cluster # 5467

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Oryza sativa
cluster # 5467 cluster # 5467 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5467#0 length = 638 sequences # 3

consensusID : consensus_5467#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 638
fasta sequence

                              [GCCCGCCGGAGTCCATCGGCAAGCTCCCCGTCGAGACGCCCTTCTCCGAGGAGAGGAGGGTGGGGCTGACGGCGGCCATGGCCGGGAAGGAGGCGGTGTGGGCGGAGATCGTCGCGGAGGAGAAGCTGGTGGCGACGGAGCTCGGCGAGGTGGCCAACTGGTGGTTCGTCGACGCGCTGTTCATGGACAAGTGGGAGTTCGTCGACACCATGAACAAGAGC-AAGGAGCACGGATTCCTGGGGTTCCGGAACACGCTCAGGTCGTTCGA-GGCGTGGATCGACAAGATGAAGCTTTACAGGATTGTTCCTTGATTAATTTATCTCAGGTTTCTCCTCAATCTCTCGTGGATTAATAATTATA-CCATTAAGATCCGTTAAAATATAATAATTTTTAGCTATTAAATCTGAACAAATAAAATATTTATATTTTAGGGCCGAAGTACATCGGTCTAATACGGTGGCCTCGGGCAACCAAAGTAGTTTGTGGTGTTCTCTCTGGTCATGCATGGTCAATGCTTCCAGGCTTCCAGCGTCAAATCATTTTGACCAAAAGGGGTTAATGGTTTGTAAAACGTTTTGCTGTACATTTGTCCATTGAATTTTCCTCGAAAAATATATACTCCTTTTAAAATAAAAAAA]

[+] EMBL OSC4891              [GCCCGCCGGAGTCCATCGGCAAGCTCCCCGTCGAGACGCCCTTCTCCGAGGAGAGGAGGGTGGGGCTGACGGCGGCCATGGCCGGGAAGGAGGCGGTGTGGGCGGAGATCGTCGCGGAGGAGAAGCTGGTGGCGACGGAGCTCGGCGAGGTGGCCAACTGGTGGTTCGTCGACGCGCTGTTCATGGACAAGTGGGAGTTCGTCGACACCATGAACAAGAGC AAGGAGCACGGATTCCTGGGGTTCCGGAACACGCTCAGGTCGTTCGA GGCGTGGATCGACAAGATGAAGCTTTACAGGATTGTTCCTTGATTAATTTATCTCAGGTTTCTCCTCAATCTCTCGTGGATTAATAATTATA CCATTAAGATCCGTTAAAATATAATAATTTTTAGCTATTAAATCTGAACAAATAAAATATTTATATTTTAGGGCCGAAGTACATC                                                                                                                                                                                                 ]
[+] EMBL AU174425             [                                                                                                                                                                                                                    acCAAGAGCAAAGGAGCCCGGATTCCTGGGGTTCCGGAACACGCTCAGGTCGTTCGAGGGCGTGGATCGACAAGATGAAGCTTTACAGGATTGTTCCTTGATTAATTTATCTCAGGTTTCTCCTCAATCTCTCGTGGATTAATAATTATACCCATT AGATCCGTTAAAATATAATAATTTTTAGCTA TAAATCTGAACAAATAAAATATTTATATTTTAGGACGAAAGTACATCGGTCTAATACGGTGGCCTCGGGCAACCAAAGTAGTTTGTGGTGTTCTCTCTGGTCATGCATGGTCAATGCTTCCAGGCTTCCAGCGTCAAATCATTTTGACCAAAAGGGGTTAATGGTTTGTAAAACGTTTTGCTGTACATTTGTCCATTGAATTTTCCTCGAAAAATATATACTCCTTTTAAAATAAAAAAA]
[+] EMBL CB682697             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAAGCATTTTGTGGTGTTCTCTCTGGTCATGCATGGTCAATGCTTCCAGGCTTCCAGCGTCAAATCATTTTGACCAAAAGGGGTTAATGGTTTGTAAAACGTTTTGCTGTACATTTGTCCATTGAATTTTCCTCGAAAAATATATACTC                 ]




>consensus_5467#0
GCCCGCCGGAGTCCATCGGCAAGCTCCCCGTCGAGACGCCCTTCTCCGAGGAGAGGAGGG
TGGGGCTGACGGCGGCCATGGCCGGGAAGGAGGCGGTGTGGGCGGAGATCGTCGCGGAGG
AGAAGCTGGTGGCGACGGAGCTCGGCGAGGTGGCCAACTGGTGGTTCGTCGACGCGCTGT
TCATGGACAAGTGGGAGTTCGTCGACACCATGAACAAGAGCAAGGAGCACGGATTCCTGG
GGTTCCGGAACACGCTCAGGTCGTTCGAGGCGTGGATCGACAAGATGAAGCTTTACAGGA
TTGTTCCTTGATTAATTTATCTCAGGTTTCTCCTCAATCTCTCGTGGATTAATAATTATA
CCATTAAGATCCGTTAAAATATAATAATTTTTAGCTATTAAATCTGAACAAATAAAATAT
TTATATTTTAGGGCCGAAGTACATCGGTCTAATACGGTGGCCTCGGGCAACCAAAGTAGT
TTGTGGTGTTCTCTCTGGTCATGCATGGTCAATGCTTCCAGGCTTCCAGCGTCAAATCAT
TTTGACCAAAAGGGGTTAATGGTTTGTAAAACGTTTTGCTGTACATTTGTCCATTGAATT
TTCCTCGAAAAATATATACTCCTTTTAAAATAAAAAAA

clustalw multiple alignements is not computed in this case