cluster # 5595

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Oryza sativa
cluster # 5595 cluster # 5595 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5595#0 length = 642 sequences # 3

consensusID : consensus_5595#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 642
fasta sequence

                              [TTGGTACCCCGAGCCCCGACCTGTTTGGTTTTAAGTACAGGACTGATCAGATGAATGGAGTCAGAT-GCTGGGGACAAGAACCCGTTTGCTTTTTCAGCAGC-TTCACCCTTTGGTCTTCCAAGCAGTTCACCATCCACTCCAACTCTGTTTAGTACGCCAGCAACTCAGTTTGCTTCAGCTACATCCGCTTCACCGGGCATGTTCCATTTGGCCAGCATAGTCAATCATCCCCAGGTGGCTTCTCAATAG-GCACTACTGGTGGCAACAGTGAAAAGTCT-GCAAGAAGAATTCTAAAAGTTAAGCGAAAGAAATAAGTCACT-TCGTCCTCTGTCAAGGACAAGGATCATGAGAACTTATTACAGCCTGCATTGCAAATTGCTCTGGTTTTTCAGGGCTGAGGCGATCGGCAAACAGAAATTCACATTTCTTCATTTTATACCAGGAGTGTTTGCCTGAGCTGGCAAAGATGCCCAGTGTTTTCTTTTGGCTGATCCGAATTTTGGCACAT--------GAGGTACCC-ATGGACTGTTTTTTGAACTGAATTTTTGTATGATTTATCCTCTCATGAACCCTTGCGAATTTGTTAAAAAATGAATGTCATCTGTTCTTACAAACAGCGGCCGCGAATTCGCGGCCGCTAGCGGC]

[+] EMBL BI801488             [TTGGTACCCCGAGCCCCGACCTGTTTGGTTTTAAGTACAGGACTGATCAGATGAATGGAGTCAGAT GCTGGGGACAAGAACCCGTTTGCTTTTTCAGCAGC TTCACCCTTTGGTCTTCCAAGCAGTTCACCATCCACTCCAACTCTGTTTAGTACGCCAGCAACTCAGTTTGCTTCAGCTACATCCGCTTCACCGGGCATGTTCCATTTGGCCAGCATAGTCAATCATCCCCAGGTGGCTTCTCAATAG GCACTACTGGTGGCAACAGTGAAAAGTCT GCAAGAAGAATTCTAAAAGTTAAGCGAAAGAAATAAGTCACT TCGTCCTCTGTCAAGGACAAGGATCATGAGAACTTATTACAGCCTGCATTGCAAATTGCTCTGGTTTTTCAGGGCTGAGGCGATCGGCAAACAGAAATTCACATTTCTTCATTTTATACCAGGAGTGTTTGCCTGAGCTGGCAAAGATGCCC GTGTTTTCTTTTGGCTGAaaaaaaaaa                                                                                                                                                       ]
[+] EMBL BQ907382             [                                                        gagGTCAGATGGCTGGGGACAAGAACCCGTTTGCTTTTTCAGCAGCGTTCACCCNTTGGTCTTCCAA CAGTTCACCATCCACTCCAACTCTGTTTAGTACGCCAGCAACTCAGTTTGCTTCAGCTACATCCGCTTCACCGGGCATGTTCCATTT GCCAGCATAGTC ATCATCCCCAGGTGGCTTCTCAATAGNGCACTACTGGTGGCAACAGTGAAAAGTCTGGCAAGAAGAATTCTAAAAGTTAAGCGAAAGAAATAAGTCACTGTTGTCCTCTGTCAAGGACAAGGATCATGAGAACTTATTACAGCCTGC TTGCAAATTGCTCTGGTTTTTCA GGCTGAGGCGATC GCAAACAGAAATTCACATTTCTTCATTTTATACCAGGAGTGTTTGCCTGAGCTGGC AAGATCCCCAGTGTTTTCTTTTGGCTGATCCGAATTTTGGCACAT        GAGGTACCC ATGGACTGTTTTTTGAACTGAATTTTTGTATGATTTATCCTCTCATGAACCCTTGCGAATTTGTTAAAAAA                                                      ]
[-] EMBL AU225488             [                                                                                                                                                                                                                                                                    GGTGGCAACAGTGAAAAGTCT GCAAGAAGAATTCTAAAAGTTAAGCGAAAGAAATAAGTCACT TCGTCCTCTGTCAAGGACAAGGATCATGAGAACTTATTACAGCCTGCATTGCAAATTGCTCTGGTTTTTCAGGGCTGAGGCGATCGGCAAACAGAAATTCACATTTCTTCATTTTATACCAGGAGTGTTTGCCTGAGCTGGCAAAGATG CCAGTGTTTTCTTTTGGCTGATCCGAATTTTGGCACATGAGCTATGGAGGTACCCAATGGACTGTTTTTTGAACTGAATTTTTGTATGATTTATCCTCTCATGAACCATTGCGAATTTGTTAAAATTTGAATGTCATCTGTTCTTACAAACAGCGGCCGCGAATTCGCGGCCGCTAGCGGC]




>consensus_5595#0
TTGGTACCCCGAGCCCCGACCTGTTTGGTTTTAAGTACAGGACTGATCAGATGAATGGAG
TCAGATGCTGGGGACAAGAACCCGTTTGCTTTTTCAGCAGCTTCACCCTTTGGTCTTCCA
AGCAGTTCACCATCCACTCCAACTCTGTTTAGTACGCCAGCAACTCAGTTTGCTTCAGCT
ACATCCGCTTCACCGGGCATGTTCCATTTGGCCAGCATAGTCAATCATCCCCAGGTGGCT
TCTCAATAGGCACTACTGGTGGCAACAGTGAAAAGTCTGCAAGAAGAATTCTAAAAGTTA
AGCGAAAGAAATAAGTCACTTCGTCCTCTGTCAAGGACAAGGATCATGAGAACTTATTAC
AGCCTGCATTGCAAATTGCTCTGGTTTTTCAGGGCTGAGGCGATCGGCAAACAGAAATTC
ACATTTCTTCATTTTATACCAGGAGTGTTTGCCTGAGCTGGCAAAGATGCCCAGTGTTTT
CTTTTGGCTGATCCGAATTTTGGCACATGAGGTACCCATGGACTGTTTTTTGAACTGAAT
TTTTGTATGATTTATCCTCTCATGAACCCTTGCGAATTTGTTAAAAAATGAATGTCATCT
GTTCTTACAAACAGCGGCCGCGAATTCGCGGCCGCTAGCGGC

clustalw multiple alignements is not computed in this case