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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5582 cluster # 5582       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5582#0 length = 621 sequences # 3  

consensusID : consensus_5582#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 621
fasta sequence
                              [GCACTATCCCCGGCACAGGCCTTTCAGGGGGTGGAGGTTGATGAGGAGGTGCATGAAACTGAGAATGAGAGGCAAGCTTGTGGATGTGAACCGGGCTGCTCAAACTGCTTGCAGTCTGTGTGCCAGTCTCGTAGTCATCCTGGCTTGCAAGGCTTTGGGGGTATGAGTTCTGAAGAGG-AG---ACAGTCTCATCTCACCTCTTGATTCCTTTGTGCCGCTGTAGTCAACACTCATGCTACTCCTAACACTGGCATTTCCGCTGGAGCTAAGATCACCTTCATGACCACGGCGAGCG-TCTACTGG-TCGGAGAACAGAGGATGATGCCCGAGCTTTTGCTGCAGCTTTCATAACCTCATTTCTATCTAGCTT-TGCAAGGCTCCGGGCA-CTGATTTTGACAGGCTTCTTAGATTTGTTTGCTCTTCGGCATATCAGCAGCATTCAGATCACCCGTGGAGGTACCATCCCAGGGTCCAACTGTGGACACCTCATCCTGATCAATAATAATCTTGGAAGGGGGCACCAACACCCTTGGGGTGGAAGGCAAGGGAGCTTCCCACACTGAATCCCCGTGGTTTTGCTGGAAAATTTGAGGAAGGGGGGGGGGGNAGAAAAANNNNNNNNNN]

[-] EMBL AU093319             [GCACTATCCCCGGCACAGGCCTTTCAGGGGGTGGAGGTTGATGAGGAGGTGCATGAAACTGAGAATGAGAGGCAAGCTTGTGGATGTGAACCGGGCTGCTCAAACTGCTTGCAGTCTGTGTGCCAGTCTCGTAGTCATCCTGGCTTGCAAGGCTTTGGGGGTATGAGTTCTGAAGAGG AG   ACAGTCTCATCTCACCTCTTGATTCCTTTGTGCCGCTGTAGTCAACACTCATGCTACTCCTAACACTGGCATTTCCGCTGGAGCTAAGATCACCTTCATGACCACGGCGAGCG TCTACTGG TCGGAGAACAGAGGATGATGCCCGAGCTTTTGCTGCAGCTTTCATAACCTCATTTCTATCTAGCTT TGCAAGGCTCCGGGCA CTGATTTTGACAGGCTTCTTAGATTTGTTTGCTCT                                                                                                                                                                                                           ]
[+] EMBL CA759900             [           GGCACAGGCCTTTCAGGGGGTGGAGGTTGATGAGGAGGTGCATGAAACTGAGAATGAGAGGCAAGCTTGTGGATGTGAACCGGGCTGCTCAAACTGCTTGCAGTCTGTGTGCCAGTCTCGTAGTCATCCTGGCTTGCAAGGCTTTGGGGGTACGAGTTCTGAAGAGGNAGNNNACAGTCTCATCTCACCTCTTGATTCCTTTGTGCCGCTGTAGTCAACACTCATGCTACTCCTAACACTGGCATTTCCGCTGGAGCTAAGATCACCTTCATGACCACGGCGAGCG TCTACTGG TCGGAGAACAGAGGATGATGCCCGAGCTTTTGCTGCAGC TTCAT ACCTCA TTCTATCTAGCTTNTGC AGGCTCCNGGCACCTGA TTCGACAGGCTTCTTAGA TTGGTTGCTCTTCGGCATATCAGCAGCATTCAGATCACCCGTGGAGGTACCATCCCAGGGTCCAACTGTGGACACCTCATCCTGATCAATAATAATCTTGGAAGGGGGCACCAACACCCTTGGGGTGGAAGGCAAGGGAGCTTCCCACACTGAATCCCCGTGGTTTTGCTGGAAAATTTGAGGAAGGGGGGGGGGGNAGAAAAANNNNNNNNNN]
[-] EMBL AA751751             [                                                                        CAAGCTTGTGGATGTGAACCGGGCTGCTCAAACTGCTTGCAGTCTGTGTGCCAGTCTCGTAGTCATCCTGGCTTGCAAGGCTTTGGGGGTATGAGTTCTGAAGAGG AG   ACAGTCTCATCTCACCTCTTGATTCCTTTGTGCCGCTGTAGTCAACACTCATGCTACTCCTAACACTGGCATTTCCGCTGGAGCTAAGATCACCTTCATGACCACGGCGAGCGTTCTACTGGTTCGGAGAACAGAGGATGATGCCCGAGCTTTTGCTGCA                                                                                                                                                                                                                                                                                             ]


>consensus_5582#0 GCACTATCCCCGGCACAGGCCTTTCAGGGGGTGGAGGTTGATGAGGAGGTGCATGAAACT GAGAATGAGAGGCAAGCTTGTGGATGTGAACCGGGCTGCTCAAACTGCTTGCAGTCTGTG TGCCAGTCTCGTAGTCATCCTGGCTTGCAAGGCTTTGGGGGTATGAGTTCTGAAGAGGAG ACAGTCTCATCTCACCTCTTGATTCCTTTGTGCCGCTGTAGTCAACACTCATGCTACTCC TAACACTGGCATTTCCGCTGGAGCTAAGATCACCTTCATGACCACGGCGAGCGTCTACTG GTCGGAGAACAGAGGATGATGCCCGAGCTTTTGCTGCAGCTTTCATAACCTCATTTCTAT CTAGCTTTGCAAGGCTCCGGGCACTGATTTTGACAGGCTTCTTAGATTTGTTTGCTCTTC GGCATATCAGCAGCATTCAGATCACCCGTGGAGGTACCATCCCAGGGTCCAACTGTGGAC ACCTCATCCTGATCAATAATAATCTTGGAAGGGGGCACCAACACCCTTGGGGTGGAAGGC AAGGGAGCTTCCCACACTGAATCCCCGTGGTTTTGCTGGAAAATTTGAGGAAGGGGGGGG GGGNAGAAAAANNNNNNNNNN



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)