cluster # 5581

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5581 cluster # 5581 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5581#0 length = 2418 sequences # 3
consensusID : consensus_5581#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2418
fasta sequence
                              [GCAGTGCACGATCCCATCCCTCCCGCATCGGCAAGGCACCGCCGCGCCGACCGCTCTCCGCACCGCGACGCGACGCGACGCGAGGCGAGGCGAGGCGAGCATGAAGCCCCTGGGCGCGCACGGCGCCGACCTGCTCTGCGGCCCGCGCGTCCTCCGCGCTGCGGCCCTCGCCTTCGCCTGCGCCGCCGCCTTCCTCGTCGGCTACCACTGGTCCGACTCCTCCCCGCGCCTGCTCTTCTTCTCCTCCACCGCCTCCTCCTCCTCCTCGCCGCTCCTCTCCACCGGCTCCCCTTCCGTCGCCGTCTCCCCCAACGCCAACCTCTCCTTCGACCCCTCCCTGATCCCCACCCCTGCCGCCTCCACGCCGCCTGCTTCTCCTACTGCCAATGCCTCGCCCCCACCTTCGCTGCCGCCGCCTCCTCCTCCCCTCCGCCCCCCTCCCCCTCCCGCCCGCCTCGGCATCGTCGGCGAGGACGGCGCGATGCGCGACGACTTCGACGTCGTCGTCGGCGGCGCCAACGACACCGATCTGGCCGCCACCGACGAGGCCCTGCCGCAGGAGCCGACCGACGCGGGCCCCGCCGTCGGGAGCAGGGTTCGGATTGGGAGGTTCCCGGTTTGTCCTGAGAGCATGAGGGAGTACATACCCTGCCTCGACAACGAGGAAGAGATCAGGAGGCTGCCCTCGACGGAGCGTGGCGAGCGGTTCGAGCGGCACTGCCCTGCCAAGGACAAGGGTCTGAGCTGCCTCGTGCCGGCACCCAAGGGGTATAAGGCACCCATTCCTTGGCCTCGGAGCAGAGATGAGGTATGGTTTAGCAATGTACCTCACACGCGGTTGGTTGATGACAAAGGAGGGCAGAATTGGATTAGTAAAGCTAAGGATAAATTTAGATTTCCTGGAGGAGGAACTCAATTTATCCATGGAGCAAATCAATACCTGGATCAGATTTCTCAAATGGTACCAGATATTGCATTTGGCTCTCACACTAGAGTTGCCCTGGATGTTGGCTGTGGAGTAGCAAGTTTTGGTGCATACTTACTTTCACGTGATGTGTTGACATTATCCATAGCTCCCAAAGACGTTCATGAGAATCAGATACAGTTTGCTCTTGAGCGTGGTGTGCCTGCAATGGCAGCAGCATTTGCGACACACCGATTACTATATCCCAGTCAAGCATTTGACTTAATCCATTGTTCACGCTGCCGAATAAATTGGACCCACGATGATGGAATCCTGCTTCTGGAGGTTAATAGAATGCTCAGAGCCGGCGGTTATTTTGCTTGGGCAGCACAGCCTGTTTATAAGCATGAAGAGGCTCAGCAAGAAGCATGGAAAGAGATGGAAGACTTCACTGCAAGACTCTGTTGGGAGCTTGTGAAGAAAGAGGGATATATTGCTATGTGGAGGAAACCATTAAATAACTCATGCTACATGAACCGTGACCCTGGGGTCAAACCTGCACTTTGTGATCCTGATGATAATCCAGATGATGTCTGGTATGTCAATCTGAAAGCATGTATCAGCCGGCTTCCTGAAAACGGTGATGGGCTGACTCCCTTTCCATGGCCTGCACGTTTAATGGAGCCACCAAAAAGGCTTGAAGGTGTTGAAATGGATGCACACTCATCAAAGAAGGAGCTTTTCAAAGCAGAAACCAAATTTTGGGATGACATTGTTGAAGGTTATATTCGTGTTTTTAAGTGGAGAAAGTTCAAACTCCGGAATGTATTGGACATGAGGGCTGGATTTGGAGGGTTTGCAGCTGCATTGATTAATCGTAAACTTGATTGCTGGGTGATGAATGTTGTTCCTGTTAGTGAGCCAAACACACTGCCTGTAATCTATGACCGGGGACTTCTTGGAGTGGCTCATGACTGGTGTGAACCATTTGATACATATCCAAGGACATATGATCTGCTCCATGCGTTTAGCCTATTCTCGAAGGAACAGAAAAGATGTAACATCTCAAGTATCTTGCTGGAGATGGATCGAATACTCAGACCAGGCGGTAGGGCTTACATTCGTGACCTAAAACAAGTTGTACAGGATGTCAAAGAGATAACAACCGCCATGGGATGGCGATCCATCATGCGTGACACCGCAGAAGGCCCGTATGCTAGCAGGAAGGTTTTGATGTGCGACAAGCCGATGGTGCGTTAGCCGATCAGGCTGGTCCAGAGCAATGATGCGAGCCCTGGTTTTGTTTTCCGGAGCCTTTTGAACTGACTACCACAGCTACTACGGACTGGAGATTGACATCTGTTTCAATACATAGGGATAGGTGAATGCCAAAGTTGTAACTAATCAATTTGATTCGTCATTCGTTTGTACAACGACTGATGTAGCCCCTAACGATTGGCTTGTTTTTGTTGTATCATCCACACAACAGTAATTATGAATAGGAGTTAGGAAGG]

[+] EMBL AK070193             [GCAGTGCACGATCCCATCCCTCCCGCATCGGCAAGGCACCGCCGCGCCGACCGCTCTCCGCACCGCGACGCGACGCGACGCGAGGCGAGGCGAGGCGAGCATGAAGCCCCTGGGCGCGCACGGCGCCGACCTGCTCTGCGGCCCGCGCGTCCTCCGCGCTGCGGCCCTCGCCTTCGCCTGCGCCGCCGCCTTCCTCGTCGGCTACCACTGGTCCGACTCCTCCCCGCGCCTGCTCTTCTTCTCCTCCACCGCCTCCTCCTCCTCCTCGCCGCTCCTCTCCACCGGCTCCCCTTCCGTCGCCGTCTCCCCCAACGCCAACCTCTCCTTCGACCCCTCCCTGATCCCCACCCCTGCCGCCTCCACGCCGCCTGCTTCTCCTACTGCCAATGCCTCGCCCCCACCTTCGCTGCCGCCGCCTCCTCCTCCCCTCCGCCCCCCTCCCCCTCCCGCCCGCCTCGGCATCGTCGGCGAGGACGGCGCGATGCGCGACGACTTCGACGTCGTCGTCGGCGGCGCCAACGACACCGATCTGGCCGCCACCGACGAGGCCCTGCCGCAGGAGCCGACCGACGCGGGCCCCGCCGTCGGGAGCAGGGTTCGGATTGGGAGGTTCCCGGTTTGTCCTGAGAGCATGAGGGAGTACATACCCTGCCTCGACAACGAGGAAGAGATCAGGAGGCTGCCCTCGACGGAGCGTGGCGAGCGGTTCGAGCGGCACTGCCCTGCCAAGGACAAGGGTCTGAGCTGCCTCGTGCCGGCACCCAAGGGGTATAAGGCACCCATTCCTTGGCCTCGGAGCAGAGATGAGGTATGGTTTAGCAATGTACCTCACACGCGGTTGGTTGATGACAAAGGAGGGCAGAATTGGATTAGTAAAGCTAAGGATAAATTTAGATTTCCTGGAGGAGGAACTCAATTTATCCATGGAGCAAATCAATACCTGGATCAGATTTCTCAAATGGTACCAGATATTGCATTTGGCTCTCACACTAGAGTTGCCCTGGATGTTGGCTGTGGAGTAGCAAGTTTTGGTGCATACTTACTTTCACGTGATGTGTTGACATTATCCATAGCTCCCAAAGACGTTCATGAGAATCAGATACAGTTTGCTCTTGAGCGTGGTGTGCCTGCAATGGCAGCAGCATTTGCGACACACCGATTACTATATCCCAGTCAAGCATTTGACTTAATCCATTGTTCACGCTGCCGAATAAATTGGACCCACGATGATGGAATCCTGCTTCTGGAGGTTAATAGAATGCTCAGAGCCGGCGGTTATTTTGCTTGGGCAGCACAGCCTGTTTATAAGCATGAAGAGGCTCAGCAAGAAGCATGGAAAGAGATGGAAGACTTCACTGCAAGACTCTGTTGGGAGCTTGTGAAGAAAGAGGGATATATTGCTATGTGGAGGAAACCATTAAATAACTCATGCTACATGAACCGTGACCCTGGGGTCAAACCTGCACTTTGTGATCCTGATGATAATCCAGATGATGTCTGGTATGTCAATCTGAAAGCATGTATCAGCCGGCTTCCTGAAAACGGTGATGGGCTGACTCCCTTTCCATGGCCTGCACGTTTAATGGAGCCACCAAAAAGGCTTGAAGGTGTTGAAATGGATGCACACTCATCAAAGAAGGAGCTTTTCAAAGCAGAAACCAAATTTTGGGATGACATTGTTGAAGGTTATATTCGTGTTTTTAAGTGGAGAAAGTTCAAACTCCGGAATGTATTGGACATGAGGGCTGGATTTGGAGGGTTTGCAGCTGCATTGATTAATCGTAAACTTGATTGCTGGGTGATGAATGTTGTTCCTGTTAGTGAGCCAAACACACTGCCTGTAATCTATGACCGGGGACTTCTTGGAGTGGCTCATGACTGGTGTGAACCATTTGATACATATCCAAGGACATATGATCTGCTCCATGCGTTTAGCCTATTCTCGAAGGAACAGAAAAGATGTAACATCTCAAGTATCTTGCTGGAGATGGATCGAATACTCAGACCAGGCGGTAGGGCTTACATTCGTGACCTAAAACAAGTTGTACAGGATGTCAAAGAGATAACAACCGCCATGGGATGGCGATCCATCATGCGTGACACCGCAGAAGGCCCGTATGCTAGCAGGAAGGTTTTGATGTGCGACAAGCCGATGGTGCGTTAGCCGATCAGGCTGGTCCAGAGCAATGATGCGAGCCCTGGTTTTGTTTTCCGGAGCCTTTTGAACTGACTACCACAGCTACTACGGACTGGAGATTGACATCTGTTTCAATACATAGGGATAGGTGAATGCCAAAGTTGTAACTAATCAATTTGATTCGTCATTCGTTTGTACAACGACTGATGTAGCCCCTAACGATTGGCTTGTTTTTGTTGTATCATCCACACAACAGTAATTATGAATAGGAGTTAGGAAGG]
[+] EMBL AK059069             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATGTGTTGACGTTATCCATAGCTCCCAAAGACGTTCATGAGAATCAGATACAGTTTGCTCTTGAGCGTGGTGTGCCTGCAATGGCAGCAGCATTTGCGACACACCGATTACTATATCCCAGTCAAGCATTTGACTTAATCCATTGTTCACGCTGCCGAATAAATTGGACCCACGATGATGGAATCCTGCTTCTGGAGGTTAATAGAATGCTCAGAGCCGGCGGTTATTTTGCTTGGGCAGCACAGCCTGTTTATAAGCATGAAGAGGCTCAGCAAGAAGCATGGAAAGAGATGGAAGACTTCACTGCAAGACTCTGTTGGGAGCTTGTGAAGAAAGAGGGATATATTGCTATGTGGAGGAAACCATTAAATAACTCATGCTACATGAACCGTGACCCTGGGGTCAAACCTGCACTTTGTGATCCTGATGATAATCCAGATGATGTCTGGTATGTCAATCTGAAAGCATGTATCAGCCGGCTTCCTGAAAACGGTGATGGGCTGACTCCCTTTCCATGGCCTGCACGTTTAATGGAGCCACCAAAAAGGCTTGAAGGTGTTGAAATGGATGCACACTCATCAAAGAAGGAGCTTTTCAAAGCAGAAACCAAATTTTGGGATGACATTGTTGAAGGTTATATTCGTGTTTTTAAGTGGAGAAAGTTCAAACTCCGGAATGTATTGGACATGAGGGCTGGATTTGGAGGGTTTGCAGCTGCATTGATTAATCGTAAACTTGATTGCTGGGTGATGAATGTTGTTCCTGTTAGTGAGCCAAACACACTGCCTGTAATCTATGACCGGGGACTTCTTGGAGTGGCTCATGACTGGTGTGAACCATTTGATACATATCCAAGGACATATGATCTGCTCCATGCGTTTAGCCTATTCTCGAAGGAACAGAAAAGATGTAACATCTCAAGTATCTTGCTGGAGATGGATCGAATACTCAGACCAGGCGGTAGGGCTTACATTCGTGACCTAAAACAAGTTGTACAGGATGTCAAAGAGATAACAACCGCCATGGGATGGCGATCCATCATGCGTGACACCGCAGAAGGCCCGTATGCTAGCAGGAAGGTTTTGATGTGCGACAAGCCGATGGTGCGTTAGCCGATCAGGCTGGTCCAGAGCAATGATGCGAGCCCTGGTTTTGTTTTCCGGAGCCTTTTGAACTGACTACCACAGCTACTACGGACTGGAGATTGACATCTGTTTCAATACATAGGGATAGGTGAATGCCAAAGTTGTAACTAATCAATTTGATTCGTCATTCGTTTGTACAACGACTGATGTAGCCCCTAACGATTGGCTTGTTTTTGTTGTATCATCCACACAACAGTAATTATGAATAGGAGTTAGGAAGG]
[+] EMBL CB621547             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AATAACTCATGCTACATGAACCGTGACCCTGGGGTCAAACCTGCACTTTGTGATCCTGATGATAATCCAGATGATGTCTGGTATGTCAATCTGAAAGCATGTATCAGCCGGCTTCCTGAAAACGGTGATGGGCCGACTCCCTTTCCATGGCCTGCACGTTTAATGGAGCCACCAAAAAGGCTTGAAGGTGTTGAAATGGATGCACACTCATCAAAGAAGGAGCTTTTCAAAGCAGAAACCAAATTTTGGGATGACATTGTTGAAGGTTATATTCGTGTTTTTAAGTGGAGAAAGTTCAAACTCCGGAATGTATTGGACATGAGGGCTGGATTTGGAGGGTTTGCAGCTGCATTGATTAATCGTAAACTTGATTGCTGGGTGATGAATGTTGTTCCTGTTAGTGAGCCAAACACACTGCCTGTAATCTATGACCGGGGACTTCTTGGAGTGGCTCATGACTGGTGTGAACCATTTGATACATATCCAAGGACATATGATCTGCTCCATGCGTTTAGCCTATTCTCGAAGGAACAGAAAAGATGTAACATCTCAAGTATCTTGCTGGAGATGGATCGAATACTCAGACCAGGCGGTAGGGCTTACATTCGTGACCTAAAACAAGTTGTACAGGATGTCAAAGAGATAACAACCGCCATGGGATGGCGATCCATCATGCGTGACACCGCAGAAGGCCCGTATGCTAGCAGGAAGGTTTTGATGTGCGACAAGCCGATGGTGCGTTAGCCGATCAGGCTGGTCCAGAGCAATGATGCGAGCCCTGGTTTTGTTTTCCGGAGCCTTTTGAACTGACTAC                                                                                                                                                                                        ]




>consensus_5581#0
GCAGTGCACGATCCCATCCCTCCCGCATCGGCAAGGCACCGCCGCGCCGACCGCTCTCCG
CACCGCGACGCGACGCGACGCGAGGCGAGGCGAGGCGAGCATGAAGCCCCTGGGCGCGCA
CGGCGCCGACCTGCTCTGCGGCCCGCGCGTCCTCCGCGCTGCGGCCCTCGCCTTCGCCTG
CGCCGCCGCCTTCCTCGTCGGCTACCACTGGTCCGACTCCTCCCCGCGCCTGCTCTTCTT
CTCCTCCACCGCCTCCTCCTCCTCCTCGCCGCTCCTCTCCACCGGCTCCCCTTCCGTCGC
CGTCTCCCCCAACGCCAACCTCTCCTTCGACCCCTCCCTGATCCCCACCCCTGCCGCCTC
CACGCCGCCTGCTTCTCCTACTGCCAATGCCTCGCCCCCACCTTCGCTGCCGCCGCCTCC
TCCTCCCCTCCGCCCCCCTCCCCCTCCCGCCCGCCTCGGCATCGTCGGCGAGGACGGCGC
GATGCGCGACGACTTCGACGTCGTCGTCGGCGGCGCCAACGACACCGATCTGGCCGCCAC
CGACGAGGCCCTGCCGCAGGAGCCGACCGACGCGGGCCCCGCCGTCGGGAGCAGGGTTCG
GATTGGGAGGTTCCCGGTTTGTCCTGAGAGCATGAGGGAGTACATACCCTGCCTCGACAA
CGAGGAAGAGATCAGGAGGCTGCCCTCGACGGAGCGTGGCGAGCGGTTCGAGCGGCACTG
CCCTGCCAAGGACAAGGGTCTGAGCTGCCTCGTGCCGGCACCCAAGGGGTATAAGGCACC
CATTCCTTGGCCTCGGAGCAGAGATGAGGTATGGTTTAGCAATGTACCTCACACGCGGTT
GGTTGATGACAAAGGAGGGCAGAATTGGATTAGTAAAGCTAAGGATAAATTTAGATTTCC
TGGAGGAGGAACTCAATTTATCCATGGAGCAAATCAATACCTGGATCAGATTTCTCAAAT
GGTACCAGATATTGCATTTGGCTCTCACACTAGAGTTGCCCTGGATGTTGGCTGTGGAGT
AGCAAGTTTTGGTGCATACTTACTTTCACGTGATGTGTTGACATTATCCATAGCTCCCAA
AGACGTTCATGAGAATCAGATACAGTTTGCTCTTGAGCGTGGTGTGCCTGCAATGGCAGC
AGCATTTGCGACACACCGATTACTATATCCCAGTCAAGCATTTGACTTAATCCATTGTTC
ACGCTGCCGAATAAATTGGACCCACGATGATGGAATCCTGCTTCTGGAGGTTAATAGAAT
GCTCAGAGCCGGCGGTTATTTTGCTTGGGCAGCACAGCCTGTTTATAAGCATGAAGAGGC
TCAGCAAGAAGCATGGAAAGAGATGGAAGACTTCACTGCAAGACTCTGTTGGGAGCTTGT
GAAGAAAGAGGGATATATTGCTATGTGGAGGAAACCATTAAATAACTCATGCTACATGAA
CCGTGACCCTGGGGTCAAACCTGCACTTTGTGATCCTGATGATAATCCAGATGATGTCTG
GTATGTCAATCTGAAAGCATGTATCAGCCGGCTTCCTGAAAACGGTGATGGGCTGACTCC
CTTTCCATGGCCTGCACGTTTAATGGAGCCACCAAAAAGGCTTGAAGGTGTTGAAATGGA
TGCACACTCATCAAAGAAGGAGCTTTTCAAAGCAGAAACCAAATTTTGGGATGACATTGT
TGAAGGTTATATTCGTGTTTTTAAGTGGAGAAAGTTCAAACTCCGGAATGTATTGGACAT
GAGGGCTGGATTTGGAGGGTTTGCAGCTGCATTGATTAATCGTAAACTTGATTGCTGGGT
GATGAATGTTGTTCCTGTTAGTGAGCCAAACACACTGCCTGTAATCTATGACCGGGGACT
TCTTGGAGTGGCTCATGACTGGTGTGAACCATTTGATACATATCCAAGGACATATGATCT
GCTCCATGCGTTTAGCCTATTCTCGAAGGAACAGAAAAGATGTAACATCTCAAGTATCTT
GCTGGAGATGGATCGAATACTCAGACCAGGCGGTAGGGCTTACATTCGTGACCTAAAACA
AGTTGTACAGGATGTCAAAGAGATAACAACCGCCATGGGATGGCGATCCATCATGCGTGA
CACCGCAGAAGGCCCGTATGCTAGCAGGAAGGTTTTGATGTGCGACAAGCCGATGGTGCG
TTAGCCGATCAGGCTGGTCCAGAGCAATGATGCGAGCCCTGGTTTTGTTTTCCGGAGCCT
TTTGAACTGACTACCACAGCTACTACGGACTGGAGATTGACATCTGTTTCAATACATAGG
GATAGGTGAATGCCAAAGTTGTAACTAATCAATTTGATTCGTCATTCGTTTGTACAACGA
CTGATGTAGCCCCTAACGATTGGCTTGTTTTTGTTGTATCATCCACACAACAGTAATTAT
GAATAGGAGTTAGGAAGG
clustalw multiple alignements is not computed in this case