cluster # 5478

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Oryza sativa
cluster # 5478 cluster # 5478 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5478#0 length = 681 sequences # 3

consensusID : consensus_5478#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 681
fasta sequence

                              [TTTTCTCTCGTCTCCNCCCCCCTTTCCTTCTCTCGCAAGCCGCGG-CG-ATGGCGGCCGTGACCCGCGCGGCGAGATCGCGCGCCCTCCTCCTCCTCCCCCGCGCCTCCGCCGCCGCTCCCCACTTCTCCACCACCGCTTCCTCCGGGGCGGCTGCNGCGGCGGCGGCG-NGGTAGAGGCTGCGGCTGCGGGGGCGTCCGANGCCTCGGCCGCTG-CGCGGCTGGCGCGGGGGAGCAGCCGGCGCCG-CGCCGAAGCGGTGGGGCCTGC-TGAA-GTTTGGCGCCTTCGCGGCGGTGTNCGGGGCTCTCGGCGCCGCCGGGTACTCCAGCTACGCTTATACGCTTGAGGAGGTGGATCAGAAGACGCGGGAGTTCAGGAAGGCCATGACTACGCCGCGCCCCGTTGCGGAGGACGCCTCTGAATTTGAGGTAGTGTCATCTTAAGATATTCGGGGTACCAACTCCATGTATAAAGGAGTGATGGTTGCTTATTAATCCTATGATGCGATATTGTAACTTTGTAANAGTGTAACNCCGGGGTATGGGAAGGAGGGTTCTATTGGCACCTGAGCTGGGAATTTAAGTATTTTACCCTGAATATATTATTGTCAGCTCAGTTTGTTGTAATGCATGAAAGTAATATATCAAAAGTAAGGTCCCGAAGCAATTGCTAAAAAAAAAAAAAAAA]

[-] EMBL AU091943             [TTTTCTCTCGTCTCCNCCCCCCTTTCCTTCTCTCGCAAGCCGCGG CG ATGGCGGCCGTGACCCGCGCGGCGAGATCGCGCGCCCTCCTCCTCCTCCCCCGCGCCTCCGCCGCCGCTCCCCACTTCTCCACCACCGCTTCCTCCGGGGCGGCTGCNGCGGCGGCGGCG NGGTAGAGGCTGCGGCTGCGGGGGCGTCCGANGCCTCGGCCGCTG CGCGGCTGGCGCGGGGGAGCAGCCGGCGCCG CGCCGAAGCGGTGGGGCCTTCTTGAANTTTTGGCGCCTTCGCGGCGGTGTNCGG                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU108187             [                               ngncanAGCCGCGGTNGAATGGCGGCCGTGACCCGCGCGGCGAGATCGCGCGCCCTCCTCCTCCTCCCCCGCGCCTCCGCCGCCGCTCCCCACTTCTCCACCACCGCTTCCTCCGGGGCGGCTGCGGCGGCGGCGGCGCNGTTAGAGGCTGCGGCTGCGGGGGCGTCCGACGCCTCGGCCGCTGCCGCGGCTGGCGCGGGGGAGCAGCCGGCGCCGCCGCCGAAGCGGTGGGGCCTGC TGAA GTTTGGCGCCTTCGCGGCGGTGTNCGGGGCTCTCGGCGCCGCC                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU172781             [                                                                                                                                                                                                                                                                         CTGC TGAA GTTTGGCGCCTTCGCGGCGGTGTGCGGGGCTCTCGGCGCCGCCGGGTACTCCAGCTACGCTTATACGCTTGAGGAGGTGGATCAGAAGACGCGGGAGTTCAGGAAGGCCATGACTACGCCGCGCCCCGTTGCGGAGGACGCCTCTGAATTTGAGGTAGTGTCATCTTAAGATATTCGGGGTACCAACTCCATGTATAAAGGAGTGATGGTTGCTTATTAATCCTATGATGCGATATTGTAACTTTGTAANAGTGTAACNCCGGGGTATGGGAAGGAGGGTTCTATTGGCACCTGAGCTGGGAATTTAAGTATTTTACCCTGAATATATTATTGTCAGCTCAGTTTGTTGTAATGCATGAAAGTAATATATCAAAAGTAAGGTCCCGAAGCAATTGCTAAAAAAAAAAAAAAAA]




>consensus_5478#0
TTTTCTCTCGTCTCCNCCCCCCTTTCCTTCTCTCGCAAGCCGCGGCGATGGCGGCCGTGA
CCCGCGCGGCGAGATCGCGCGCCCTCCTCCTCCTCCCCCGCGCCTCCGCCGCCGCTCCCC
ACTTCTCCACCACCGCTTCCTCCGGGGCGGCTGCNGCGGCGGCGGCGNGGTAGAGGCTGC
GGCTGCGGGGGCGTCCGANGCCTCGGCCGCTGCGCGGCTGGCGCGGGGGAGCAGCCGGCG
CCGCGCCGAAGCGGTGGGGCCTGCTGAAGTTTGGCGCCTTCGCGGCGGTGTNCGGGGCTC
TCGGCGCCGCCGGGTACTCCAGCTACGCTTATACGCTTGAGGAGGTGGATCAGAAGACGC
GGGAGTTCAGGAAGGCCATGACTACGCCGCGCCCCGTTGCGGAGGACGCCTCTGAATTTG
AGGTAGTGTCATCTTAAGATATTCGGGGTACCAACTCCATGTATAAAGGAGTGATGGTTG
CTTATTAATCCTATGATGCGATATTGTAACTTTGTAANAGTGTAACNCCGGGGTATGGGA
AGGAGGGTTCTATTGGCACCTGAGCTGGGAATTTAAGTATTTTACCCTGAATATATTATT
GTCAGCTCAGTTTGTTGTAATGCATGAAAGTAATATATCAAAAGTAAGGTCCCGAAGCAA
TTGCTAAAAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case