cluster # 5582

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Oryza sativa
cluster # 5582 cluster # 5582 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5582#0 length = 621 sequences # 3

consensusID : consensus_5582#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 621
fasta sequence

                              [GCACTATCCCCGGCACAGGCCTTTCAGGGGGTGGAGGTTGATGAGGAGGTGCATGAAACTGAGAATGAGAGGCAAGCTTGTGGATGTGAACCGGGCTGCTCAAACTGCTTGCAGTCTGTGTGCCAGTCTCGTAGTCATCCTGGCTTGCAAGGCTTTGGGGGTATGAGTTCTGAAGAGG-AG---ACAGTCTCATCTCACCTCTTGATTCCTTTGTGCCGCTGTAGTCAACACTCATGCTACTCCTAACACTGGCATTTCCGCTGGAGCTAAGATCACCTTCATGACCACGGCGAGCG-TCTACTGG-TCGGAGAACAGAGGATGATGCCCGAGCTTTTGCTGCAGCTTTCATAACCTCATTTCTATCTAGCTT-TGCAAGGCTCCGGGCA-CTGATTTTGACAGGCTTCTTAGATTTGTTTGCTCTTCGGCATATCAGCAGCATTCAGATCACCCGTGGAGGTACCATCCCAGGGTCCAACTGTGGACACCTCATCCTGATCAATAATAATCTTGGAAGGGGGCACCAACACCCTTGGGGTGGAAGGCAAGGGAGCTTCCCACACTGAATCCCCGTGGTTTTGCTGGAAAATTTGAGGAAGGGGGGGGGGGNAGAAAAANNNNNNNNNN]

[-] EMBL AU093319             [GCACTATCCCCGGCACAGGCCTTTCAGGGGGTGGAGGTTGATGAGGAGGTGCATGAAACTGAGAATGAGAGGCAAGCTTGTGGATGTGAACCGGGCTGCTCAAACTGCTTGCAGTCTGTGTGCCAGTCTCGTAGTCATCCTGGCTTGCAAGGCTTTGGGGGTATGAGTTCTGAAGAGG AG   ACAGTCTCATCTCACCTCTTGATTCCTTTGTGCCGCTGTAGTCAACACTCATGCTACTCCTAACACTGGCATTTCCGCTGGAGCTAAGATCACCTTCATGACCACGGCGAGCG TCTACTGG TCGGAGAACAGAGGATGATGCCCGAGCTTTTGCTGCAGCTTTCATAACCTCATTTCTATCTAGCTT TGCAAGGCTCCGGGCA CTGATTTTGACAGGCTTCTTAGATTTGTTTGCTCT                                                                                                                                                                                                           ]
[+] EMBL CA759900             [           GGCACAGGCCTTTCAGGGGGTGGAGGTTGATGAGGAGGTGCATGAAACTGAGAATGAGAGGCAAGCTTGTGGATGTGAACCGGGCTGCTCAAACTGCTTGCAGTCTGTGTGCCAGTCTCGTAGTCATCCTGGCTTGCAAGGCTTTGGGGGTACGAGTTCTGAAGAGGNAGNNNACAGTCTCATCTCACCTCTTGATTCCTTTGTGCCGCTGTAGTCAACACTCATGCTACTCCTAACACTGGCATTTCCGCTGGAGCTAAGATCACCTTCATGACCACGGCGAGCG TCTACTGG TCGGAGAACAGAGGATGATGCCCGAGCTTTTGCTGCAGC TTCAT ACCTCA TTCTATCTAGCTTNTGC AGGCTCCNGGCACCTGA TTCGACAGGCTTCTTAGA TTGGTTGCTCTTCGGCATATCAGCAGCATTCAGATCACCCGTGGAGGTACCATCCCAGGGTCCAACTGTGGACACCTCATCCTGATCAATAATAATCTTGGAAGGGGGCACCAACACCCTTGGGGTGGAAGGCAAGGGAGCTTCCCACACTGAATCCCCGTGGTTTTGCTGGAAAATTTGAGGAAGGGGGGGGGGGNAGAAAAANNNNNNNNNN]
[-] EMBL AA751751             [                                                                        CAAGCTTGTGGATGTGAACCGGGCTGCTCAAACTGCTTGCAGTCTGTGTGCCAGTCTCGTAGTCATCCTGGCTTGCAAGGCTTTGGGGGTATGAGTTCTGAAGAGG AG   ACAGTCTCATCTCACCTCTTGATTCCTTTGTGCCGCTGTAGTCAACACTCATGCTACTCCTAACACTGGCATTTCCGCTGGAGCTAAGATCACCTTCATGACCACGGCGAGCGTTCTACTGGTTCGGAGAACAGAGGATGATGCCCGAGCTTTTGCTGCA                                                                                                                                                                                                                                                                                             ]




>consensus_5582#0
GCACTATCCCCGGCACAGGCCTTTCAGGGGGTGGAGGTTGATGAGGAGGTGCATGAAACT
GAGAATGAGAGGCAAGCTTGTGGATGTGAACCGGGCTGCTCAAACTGCTTGCAGTCTGTG
TGCCAGTCTCGTAGTCATCCTGGCTTGCAAGGCTTTGGGGGTATGAGTTCTGAAGAGGAG
ACAGTCTCATCTCACCTCTTGATTCCTTTGTGCCGCTGTAGTCAACACTCATGCTACTCC
TAACACTGGCATTTCCGCTGGAGCTAAGATCACCTTCATGACCACGGCGAGCGTCTACTG
GTCGGAGAACAGAGGATGATGCCCGAGCTTTTGCTGCAGCTTTCATAACCTCATTTCTAT
CTAGCTTTGCAAGGCTCCGGGCACTGATTTTGACAGGCTTCTTAGATTTGTTTGCTCTTC
GGCATATCAGCAGCATTCAGATCACCCGTGGAGGTACCATCCCAGGGTCCAACTGTGGAC
ACCTCATCCTGATCAATAATAATCTTGGAAGGGGGCACCAACACCCTTGGGGTGGAAGGC
AAGGGAGCTTCCCACACTGAATCCCCGTGGTTTTGCTGGAAAATTTGAGGAAGGGGGGGG
GGGNAGAAAAANNNNNNNNNN

clustalw multiple alignements is not computed in this case