These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_547#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 867 fasta sequence [ATTATAGCCATTGAATTGAAATCCAGTAATTCCACTTTAGCAACAACTGAGCTTTTCTACATTTTAAACAGGAACAATATAGAGCGAAGAGAACAACGTGGGCATTGGATTTTGCCGATTGAATCATGAGCACATTTGCATAATCAGAAACCGAACGGTGCACCATTTCAGTAACATTGGCACATGGAAAACCCAAATTGCAGCATGCAATTGGAATTTGCACAGGAACAGCAGCACAACGCAGGGGACGCATGCCATTTGCCACCCTGACACCCAAATTTATCTGGGTAACTAGAT-CGCTCC--TCAAG-CCAGTGCA--ACCCATCATAATCC-TCATG-AAAACATGCAACTTAA-CAAGTGCTGACCACTCTGGTGATCT-TCAAATTCTCCGATCCCCATAAACAGTCAATGTAAA-CGCTAAGAAGCGATAGTAG-TTTAGCTTGGTTG-CCAGAT-CAGAACTTGTCCACAACAGTTTCGCTTGGTTG-CCAGTTCAGAATTTCGACCAGTACTCCCAAACTTTCCTCTG-ATTTGTATGACGCATGCATCCAGAAAGGGCAGCAACCTTGTTGTAGTCAGGACCATTTTTCAGCTCAAACTGCTTGCCTAATAATGGATGGCCTTCTATCAAGAAGAAAGCTTTAAGTGATACAGGGAGACCATTCCTCGGCAGTGCCCTAAGTTGAGTGCATCGACCAATTACAAGAATCTTTAGTGAATAAAAGGTGCTCATATCAGGCAGCGATATGAGAGCAGAGCATTCTATAACCTTCATCTTTCTAAGGGAAACAAGTTCATTCAAATCTTCTAGTGATGCTAGCCCATCACAGGATTCAATTCTCAATTCCTCCAAAGCTGTGTGGCAACCAGATT] [+] EMBL CB675818 [ATTATAGCCATTGAATTGAAATCCAGTAATTCCACTTTAGCAACAACTGAGCTTTTCTACATTTTAAACAGGAACAATATAGAGCGAAGAGAACAACGTGGGCATTGGATTTTGCCGATTGAATCATGAGCACATTTGCATAATCAGAAACCGAACGGTGCACCATTTCAGTAACATTGGCACATGGAAAACCCAAATTGCAGCATGCAATTGGAATTTGCACAGGAACAGCAGCACAACGCAGGGGACGCATGCCATTTGCCACCCTGACACCCAAATTTATCTGGGTAACTAGAT CGCTCC TCAAG CCAGTGCA ACCCATCATAATCC TCATG AAAACATGCAACTTAA CAAGTGCTGACCACTCTGGTGATCT TCAAATTCTCCGATCCCCATAAACAGTCAATGTAAA CGCTAAGAAGCGATAGTAG TTTAGCTTGGTTG CCAGAT CAGAACTTGTCCACAACAGTTTCGCTTGGTTG CCAGTTCAGAATTTCGACCAGTACTCCCAAACTTTCCTCTG ATTTGTATGACGCATGCATCCAGAAAGGGCAGCAACCTTGTTGTAGTCAGGACCATTTTTCAGCTCAAACTGCTTGCCTAATAATGGATGGCCTTCTATCAAGAAGAAAGCTTTAAGTGATACAGGGAGACCATTCCTCGGCAGTGCCCTAAGTTGAGTGCATCGACCAATTACAAGAATCTTTAGTGAATAAAAGGTGCTCATATCAGGCAGCGATATGAGAGCAGAGCATTCTAT ] [-] EMBL C91895 [ CTAGATCCGCTCCCTTCAAGCCCANTGCACCCCCCTTCATAANCCTTCATGAAAAACATGCAACTTAACCAAGTGCTGNCCACTCTGGTGATCTCTCAAATTCTCCGATCCCCATAAACAGTCAATGTAAANCGCTAAGAAGCGATANTAGTTTTAGCTTGGTTGCCCAGATCCAGAACTTGTCCACAACAGTTTCGCTTGGTTGCCCAGTTCAGAATTTCGACCAGTACTCCCAAACTTTCCTCTGAATTTGTATGACGCATGCATCCAGAAAGGGCAGCAACCTTGTTGTAGTCAGGACCATTTTTCAGCTCAAACTGCTTGCCTAATAATGGATGGCCTTCTATCAAGAAGAAAGCTTTAAGTGATACAGGGAGACCATTCCTCGGCAGTGCCCTAAGTTGAGTGCATCGACCAATTACAAGAATCTTTAGTGAATAAAAGGTGCTCATATCAGGCAGCGATATGAGAGCAGAGCATTCTATAACCTTCATCTTTCTAAGGGAAACAAGTTCATTCAAATCTTCTAGTGATGCTAGCCCATCACAGGATTCAATTCTCAATTCCTCCAAAGCTGTGTGGCAACCAGATT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||