cluster # 5443

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Oryza sativa
cluster # 5443 cluster # 5443 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5443#0 length = 459 sequences # 3

consensusID : consensus_5443#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 459
fasta sequence

                              [CGTTATTTTCTTCCTTGTTGCAATGTTACTATTCTTTGCAGTCCAAGGTGATCCTATGAAGCTACAGGCAATATGTACTCTTAGTTTGTTAGTCTTTTATAAATTGCTGCCCTCTAGAAGTGATCGCTTCCAGCCATCCTTGTTGGAAGGGATGCAGACAGTTAATAGCTTTGTAGATGGTCCAACAGATTATGAAGTTTTTTCACAACCTGACCTGGATTGGAGCCTGTATCAATCCTGAAGAAAATTTCAAGGTCAATACACACTTGTTTAGTTATTTCTTATCTCTTTCACCTGAGCTTTTCATTGTACCACTCTTGACCTTTTGTACAGTTACATAGGTAACTCTTTTGGCTTCTAGCTGAATTT-GTTTGTTGGAAATGAAAAGCACGCACTGTTTAGATCATTAAAGCTGTGTATCTAAAATTCTATGAGAAGAAAATACTTAACATTATCCTA]

[+] EMBL AK101118             [CGTTATTTTCTTCCTTGTTGCAATGTTACTATTCTTTGCAGTCCAAGGTGATCCTATGAAGCTACAGGCAATATGTACTCTTAGTTTGTTAGTCTTTTATAAATTGCTGCCCTCTAGAAGTGATCGCTTCCAGCCATCCTTGTTGGAAGGGATGCAGACAGTTAATAGCTTTGTAGATGGTCCAACAGATTATGAAGTTTTTTCACAACCTGACCTGGATTGGAGCCTGTATCAATCCTGAAGAAAATTTCAAGGTCAATACACACTTGTTTAGTTATTTCTTATCTCTTTCACCTGAGCTTTTCATTGTACCACTCTTGACCTTTTGTACAGTTACATAGGTAACTCTTTTGGCTTCTAGCTGAATTT GTTTGTTGGAAATGAAAAGCACGCACTGTTTAGATCATTAAAGCTGTGTATCTAAAATTCTATGAGAAGAAAATACTTAACATTATCCTA]
[+] EMBL AK072057             [CGTTATTTTCTTCCTTGTTGCAATGTTACTATTCTTTGCAGTCCAAGGTGATCCTATGAAGCTACAGGCAATATGTACTCTTAGTTTGTTAGTCTTTTATAAATTGCTGCCCTCTAGAAGTGATCGCTTCCAGCCATCCTTGTTGGAAGGGATGCAGACAGTTAATAGCTTTGTAGATGGTCCAACAGATTATGAAGTTTTTTCACAACCTGACCTGGATTGGAGCCTGTATCAATCCTGAAGAAAATTTCAAGGTCAATACACACTTGTTTAGTTATTTCTTATCTCTTTCACCTGAGCTTTTCATTGTACCACTCTTGACCTTTTGTACAGTTACATAGGTAACTCTTTTGGCTTCTAGCTGAATTT GTTTGTTGGAAATGAAAAGCACGCACTGTTTAGATCATTAAAGCTGTGTATCTAAAATTCTATGAGAAGAAAATACTTA           ]
[+] EMBL CB096592             [CGTTATTTTCTTCCTTGTTGCAATGTTACTATTCTTTGCAGTCCAAGGTGATCCTATGAAGCTACAGGCAATATGTACTCTTGGTTTATTAGTCTTTTATAAATTGCTGCCCTCTAGAAGTGATCGCTTCCAGCCATCCTTGTTGGAAGGGATGCAGACAGTTAATAGCTTTGTAGATGGTCCAACAGATTATGAAGTTTTTTCACAACCTGACCTGGATTGGAGCCTGTATCAATCCTGAAGAAAATTTCAAGGTCAATACACACTTGGTTAGNTATTTCTTATCTCTTTCACCTGAGCTTTTCATTGTAACACTCTTGACCTTTTGTACAGGTACATAGGTAACTCTTTTGGCTTCTAGCTGAATTTGGTTTGNTGGAAATGAAA                                                                         ]




>consensus_5443#0
CGTTATTTTCTTCCTTGTTGCAATGTTACTATTCTTTGCAGTCCAAGGTGATCCTATGAA
GCTACAGGCAATATGTACTCTTAGTTTGTTAGTCTTTTATAAATTGCTGCCCTCTAGAAG
TGATCGCTTCCAGCCATCCTTGTTGGAAGGGATGCAGACAGTTAATAGCTTTGTAGATGG
TCCAACAGATTATGAAGTTTTTTCACAACCTGACCTGGATTGGAGCCTGTATCAATCCTG
AAGAAAATTTCAAGGTCAATACACACTTGTTTAGTTATTTCTTATCTCTTTCACCTGAGC
TTTTCATTGTACCACTCTTGACCTTTTGTACAGTTACATAGGTAACTCTTTTGGCTTCTA
GCTGAATTTGTTTGTTGGAAATGAAAAGCACGCACTGTTTAGATCATTAAAGCTGTGTAT
CTAAAATTCTATGAGAAGAAAATACTTAACATTATCCTA

clustalw multiple alignements is not computed in this case