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Oryza sativa
cluster # 5527 cluster # 5527       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5527#0 length = 2454 sequences # 2  
consensus_5527#1 length = 731 sequences # 1  

consensusID : consensus_5527#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2454
fasta sequence
                              [CCCACATTATCCTCAGGCGCAACCGCGCTCTCCGTTCTTCCTTCCACCCCAACTCGCCATGGCGCTCGCCGCCGCCTCCGTCTCAGTTCTCCATCTCCCGGCCATCTCCCTCCCGCTCCCTTGCCTTCAGGGCTCAAACCCTAGCCGTCCCAGCCTCGGCTTGACCAATGCCCTCCCGTGGCGCCGACGCGGTGGGCGCGGGGCGGGGGCGGTGGCGGGGGCGGTGCGCTGCGCGAAGCGCACGGGCAAGCGGCGGTACCCGTCGGAGAAGAAGCGGCGGGTTACTGGCGGCTCTCCAAGCTCGCCGTCCCTGCCCGCGACGACCCCGGCAAGGACTTCGCTGGTGTCTCCCCGCCGCTCCTCCAAGCCATCGCCAAAGCACTGAAATTCCCGGTTTCTTCTATGCTCCCTGAAGAGGCCTTCACCGTTATTCGCAAGTCGTTTGATGCACGGAAGATTTTGAAAGAACCTCAATTTGTTTATACCGTTGATGTGGCTGTTAAGAGACTTCTGGATTTGGAGCCGAGAACGTGGGATTTTATTGCTAGATTGGAACCAAAGCTTGGAACAATAGAATACATGCCTGATGAGAAAGTAGCATCTGATCTGGTCAGTATGCTTAATGTTTATAAGCAAGGTTCTGATGGTGAACTGGGAATCAATGATACTGTCAATAATGGCTCTATCTGTAGTCCGCGAAAGAAACCAAGGGTGGCAGTTGTAGGAAGTGGGCCATCAGGCTTGTTTGCCTCCCTTGTTCTAGGTGAACTTGGTGCAGAAGTTACCTTAATAGAGCGTGGTCAACCTGTTGAACAAAGGGGGCGTGATATTGGTGCCTTAGTAGTTAGACGAATTCTCCATTCAGAAAGCAACTTTTGCTTTGGAGAGGGTGGTGCAGGTACATGGAGTGATGGGAAACTTGTGACCAGGATAGGAAGAAACACTGATGGTGTTCAGGCTGTTATGAAAACATTTGTTCAATTTGGAGGTCCTCCAAATATACTAGTTGATGGGAAACCTCACTTGGGTACAGATAAACTTGTTCCTCTGCTGCGGAACTTCAGGCATCACTTAAAAGAGTTGGGTGTTAACATAATATTTAATACTAGAGTAGATGATCTTGTAGTGGAAGGTGGGCAAGTAAAAGGAGTTGTCGTGTCTGACTCAAGACTGCAGCTAGGTTCTCCCAACCAGACACTATCATTTGATGCAGTGGTATTGGCAGTTGGTCACTCAGCTCGTGACACATACAGTATGCTTCTGAGGCATAATGTAGATATGCACCCAAAGAGTTTTGCTGTTGGCTTAAGAATCGAGCACCCCCAAGAACTGATAAACGACATTCAATACTCTGAATTGGCTGCTGAAGTACATAAAGGGCGTGGGCGGATACCTGTAGCAGATTACAAGATAGTGAAATCTTTTGGTGAAGGAGATGCAGAGCTACCAGAACAAAATCGCAGTTGTTACTCATTTTGCATGTGTCCTGGTGGACAGGTTGTTCTAACTAGCACAAACCCATCAGAATTGTGCATCAATGGTATGTCATTCTCAAGGCGTGCATCCAAGTGGGCAAACTCAGCTTTTGTGGCCACTGTGTCATCTCATGACTTTAGGCCATTTGAATCCCATGGTTCTCTTGCAGGCGTTGAATTCCAGAGAGAATTTGAAAGAAGAGCAGCTACCATGGGGGGAGGGAATTTCGTTGTTCCTGCACAGTGTGTCACAGATTTTCTCAGTAACAGATTGTCAGTTACAACTCTCCCACCATCAAGCTATAGGCTGGGAGTTCGGCCATCCAAACTCCATGAGCTATTCCCTTCGCACATAACTGAAGTTCTACAACAATCAATAATAATGATTGAGGAAGAGATGCCAGGATTTGTATCTAGTGAGGCATTACTTCATGGTGTCGAGACAAGAACAAGCTCCCCATTGCAAATTTCACGAAATACCGGTACATATGAGAGCACATCACTGCAAGGGCTGTATCCTATTGGGGAAGGTGCTGGCTATGCAGGGGGTATATTAAGTGCTTCTGTGGATGGTATGTATTGTGGTTTTGCTTTAGCCAAACAGCTTTCTCTATTCCATGGCGATATAGAGTCAACTCTTGGCAAAGCACAAAACCAAAAAGGCTTCGTAAAATATTGAGTATGGATGCGTAATTAGTTGATTGTAGGTATCAGATATTGAAAGATAAATTCACCGTGGTAGCAAATTGCCTAGGAAAACTCCTTATGTAGAGAAGTTGTAATGAGTGCAGTCATAGAAAATATTGAGCGAGTATGTACTATGTAAATGACATCAAAGGTGCTATAGGATAATAGGAGTCTATACCATGTCGCTATGTAATAAACTAGTGAAATTTCTAGGCTAGGAATAACAATATAATAATTAACTTAGAGGACGGCATTTTAATCTTGTAGATTATTCAATAATGCTGCCCACAAA]

[+] EMBL AK065380             [CCCACATTATCCTCAGGCGCAACCGCGCTCTCCGTTCTTCCTTCCACCCCAACTCGCCATGGCGCTCGCCGCCGCCTCCGTCTCAGTTCTCCATCTCCCGGCCATCTCCCTCCCGCTCCCTTGCCTTCAGGGCTCAAACCCTAGCCGTCCCAGCCTCGGCTTGACCAATGCCCTCCCGTGGCGCCGACGCGGTGGGCGCGGGGCGGGGGCGGTGGCGGGGGCGGTGCGCTGCGCGAAGCGCACGGGCAAGCGGCGGTACCCGTCGGAGAAGAAGCGGCGGGTTACTGGCGGCTCTCCAAGCTCGCCGTCCCTGCCCGCGACGACCCCGGCAAGGACTTCGCTGGTGTCTCCCCGCCGCTCCTCCAAGCCATCGCCAAAGCACTGAAATTCCCGGTTTCTTCTATGCTCCCTGAAGAGGCCTTCACCGTTATTCGCAAGTCGTTTGATGCACGGAAGATTTTGAAAGAACCTCAATTTGTTTATACCGTTGATGTGGCTGTTAAGAGACTTCTGGATTTGGAGCCGAGAACGTGGGATTTTATTGCTAGATTGGAACCAAAGCTTGGAACAATAGAATACATGCCTGATGAGAAAGTAGCATCTGATCTGGTCAGTATGCTTAATGTTTATAAGCAAGGTTCTGATGGTGAACTGGGAATCAATGATACTGTCAATAATGGCTCTATCTGTAGTCCGCGAAAGAAACCAAGGGTGGCAGTTGTAGGAAGTGGGCCATCAGGCTTGTTTGCCTCCCTTGTTCTAGGTGAACTTGGTGCAGAAGTTACCTTAATAGAGCGTGGTCAACCTGTTGAACAAAGGGGGCGTGATATTGGTGCCTTAGTAGTTAGACGAATTCTCCATTCAGAAAGCAACTTTTGCTTTGGAGAGGGTGGTGCAGGTACATGGAGTGATGGGAAACTTGTGACCAGGATAGGAAGAAACACTGATGGTGTTCAGGCTGTTATGAAAACATTTGTTCAATTTGGAGGTCCTCCAAATATACTAGTTGATGGGAAACCTCACTTGGGTACAGATAAACTTGTTCCTCTGCTGCGGAACTTCAGGCATCACTTAAAAGAGTTGGGTGTTAACATAATATTTAATACTAGAGTAGATGATCTTGTAGTGGAAGGTGGGCAAGTAAAAGGAGTTGTCGTGTCTGACTCAAGACTGCAGCTAGGTTCTCCCAACCAGACACTATCATTTGATGCAGTGGTATTGGCAGTTGGTCACTCAGCTCGTGACACATACAGTATGCTTCTGAGGCATAATGTAGATATGCACCCAAAGAGTTTTGCTGTTGGCTTAAGAATCGAGCACCCCCAAGAACTGATAAACGACATTCAATACTCTGAATTGGCTGCTGAAGTACATAAAGGGCGTGGGCGGATACCTGTAGCAGATTACAAGATAGTGAAATCTTTTGGTGAAGGAGATGCAGAGCTACCAGAACAAAATCGCAGTTGTTACTCATTTTGCATGTGTCCTGGTGGACAGGTTGTTCTAACTAGCACAAACCCATCAGAATTGTGCATCAATGGTATGTCATTCTCAAGGCGTGCATCCAAGTGGGCAAACTCAGCTTTTGTGGCCACTGTGTCATCTCATGACTTTAGGCCATTTGAATCCCATGGTTCTCTTGCAGGCGTTGAATTCCAGAGAGAATTTGAAAGAAGAGCAGCTACCATGGGGGGAGGGAATTTCGTTGTTCCTGCACAGTGTGTCACAGATTTTCTCAGTAACAGATTGTCAGTTACAACTCTCCCACCATCAAGCTATAGGCTGGGAGTTCGGCCATCCAAACTCCATGAGCTATTCCCTTCGCACATAACTGAAGTTCTACAACAATCAATAATAATGATTGAGGAAGAGATGCCAGGATTTGTATCTAGTGAGGCATTACTTCATGGTGTCGAGACAAGAACAAGCTCCCCATTGCAAATTTCACGAAATACCGGTACATATGAGAGCACATCACTGCAAGGGCTGTATCCTATTGGGGAAGGTGCTGGCTATGCAGGGGGTATATTAAGTGCTTCTGTGGATGGTATGTATTGTGGTTTTGCTTTAGCCAAACAGCTTTCTCTATTCCATGGCGATATAGAGTCAACTCTTGGCAAAGCACAAAACCAAAAAGGCTTCGTAAAATATTGAGTATGGATGCGTAATTAGTTGATTGTAGGTATCAGATATTGAAAGATAAATTCACCGTGGTAGCAAATTGCCTAGGAAAACTCCTTATGTAGAGAAGTTGTAATGAGTGCAGTCATAGAAAATATTGAGCGAGTATGTACTATGTAAATGACATCAAAGGTGCTATAGGATAATAGGAGTCTATACCATGTCGCTATGTAATAAACTAGTGAAATTTCTAGGCTAGGAATAACAATATAATAATTAACTTAGAGGACGGCATTTTAATCTTGTAGATTATTCAATAATGCTGCCCACAAA]
[-] EMBL CB619111             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCTCAGTAACAGATTGTCAGTTACAACTCTCCCAACATCAAGCTATAGGCTGGGAGTTCGGCCATCCAAACTCCATGAGCTATTCCCTTCGCACGTAACTGAAGTTCTACAACAAGCAATAATAATGATTGAGGAAGAGATGCCAGGATTTGTATCTAGTGAGGCATTACTTCATGGTGTCGAGACAAGAACAAGCTCCCCGTTGCAAATTTCACGAAATACCGGTACATATGAGAGCACATCACTGCAAGGGCTGTATCCTATTGGGGAAGGTGCTGGCTATGCAGGGGGTATATTAAGTGCTTCTGTGGATGGTATGTATTGTGGTTTTGCTTTAGCCAAACAGCTTTCTCTATTCCATGGCGATATAGAGTCAACTCTTGGCAAAGCACAAAACCAAAAAGGCTTCGTAAAATATTGAGTATGGATGCGTAA TAGTTGATTGTAGTTATCAGATATTGAAAGATAAATTCACCGTGGTAGCAAATTGCCTAGGAAAACTCCTTATGTAGAGAAGTTGTAATGAGTGCAGTCATAGAAAATATTGAGCGAGTATGTACTATGTAAATGACATCAAAGGTGCTATAGGATAATAGGAGTCTATACCATGTCGCTATGTAATAAACTAGTGAAATTTCTAGGCTAGGAATAACAATATAATAATTAACTTAGAGGACGGCATTTTAATCTTGTAGATTATTCAATAATGTTGCCC     ]


>consensus_5527#0 CCCACATTATCCTCAGGCGCAACCGCGCTCTCCGTTCTTCCTTCCACCCCAACTCGCCAT GGCGCTCGCCGCCGCCTCCGTCTCAGTTCTCCATCTCCCGGCCATCTCCCTCCCGCTCCC TTGCCTTCAGGGCTCAAACCCTAGCCGTCCCAGCCTCGGCTTGACCAATGCCCTCCCGTG GCGCCGACGCGGTGGGCGCGGGGCGGGGGCGGTGGCGGGGGCGGTGCGCTGCGCGAAGCG CACGGGCAAGCGGCGGTACCCGTCGGAGAAGAAGCGGCGGGTTACTGGCGGCTCTCCAAG CTCGCCGTCCCTGCCCGCGACGACCCCGGCAAGGACTTCGCTGGTGTCTCCCCGCCGCTC CTCCAAGCCATCGCCAAAGCACTGAAATTCCCGGTTTCTTCTATGCTCCCTGAAGAGGCC TTCACCGTTATTCGCAAGTCGTTTGATGCACGGAAGATTTTGAAAGAACCTCAATTTGTT TATACCGTTGATGTGGCTGTTAAGAGACTTCTGGATTTGGAGCCGAGAACGTGGGATTTT ATTGCTAGATTGGAACCAAAGCTTGGAACAATAGAATACATGCCTGATGAGAAAGTAGCA TCTGATCTGGTCAGTATGCTTAATGTTTATAAGCAAGGTTCTGATGGTGAACTGGGAATC AATGATACTGTCAATAATGGCTCTATCTGTAGTCCGCGAAAGAAACCAAGGGTGGCAGTT GTAGGAAGTGGGCCATCAGGCTTGTTTGCCTCCCTTGTTCTAGGTGAACTTGGTGCAGAA GTTACCTTAATAGAGCGTGGTCAACCTGTTGAACAAAGGGGGCGTGATATTGGTGCCTTA GTAGTTAGACGAATTCTCCATTCAGAAAGCAACTTTTGCTTTGGAGAGGGTGGTGCAGGT ACATGGAGTGATGGGAAACTTGTGACCAGGATAGGAAGAAACACTGATGGTGTTCAGGCT GTTATGAAAACATTTGTTCAATTTGGAGGTCCTCCAAATATACTAGTTGATGGGAAACCT CACTTGGGTACAGATAAACTTGTTCCTCTGCTGCGGAACTTCAGGCATCACTTAAAAGAG TTGGGTGTTAACATAATATTTAATACTAGAGTAGATGATCTTGTAGTGGAAGGTGGGCAA GTAAAAGGAGTTGTCGTGTCTGACTCAAGACTGCAGCTAGGTTCTCCCAACCAGACACTA TCATTTGATGCAGTGGTATTGGCAGTTGGTCACTCAGCTCGTGACACATACAGTATGCTT CTGAGGCATAATGTAGATATGCACCCAAAGAGTTTTGCTGTTGGCTTAAGAATCGAGCAC CCCCAAGAACTGATAAACGACATTCAATACTCTGAATTGGCTGCTGAAGTACATAAAGGG CGTGGGCGGATACCTGTAGCAGATTACAAGATAGTGAAATCTTTTGGTGAAGGAGATGCA GAGCTACCAGAACAAAATCGCAGTTGTTACTCATTTTGCATGTGTCCTGGTGGACAGGTT GTTCTAACTAGCACAAACCCATCAGAATTGTGCATCAATGGTATGTCATTCTCAAGGCGT GCATCCAAGTGGGCAAACTCAGCTTTTGTGGCCACTGTGTCATCTCATGACTTTAGGCCA TTTGAATCCCATGGTTCTCTTGCAGGCGTTGAATTCCAGAGAGAATTTGAAAGAAGAGCA GCTACCATGGGGGGAGGGAATTTCGTTGTTCCTGCACAGTGTGTCACAGATTTTCTCAGT AACAGATTGTCAGTTACAACTCTCCCACCATCAAGCTATAGGCTGGGAGTTCGGCCATCC AAACTCCATGAGCTATTCCCTTCGCACATAACTGAAGTTCTACAACAATCAATAATAATG ATTGAGGAAGAGATGCCAGGATTTGTATCTAGTGAGGCATTACTTCATGGTGTCGAGACA AGAACAAGCTCCCCATTGCAAATTTCACGAAATACCGGTACATATGAGAGCACATCACTG CAAGGGCTGTATCCTATTGGGGAAGGTGCTGGCTATGCAGGGGGTATATTAAGTGCTTCT GTGGATGGTATGTATTGTGGTTTTGCTTTAGCCAAACAGCTTTCTCTATTCCATGGCGAT ATAGAGTCAACTCTTGGCAAAGCACAAAACCAAAAAGGCTTCGTAAAATATTGAGTATGG ATGCGTAATTAGTTGATTGTAGGTATCAGATATTGAAAGATAAATTCACCGTGGTAGCAA ATTGCCTAGGAAAACTCCTTATGTAGAGAAGTTGTAATGAGTGCAGTCATAGAAAATATT GAGCGAGTATGTACTATGTAAATGACATCAAAGGTGCTATAGGATAATAGGAGTCTATAC CATGTCGCTATGTAATAAACTAGTGAAATTTCTAGGCTAGGAATAACAATATAATAATTA ACTTAGAGGACGGCATTTTAATCTTGTAGATTATTCAATAATGCTGCCCACAAA



consensusID : consensus_5527#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 731
fasta sequence
                              [TCCCTTTGACCAATGCCCTCCCGTGGCGCCGACGCGGTGGGCGCGGGGCGGGGGCGGTGGCGGGGGCGGTGCGCTGCGCGAAGCGCACGGGCAAGCGGCGGTACCCGTCGGAGAAGAAGCGGCTGGATAGGCGACACAAGGAGCTGCTCCGGAAGGCCGCGCCAGAGGAGGGCTCGGCGGGGCGGGAGGCGGGTTACTGGCGGCTCTCCAAGCTCGCCGTCCCTGCCCGCGACGACCCCGGCAAGGACTTCGCTGGTGTCTCCCCGCCGCTCCTCCAAGCCATCGCCAAAGCACTGAAATTCCCGGTTTCTTCTATGCTCCCTGAAGAGGCCTTCACCGTTATTCGCAAGTCGTTTGATGCACGGAAGATTTTGAAAGAACCTCAATTTGTTTATACCGTTGATGTGGATGTTAAGAGACTTCTGGATTTGGAGCCGAGAACGTGGGATTTTATTGCTAGATTGGAACCAAAGCTTGGAACAATAGAATACATGCCTGATGAGAAAGTAGCATCTGATCTGGTCAGTATGCTTAATGTTTATAAGCAAGGTTCTGATGGTGAACTGGGAATCAATGATACTGTCAATAATGGCTCTATCTGTAGTCCGCGAAAGAAACCAAGGGTGGCAGTTGTAGGAAGTGGGCCATCAGGCTTGTTTGCCTCCCTTGTTCTAGGTGAACTTGGTGCAGAAGTTACCTTAATAGAGCGTGGTCAACCTGTTGAACAAAAG]

[+] EMBL CB619110             [TCCCTTTGACCAATGCCCTCCCGTGGCGCCGACGCGGTGGGCGCGGGGCGGGGGCGGTGGCGGGGGCGGTGCGCTGCGCGAAGCGCACGGGCAAGCGGCGGTACCCGTCGGAGAAGAAGCGGCTGGATAGGCGACACAAGGAGCTGCTCCGGAAGGCCGCGCCAGAGGAGGGCTCGGCGGGGCGGGAGGCGGGTTACTGGCGGCTCTCCAAGCTCGCCGTCCCTGCCCGCGACGACCCCGGCAAGGACTTCGCTGGTGTCTCCCCGCCGCTCCTCCAAGCCATCGCCAAAGCACTGAAATTCCCGGTTTCTTCTATGCTCCCTGAAGAGGCCTTCACCGTTATTCGCAAGTCGTTTGATGCACGGAAGATTTTGAAAGAACCTCAATTTGTTTATACCGTTGATGTGGATGTTAAGAGACTTCTGGATTTGGAGCCGAGAACGTGGGATTTTATTGCTAGATTGGAACCAAAGCTTGGAACAATAGAATACATGCCTGATGAGAAAGTAGCATCTGATCTGGTCAGTATGCTTAATGTTTATAAGCAAGGTTCTGATGGTGAACTGGGAATCAATGATACTGTCAATAATGGCTCTATCTGTAGTCCGCGAAAGAAACCAAGGGTGGCAGTTGTAGGAAGTGGGCCATCAGGCTTGTTTGCCTCCCTTGTTCTAGGTGAACTTGGTGCAGAAGTTACCTTAATAGAGCGTGGTCAACCTGTTGAACAAAAG]


>consensus_5527#1 TCCCTTTGACCAATGCCCTCCCGTGGCGCCGACGCGGTGGGCGCGGGGCGGGGGCGGTGG CGGGGGCGGTGCGCTGCGCGAAGCGCACGGGCAAGCGGCGGTACCCGTCGGAGAAGAAGC GGCTGGATAGGCGACACAAGGAGCTGCTCCGGAAGGCCGCGCCAGAGGAGGGCTCGGCGG GGCGGGAGGCGGGTTACTGGCGGCTCTCCAAGCTCGCCGTCCCTGCCCGCGACGACCCCG GCAAGGACTTCGCTGGTGTCTCCCCGCCGCTCCTCCAAGCCATCGCCAAAGCACTGAAAT TCCCGGTTTCTTCTATGCTCCCTGAAGAGGCCTTCACCGTTATTCGCAAGTCGTTTGATG CACGGAAGATTTTGAAAGAACCTCAATTTGTTTATACCGTTGATGTGGATGTTAAGAGAC TTCTGGATTTGGAGCCGAGAACGTGGGATTTTATTGCTAGATTGGAACCAAAGCTTGGAA CAATAGAATACATGCCTGATGAGAAAGTAGCATCTGATCTGGTCAGTATGCTTAATGTTT ATAAGCAAGGTTCTGATGGTGAACTGGGAATCAATGATACTGTCAATAATGGCTCTATCT GTAGTCCGCGAAAGAAACCAAGGGTGGCAGTTGTAGGAAGTGGGCCATCAGGCTTGTTTG CCTCCCTTGTTCTAGGTGAACTTGGTGCAGAAGTTACCTTAATAGAGCGTGGTCAACCTG TTGAACAAAAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5527#0      CCCACATTATCCTCAGGCGCAACCGCGCTCTCCGTTCTTCCTTCCACCCCAACTCGCCAT 60
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      GGCGCTCGCCGCCGCCTCCGTCTCAGTTCTCCATCTCCCGGCCATCTCCCTCCCGCTCCC 120
consensus_5527#1      ---------------------TCCCTTTGACCAATGCCCTCCCGTGGCGC---CGACGCG 36
                                             *  **  ***   ***  ** *  * *   **   * 

consensus_5527#0      TTGCCTTCAGGGCTCAAACCCTAGCCGTCCCAGC-CTCGGCTTGACCAATGCCCTCCCGT 179
consensus_5527#1      GTGGGCGCGGGGCGGGGGCGGTGGCGGGGGCGGTGCGCTGCGCGAAGCGCACGGGCAAGC 96
                       **    * ****     *  * ** *   * *  * * **  **      *   *  * 

consensus_5527#0      GGCGCCGACGCGGTGGGCGCGGGGCGGGGGCGGTGGCGGGGGCGGTGCGCTGCGCGAAGC 239
consensus_5527#1      GGCGGT-ACCCGTCGGAGAAGAAGCGGCTG-GATAGGCGACACAAGGAGCTGCTCCGGAA 154
                      ****   ** **  **    *  ****  * * * *  *   *   * ***** *     

consensus_5527#0      GCACGGGCAAGCGGCGGTACCCGTCGGAGAAGAAGCGGCGGGTTACTGGCGGCTCTCCAA 299
consensus_5527#1      GGCCGCGCCAGAGGAGG-GCTCGGCGGGGCGGGAG--GCGGGTTACTGGCGGCTCTCCAA 211
                      *  ** ** ** ** **  * ** *** *  * **  ***********************

consensus_5527#0      GCTCGCCGTCCCTGCCCGCGACGACCCCGGCAAGGACTTCGCTGGTGTCTCCCCGCCGCT 359
consensus_5527#1      GCTCGCCGTCCCTGCCCGCGACGACCCCGGCAAGGACTTCGCTGGTGTCTCCCCGCCGCT 271
                      ************************************************************

consensus_5527#0      CCTCCAAGCCATCGCCAAAGCACTGAAATTCCCGGTTTCTTCTATGCTCCCTGAAGAGGC 419
consensus_5527#1      CCTCCAAGCCATCGCCAAAGCACTGAAATTCCCGGTTTCTTCTATGCTCCCTGAAGAGGC 331
                      ************************************************************

consensus_5527#0      CTTCACCGTTATTCGCAAGTCGTTTGATGCACGGAAGATTTTGAAAGAACCTCAATTTGT 479
consensus_5527#1      CTTCACCGTTATTCGCAAGTCGTTTGATGCACGGAAGATTTTGAAAGAACCTCAATTTGT 391
                      ************************************************************

consensus_5527#0      TTATACCGTTGATGTGGCTGTTAAGAGACTTCTGGATTTGGAGCCGAGAACGTGGGATTT 539
consensus_5527#1      TTATACCGTTGATGTGGATGTTAAGAGACTTCTGGATTTGGAGCCGAGAACGTGGGATTT 451
                      ***************** ******************************************

consensus_5527#0      TATTGCTAGATTGGAACCAAAGCTTGGAACAATAGAATACATGCCTGATGAGAAAGTAGC 599
consensus_5527#1      TATTGCTAGATTGGAACCAAAGCTTGGAACAATAGAATACATGCCTGATGAGAAAGTAGC 511
                      ************************************************************

consensus_5527#0      ATCTGATCTGGTCAGTATGCTTAATGTTTATAAGCAAGGTTCTGATGGTGAACTGGGAAT 659
consensus_5527#1      ATCTGATCTGGTCAGTATGCTTAATGTTTATAAGCAAGGTTCTGATGGTGAACTGGGAAT 571
                      ************************************************************

consensus_5527#0      CAATGATACTGTCAATAATGGCTCTATCTGTAGTCCGCGAAAGAAACCAAGGGTGGCAGT 719
consensus_5527#1      CAATGATACTGTCAATAATGGCTCTATCTGTAGTCCGCGAAAGAAACCAAGGGTGGCAGT 631
                      ************************************************************

consensus_5527#0      TGTAGGAAGTGGGCCATCAGGCTTGTTTGCCTCCCTTGTTCTAGGTGAACTTGGTGCAGA 779
consensus_5527#1      TGTAGGAAGTGGGCCATCAGGCTTGTTTGCCTCCCTTGTTCTAGGTGAACTTGGTGCAGA 691
                      ************************************************************

consensus_5527#0      AGTTACCTTAATAGAGCGTGGTCAACCTGTTGAACAAAGGGGGCGTGATATTGGTGCCTT 839
consensus_5527#1      AGTTACCTTAATAGAGCGTGGTCAACCTGTTGAACAAAAG-------------------- 731
                      ************************************** *                    

consensus_5527#0      AGTAGTTAGACGAATTCTCCATTCAGAAAGCAACTTTTGCTTTGGAGAGGGTGGTGCAGG 899
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      TACATGGAGTGATGGGAAACTTGTGACCAGGATAGGAAGAAACACTGATGGTGTTCAGGC 959
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      TGTTATGAAAACATTTGTTCAATTTGGAGGTCCTCCAAATATACTAGTTGATGGGAAACC 1019
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      TCACTTGGGTACAGATAAACTTGTTCCTCTGCTGCGGAACTTCAGGCATCACTTAAAAGA 1079
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      GTTGGGTGTTAACATAATATTTAATACTAGAGTAGATGATCTTGTAGTGGAAGGTGGGCA 1139
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      AGTAAAAGGAGTTGTCGTGTCTGACTCAAGACTGCAGCTAGGTTCTCCCAACCAGACACT 1199
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      ATCATTTGATGCAGTGGTATTGGCAGTTGGTCACTCAGCTCGTGACACATACAGTATGCT 1259
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      TCTGAGGCATAATGTAGATATGCACCCAAAGAGTTTTGCTGTTGGCTTAAGAATCGAGCA 1319
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      CCCCCAAGAACTGATAAACGACATTCAATACTCTGAATTGGCTGCTGAAGTACATAAAGG 1379
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      GCGTGGGCGGATACCTGTAGCAGATTACAAGATAGTGAAATCTTTTGGTGAAGGAGATGC 1439
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      AGAGCTACCAGAACAAAATCGCAGTTGTTACTCATTTTGCATGTGTCCTGGTGGACAGGT 1499
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      TGTTCTAACTAGCACAAACCCATCAGAATTGTGCATCAATGGTATGTCATTCTCAAGGCG 1559
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      TGCATCCAAGTGGGCAAACTCAGCTTTTGTGGCCACTGTGTCATCTCATGACTTTAGGCC 1619
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      ATTTGAATCCCATGGTTCTCTTGCAGGCGTTGAATTCCAGAGAGAATTTGAAAGAAGAGC 1679
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      AGCTACCATGGGGGGAGGGAATTTCGTTGTTCCTGCACAGTGTGTCACAGATTTTCTCAG 1739
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      TAACAGATTGTCAGTTACAACTCTCCCACCATCAAGCTATAGGCTGGGAGTTCGGCCATC 1799
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      CAAACTCCATGAGCTATTCCCTTCGCACATAACTGAAGTTCTACAACAATCAATAATAAT 1859
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      GATTGAGGAAGAGATGCCAGGATTTGTATCTAGTGAGGCATTACTTCATGGTGTCGAGAC 1919
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      AAGAACAAGCTCCCCATTGCAAATTTCACGAAATACCGGTACATATGAGAGCACATCACT 1979
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      GCAAGGGCTGTATCCTATTGGGGAAGGTGCTGGCTATGCAGGGGGTATATTAAGTGCTTC 2039
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      TGTGGATGGTATGTATTGTGGTTTTGCTTTAGCCAAACAGCTTTCTCTATTCCATGGCGA 2099
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      TATAGAGTCAACTCTTGGCAAAGCACAAAACCAAAAAGGCTTCGTAAAATATTGAGTATG 2159
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      GATGCGTAATTAGTTGATTGTAGGTATCAGATATTGAAAGATAAATTCACCGTGGTAGCA 2219
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      AATTGCCTAGGAAAACTCCTTATGTAGAGAAGTTGTAATGAGTGCAGTCATAGAAAATAT 2279
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      TGAGCGAGTATGTACTATGTAAATGACATCAAAGGTGCTATAGGATAATAGGAGTCTATA 2339
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      CCATGTCGCTATGTAATAAACTAGTGAAATTTCTAGGCTAGGAATAACAATATAATAATT 2399
consensus_5527#1      ------------------------------------------------------------
                                                                                  

consensus_5527#0      AACTTAGAGGACGGCATTTTAATCTTGTAGATTATTCAATAATGCTGCCCACAAA 2454
consensus_5527#1      -------------------------------------------------------
                                                                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)