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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5587 cluster # 5587       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5587#0 length = 1060 sequences # 3  

consensusID : consensus_5587#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1060
fasta sequence
                              [TTTTTTTTTGTACCAAAAGTCCATCCTACTCGTTTGCATGCTTAAGCCCATCAATACTTGGTCCCAATCTTGGAGCTCATGAACAATACAAGGTTTCCCAATTTCCAGTCTAAAATACAGTAGCGATTTACAGTGGAATCAGCTATTTTGAGCTCCAACTGTACAAAATCTTCAGATGCCACATGAAAACCATACACTATGGGGAGCCAAGATATGGAAACAGGCAACGGCAACGAATGGTTAGGGGGCCTCCATCTATACAAAAATTGATACTGCGAGCGCTTTACGATTCACCAAGCAACCGTGCAAGCTATACCAGCTGCTCATTTTTCAATCTTCATGGAACCAGAATTGTTGGTGCTGCCCTCTGCCATTGCGCCACCAGGGTTGTAGTTCAAGTGAGGAATGTTCTGAAGTCCTTCCCACATGGCAGGTATCTGGTTAACTGTGGAGATGTCCTGAATTGTTGTCCCCTGCAAAACATCTGCAGGATTGGAAA-CATTACACAGCATTTCTGGCTGCATGATTCCTTGGTTAAAATGAGCAACGAGGGCAC-TTGATCCTGGGTCGACTCCGTAGAAAGCAAGATGTCTATCTTGTGAAAGCATCATTTGTTTCGACAGAATCTGCTCAATATCAAAGCTAAGCTCAGGGTTGACAGTTGCGAGTTTCATCGACAAAAACTCAACTTGACGTTGTAGTGACTGTACATAATTGATTATCTCATCAAGCATGACTGCCTTACCAGTGATCTTACTGCAGCCTGGGACAAGATCTTGAAGCAGCTTCATCCTCTCGCTTATCTTTTTTCTCCTCAGTCTTTCTGCAAGGCTGTGGCTATTAGTGGCTTGGCCTCGCTTTGCCCGGACATGAACATAATCTTCTTTAGTACCATCACCATCAGAAGAATCTTCCTTGCTTTGCATTTTGGAGCAACTCTTTTGGTTGTCCTCCTCCATTGATATCCTCTCTTGCTGAGATGAAACCTCTGTCTGTTGATCACCAACATTTTGTATCCTGCTACTTGCTGATGGGTTCAACAAGGCAATGTGATCATCTA]

[+] EMBL CA762021             [TTTTTTTTTGTACCAAAAGTCCATCCTACTCGTTTGCATGCTTAAGCCCATCAATACTTGGTCCCAATCTTGGAGCTCATGAACAATACAAGGTTTCCCAATTTCCAGTCTAAAATACAGTAGCGATTTACAGTGGAATCAGCTATTTTGAGCTCCAACTGTACAAAATCTTCAGATGCCACATGAAAACCATACACTATGGGGAGCCAAGATATGGAAACAGGCAACGGCAACGAATGGTTAGGGGGCCTCCATCTATACAAAAATTGATACTGCGAGCGCTTTACGATTCACCAAGCAACCGTGCAAGCTATACCAGCTGCTCATTTTTCAATCTTCATGGAACCAGAATTGTTGGTGCTGCCCTCTGCCATTGCGCCACCAGGGTTGTAGTTCAAGTGAGGAATGTTCTGAAGTCCTTCCCACATGGCAGGTATCTGGTTAACTGTGGAGATGCCCTGAATTGTTGTCCCCTGCAAAACATCTGCAGGATTGGAAA CATTACACAGCATTTCTGGCTGCATGATTCCTTGGTTAAAATGAGCAACGAGGGCAC TTGATCCTGGGTCGACTCCNTAGAAAGCAAGATGTCTATCTTGTGAAAGCATCATTTGTTTCGACAGAATCTGCTCAATATCAAAGCTAAGCTCAGGGTTGACAGTTGCGAGTTTCATCGACAAAAACTCAACTTGACG                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB631822             [          TACCAAAAGTCCATCCTACTCGTTTGCATGCTTCAGCCCATCAATACTTGGTCCCAATCTTGGAGCTCATGAACAATACAAGGTTTCCCAATTTCCAGTCTAAAATACAGTAGCGATTTACAGTGGAATCAGCTATTTTGAGCTCCAACTGTACAAAATCTTCAGATGCCACATGAAAACCATACACTATGGGGAGCCAAGATATGGAAACAGGCAACGGCAACGAATGGTTAGGGGGCCTCCATCTATACAAAAATTGATACTGCGAGCGCTTTACGATTCACCAAGCAACCGTGCAAGCTATACCAGCTGCTCATTTTTCAATCTTCATGGAACCAGAATTGTTGGTGCTGCCCTCTGCCATTGCGCCACCAGGGTTGTAGTTCAAGTGAGGAATGTTCTGAAGTCCTTCCCACATGGCAGGTATCTGGTTAACTGTGGAGATGTCCTGAATTGTTGTCCCCTGCAAAACATCTGCAGGATTGGAAA CATTACACAGCATTTCTGGCTGCATGATTCCTTGGTTAAAATGAGCAACGAGGGCAC TTGATCCTGGGTCGACTCCGTAGAAAGCAAGATGTCTATCTTGTGAAAGCATCATTTGTTTCGACAGAATCTGCTCAATATCAAAGCTAAGCTCAGGGTTGACAGTTGCGAGTTTCATCGACAAAAACTCAACTTGACGTTGTAGTGACTGTACATAATTGATTATCTCATCAAGCATGACTGCCTTACCAGTGATCTTACTGCAGCCTGGGACAAGATCTTGAAGCAGCTTCATCCT                                                                                                                                                                                                                                                                          ]
[-] EMBL BP184497             [                                                                                                                                                                                                                                                                                                                                                                                                                           TGAAGTCCTTCCCACATGGCAGGTATCTGGTTAACTGTGGAGATGTCCTGAATTGTTGTCCCCTGCAAAACATCTGCAGGATTGGAAACCATTACACAGCATTTCTGGCTGCATGATTCCTTGGTTAAAATGAGCAACGAGGGCACTTTGATCCTGGGTCGACTCCGTAGAAAGCAAGATGTCTATCTTGTGAAAGCATCATTTGTTTCGATAGAATCTGCTCAATATCAAAGCTAAGCTCAGGGTTGACAGTTGCGAGTTTCATCGACAAAAACTCAACTTGACGTTGTAGTGACTGTACATAATTGATTATCTCATCAAGCATGACTGCCTTACCAGTGATCTTACTGCAGCCTGGGACAAGATCTTGAAGCAGCTTCATCCTCTCGCTTATCTTTTTTCTCCTCAGTCTTTCTGCAAGGCTGTGGCTATTAGTGGCTTGGCCTCGCTTTGCCCGGACATGAACATAATCTTCTTTAGTACCATCACCATCAGAAGAATCTTCCTTGCTTTGCATTTTGGAGCAACTCTTTTGGTTGTCCTCCTCCATTGATATCCTCTCTTGCTGAGATGAAACCTCTGTCTGTTGATCACCAACATTTTGTATCCTGCTACTTGCTGATGGGTTCAACAAGGCAATGTGATCATCTA]


>consensus_5587#0 TTTTTTTTTGTACCAAAAGTCCATCCTACTCGTTTGCATGCTTAAGCCCATCAATACTTG GTCCCAATCTTGGAGCTCATGAACAATACAAGGTTTCCCAATTTCCAGTCTAAAATACAG TAGCGATTTACAGTGGAATCAGCTATTTTGAGCTCCAACTGTACAAAATCTTCAGATGCC ACATGAAAACCATACACTATGGGGAGCCAAGATATGGAAACAGGCAACGGCAACGAATGG TTAGGGGGCCTCCATCTATACAAAAATTGATACTGCGAGCGCTTTACGATTCACCAAGCA ACCGTGCAAGCTATACCAGCTGCTCATTTTTCAATCTTCATGGAACCAGAATTGTTGGTG CTGCCCTCTGCCATTGCGCCACCAGGGTTGTAGTTCAAGTGAGGAATGTTCTGAAGTCCT TCCCACATGGCAGGTATCTGGTTAACTGTGGAGATGTCCTGAATTGTTGTCCCCTGCAAA ACATCTGCAGGATTGGAAACATTACACAGCATTTCTGGCTGCATGATTCCTTGGTTAAAA TGAGCAACGAGGGCACTTGATCCTGGGTCGACTCCGTAGAAAGCAAGATGTCTATCTTGT GAAAGCATCATTTGTTTCGACAGAATCTGCTCAATATCAAAGCTAAGCTCAGGGTTGACA GTTGCGAGTTTCATCGACAAAAACTCAACTTGACGTTGTAGTGACTGTACATAATTGATT ATCTCATCAAGCATGACTGCCTTACCAGTGATCTTACTGCAGCCTGGGACAAGATCTTGA AGCAGCTTCATCCTCTCGCTTATCTTTTTTCTCCTCAGTCTTTCTGCAAGGCTGTGGCTA TTAGTGGCTTGGCCTCGCTTTGCCCGGACATGAACATAATCTTCTTTAGTACCATCACCA TCAGAAGAATCTTCCTTGCTTTGCATTTTGGAGCAACTCTTTTGGTTGTCCTCCTCCATT GATATCCTCTCTTGCTGAGATGAAACCTCTGTCTGTTGATCACCAACATTTTGTATCCTG CTACTTGCTGATGGGTTCAACAAGGCAATGTGATCATCTA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)