cluster # 5466

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Oryza sativa
cluster # 5466 cluster # 5466 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5466#0 length = 882 sequences # 3

consensusID : consensus_5466#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 882
fasta sequence

                              [AATACGTTCANCATCTTTCTCCCACTCTCCAGAGGGAAAAATANCCAGGACACTTGTTCAAAACCTCTTCATCTAGATTAACCAGAAAAAAGAAAANCCTCCAACCGGGGGATGAAATCAAGAGAAATGGCTATTTACATCCAGTGAGGGACGTCACAAGTTAAATGCGAACATGGATTCTACAGGTAGCTCTTCACAATGGAACTTGAGTTCATTCTGAAATCTCTGTAATACAAAGTGCTCATCCTCTGTTATGAGGGTTGTCACGCTGCAAGCTAACTTGGAGAATGGTTCTCTCCCAGTTCTTCCAGCACGATGCAG-ATAGTCAATAGCCGTCTTGGGAAGGTCATAGTTGTATATGTGGCTGGTTTGTGGGAGGTCAAACCCTCTGCTTGCTATGTCAGTGGAAACTAGAAGAAAGCCTTTTCCCTTGACCTCGGTGAATGATGTAGCACGGGCATTGAAATTCATATCTTCTTCCAGTAGAAGGACCTCTAGGCTTCCCATGTACGTAGTTCTCAGGAATTCAACAACAACAGTAGTTGAAGGAGGGTGTCCAGCCTTCTTTGATTTCTCAGACTGTTCAGCAACAAATATAATCCCTGACTTTGGTGCATCCTTCTCAAGCAAGGATAGTAAAACATGCAACCTTTCCTTCTTACTGCAGATCGCATATTTGTGCTGGAGGTGAGAGGGCATGGGTTGTACAGGGTTGACATGAACATGAACCACATCAGTCTTAGTCCACTTATGTTGCACACAGTCATGCACAAAGCGATTGTGCTGAGGAATCGATGCGCTAGCAAATATGGTCTGACGACTGGAAGCTGCTGAATAAGATGTTAATATTTTGCGAAGAGAGCTTACTTGCTTTGACGACCC]

[-] EMBL CB097015             [AATACGTTCANCATCTTTCTCCCACTCTCCAGAGGGAAAAATANCCAGGACACTTGTTCAAAACCTCTTCATCTAGATTAACCAGAAAAAAGAAAANCCTCCAACCGGGGGATGAAATCAAGAGAAATGGCTATTTACATCCAGTGAGGGACGTCACAAGTTAAATGCGAACATGGATTCTACAGGTAGCTCTTCACAATGGAACTTGAGTTCATTCTGAAATCTCTGTAATACAAAGTGCTCATCCTCTGTTATGAGGGTTGTCACGCTGCAAGCTAACTTGGAGAATGGTTCTCTCCCAGTTCTTCCAGCACGATGCAG ATAGTCAATAGCCGTCTTGGGAAGGTCATAGTTGTATATGTGGCTGGTTTGTGGGAGGTCAAACCCTCTGCTTGCTATGTCAGTGGAAACTAGAAGAAAGCCTTTTCCCTTGACCTCGGTGAATGATGTAGCACGGGCATTGAAATTCATATCTTCTTCCAGTAGAAGGACCTCTAGGCTTCCCATGTACGTAGTTCTCAGGAATTCAACAACAACAGTAGTTGAAGGAGGGTGTCCAGCCTTCTTTGATTTCTCAGACTGTTCAGCAACAAATATAA                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB097044             [   ACGTTCAACATCTTTCT CCACTCTCCAGAGGG AAAATAACCAGGACACTTGTTC AAACCTCTTCATCTAGATTAACCAGAAAAAAGAAAANCCTCCAACCGGGGGATGAAATCAAGAGAAATGGCTATTTACATCCAGTGAGGGACGTCACAAGTTAAATGCGAACATGGATTCTACAGGTAGCTCTTCACAATGGAACTTGAGTTCATTCTGAAATCTCTGTAATACAAAGTGCTCATCCTCTGTTATGAGGGTTGTCACGCTGCAAGCTAACTTGGAGAATGGTTCTCTCCCAGTTCTTCCAGCACGATGCAGAATAGTCAATAGCCGTCTTGGGAAGGTCATAGTTGTATATGTGGCTGGTTTGTGGGAGGTCAAACCCTCTGCTTGCTATGTCAGTGGAAACTAGAAGAAAGCCTTTTCCCTTGACCTCGGTGAATGATGTAGCACGGGCATTGAAATTCATATCTTCTTCCAGTAGAAGGACCTCTAGGCTTCCCATGTACGTAGTTCTCAGGAATTCAACAACAACAGTAGTTGAAGGAGGGTGTCCAGCCTTCTTT ATTTCTCAGACTGTTCAGCAACAAATAa                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB653735             [                                                                                                                                                                   AATGCGAACATGGATTCTACCCGTAGCTCTTCACAATGGAACTTGAGTTCATTCTGAAATCTCTGTAATACAAAGTGCTCATCCTCTGTTATGAGGGTTGTCACGCTGCAAGCTAACTTGGAGAATGGTTCTCTCCCAGTTCTTCCAGCACGATGCAG ATAGTCAATAGCCGTCTTGGGAAGGTCAAAGTTGTATATGTGGCTGGTTTGTGGGAGGTCAAACCCTCTGCTTGCTATGTCAGTGGAAACTAAAAGAAAGCCTTTTCCCTTGACCTCGGTGAATGATGTAGCACGGGCATTGAAATTCATATCTTCTTCCAGTAGAAGGACCTCTAGGCTTCCCATGTACGTAGTTCTCAGGAATTCAACAACAACAGTAGTTGAAGGAGGGTGTCCAGCCTTCTTTGATTTCTCAGACTGTTCAGCAACAAATATAATCCCTGACTTTGGTGCATCCTTCTCAAGCAAGGATAGTAAAACATGCAACCTTTCCTTCTTACTGCAGATCGCATATTTGTGCTGGAGGTGAGAGGGCATGGGTTGTACAGGGTTGACATGAACATGAACCACATCAGTCTTAGTCCACTTATGTTGCACACAGTCATGCACAAAGCGATTGTGCTGAGGAATCGATGCGCTAGCAAATATGGTCTGACGACTGGAAGCTGCTGAATAAGATGTTAATATTTTGCGAAGAGAGCTTACTTGCTTTGACGACCC]




>consensus_5466#0
AATACGTTCANCATCTTTCTCCCACTCTCCAGAGGGAAAAATANCCAGGACACTTGTTCA
AAACCTCTTCATCTAGATTAACCAGAAAAAAGAAAANCCTCCAACCGGGGGATGAAATCA
AGAGAAATGGCTATTTACATCCAGTGAGGGACGTCACAAGTTAAATGCGAACATGGATTC
TACAGGTAGCTCTTCACAATGGAACTTGAGTTCATTCTGAAATCTCTGTAATACAAAGTG
CTCATCCTCTGTTATGAGGGTTGTCACGCTGCAAGCTAACTTGGAGAATGGTTCTCTCCC
AGTTCTTCCAGCACGATGCAGATAGTCAATAGCCGTCTTGGGAAGGTCATAGTTGTATAT
GTGGCTGGTTTGTGGGAGGTCAAACCCTCTGCTTGCTATGTCAGTGGAAACTAGAAGAAA
GCCTTTTCCCTTGACCTCGGTGAATGATGTAGCACGGGCATTGAAATTCATATCTTCTTC
CAGTAGAAGGACCTCTAGGCTTCCCATGTACGTAGTTCTCAGGAATTCAACAACAACAGT
AGTTGAAGGAGGGTGTCCAGCCTTCTTTGATTTCTCAGACTGTTCAGCAACAAATATAAT
CCCTGACTTTGGTGCATCCTTCTCAAGCAAGGATAGTAAAACATGCAACCTTTCCTTCTT
ACTGCAGATCGCATATTTGTGCTGGAGGTGAGAGGGCATGGGTTGTACAGGGTTGACATG
AACATGAACCACATCAGTCTTAGTCCACTTATGTTGCACACAGTCATGCACAAAGCGATT
GTGCTGAGGAATCGATGCGCTAGCAAATATGGTCTGACGACTGGAAGCTGCTGAATAAGA
TGTTAATATTTTGCGAAGAGAGCTTACTTGCTTTGACGACCC

clustalw multiple alignements is not computed in this case