTGGCGCAGCACTGCCGGCGCCTCACGGGGCCGCGCCG
GCTGAGCTGCCTCATCGCCGGGATATCTCACACGTGGGCGCACGTCCTGGCGCGCGAGCT
CGGCGCTCCGTGCTTCATCTTCCACGGTTTCTGCGCGTTCTCCCTGCTCTGCTGCGAGTA
CCTGCACGCGCACAGGCCGCACGAGGCGGTCTCCTCGCCGGACGAGCTCTTTGACGTCCC
TGTCCTGCCGCCTTTCGAGTGCAGGCTCACGAGGCGGCAGCTGCCGCTGCAGTTCCTGCC
GTCCTGCCCCGTGGAGTACAGGATGAGAGAATTCCGGGAGTTCGAGCTGGCCGCGGACGG
CATCGTGGTGAACAGCTTCGAAGAGCTCGAGCGTGACTCCGCCGCTCGCCTCGCCGCGGC
CACAGGCAAGAAGGTGTTCGCTGTCGGCCCCGTCTCGCTGTGCTGTTCCCCTGCTCTCGA
CGACCCGCGCGCCGCCTCGCACGATGACGCGAAGCGGTGCATGGCGTGGCTGGACGCCAA
GAAGGCCAGGTCCGTGCTGTACGTGAGCTTCGGCAGCGCCGGGCGCATGCCACCCGCGCA
GCTCATGCAGCTCGGCGTGGCGCTCGTGTCGTGCCCATGGCCCGTCCTCTGGGTCATCAA
GGGCGCCGGCTCGCTCCCTGGCGACGTCAAGGAGTGGCTATGTGAGAACACCGACGCCGA
CGGCGTGGCGGACAGCCAGTGCCTCGCGGTGCGTGGGTGGGCGCCGCAGGTAGCCATCCT
GTCGCACCGGGCCGTCGGCGGCTTCGTGACGCACTGCGGGTGGGGCTCGACGCTGGAGAG
CGTCGCCGCAGGCGTGCCCATGGCGGCGTGGCCGTTCACCGCGGAGCAGTTCGTGAACGA
GAAGCTGATCGTGGACGTGCTTGGGATCGGCGTGTCCATCGGCGTGACGAAGCCCACCGG
CGGCATGCTAACCGCCGGTGGCGGGGGCGGCGAGGAGACGGCAGAGGTCGGAACGGAGCA
GGTGAAGAGGGCCTTGAACAGTCTCATGGACGGAGGAGTCGAAGGAGAAGAGAGGGCGAA
GAAAGTTCACGAGCTCAAGGCCAAGGCTCACGCTGCTTTGGAGAAGGAGGGGTCATCCTA
CATGAATCTGGAGAAGTTGATCTTATCTGCGGTTTGAAATTTGATCGGTTTGCGTTATCA
TATCATCTCATTTTCTGAATAAATTCCTGTATTTGATGATTGAACTATTGATGTACTCGG
GATATTGGTTTCTTGTTGAACCGTGGTATTGTGCGTTTCCATGCGCAAAGGATTGGAAAA
GGGAAGATAAATTCTATACTTATAGTGATCACA
clustalw multiple alignements is not computed in this case