cluster # 5598

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Oryza sativa
cluster # 5598 cluster # 5598 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5598#0 length = 1061 sequences # 3
consensusID : consensus_5598#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1061
fasta sequence
                              [CAGATCAGGCTCATTCTCATAGTCATTTTGTACTTGCTCATTTTTGTAACTAGAGATAGAAAGTAAGGTATAAGAGCTAGCTAGCGTAATAGTAGTTCATTAGCAGCATCTCCTTGTCGTCCTAGTAGCTCCATTCCTTACTTGTTCTTCTTAGTTTCAACTATACTTCTTCGTTTCCACAAAAAAATCAACCTAGTATTAGAGGTAACATTTCCCAGTACAACGAATCTGAACAGGCTATTCATATTCGTTGTGCTAGGAAATGTCACCTTAATACTAGGCTGGTTTTTTTGGGTCGGAGGGAGGAAGACAGTATAGTTATACTAGGAAATGTCATCTTCAATACTAGGTTGGTTTACGTGGGATGGAGAGAGCAGAGTCCAAACTACCATGGCTAACTAGCAGCTGTGTTGTATCCTCGTCGTCCTCCTCCTAATTCCAATGCTGCATGCGGCCTCGTCTGCATCAACGGTGTACGACGTGTTGGAGAAAAAAGCCCTAATCACCCTAGGCGTGAAGTCTTTCGTGCTTCACCCATGACGGCCACATGGAGGGGTGAGCCTCCCCGGTGAGTGTAACATCGTTGTTACCGTACGTCGCCGGTAAGAAATACAAGATCCATTTCGACAGCGTCGTCTTCATCGGGCTCGTCAAGCCTGATATTGAAGGCGATCTTNCATGTCGATCGACGTACAGCTNCGGCAACAAAGCTCACGG-TCAAGNTCAGTGACAACACTACTGGCTCTTAATTTT-CCGTCAGCAACTTCANCAACAGANCCGNCTGC-ACTGAGCTCGGTGGCTCACGTCC-TGCAGCATGGNCAGANGGGCCCCCGGANGATATATTTACTACGGCATCCAATCCGTGTTTGCGTCATGTACGTGCTAGCTTATACTACTTCCGTCCCATAAAAAGTCAACTTCCAGAGATCAACTTGGATAAGCATTTATCCAGATCGATTCATACCTAGAAGTTATCTTATTTTTGGACGGAGGGTGTATATATATCTGTGTTTATTTTATAGATCCCCTGATGTGTTAAGTAGTAAAAAAAAAAAAAAAAA]

[+] EMBL CB096904             [CAGATCAGGCTCATTCTCATAGTCATTTTGTACTTGCTCATTTTTGTAACTAGAGATAGAAAGTAAGGTATAAGAGCTAGCTAGCGTAATAGTAGTTCATTAGCAGCATCTCCTTGTCGTCCTAGTAGCTCCATTCCTTACTTGTTCTTCTTAGTTTCAACTATACTTCTTCGTTTCCACAAAAAAATCAACCTAGTATTAGAGGTAACATTTCCCAGTACAACGAATCTGAACAGGCTATTCATATTCGTTGTGCTAGGAAATGTCACCTTAATACTAGGCTGGTTTTTTTGGGTCGGAGGGAGGAAGACAGTATAGTTATACTAGGAAATGTCATCTTCAATACTAGGTTGGTTTACGTGGGATGGAGAGAGCAGAGTCCAAACTACCATGGCTAACTAGCAGCTGTGTTGTATCCTCGTCGTCCTCCTCCTAATTCCAATGCTGCATGCGGCCTCGTCTGCATCAACGGTGTACGACGTGTTGGAGAAAAAAGCCCTAATCACCCTAGGCGTGAAGTCTTTCGTGCTTCACCCATGACGGCCACATGGAGGGGTGAGCCTCCCCGGTGAGTGTAACATCGTTGTTACCGTACGTCGCCGGTAAGAAATACAAGATCCATTTCGACAGCGTCGTCTTCATCGGGCTCGTCAAGCCTGATATTGAAGGCGATCTTNCATGTCGATCGACGTACAGCTNCGGCAACAAAGCTCACGGTTCAAGNTCAGNGACAACAC                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CA763929             [  aATCAGGCTCATTCTCATAGTCATTTTGTACTTGCTCATTTTTGTAACTAGAGATAGAAAGTAAGGTATAAGAGCTAGCTAGCGTAATAGTAGTTCATTAGCAGCATCTCCTTGTCGTCCTAGTAGCTCCATTCCTTACTTGTTCTTCTTAGTTTCAACTATACTTCTTCGTTTCCACAAAAAAATCAACCTAGTATTAGAGGTAACATTTCCCAGTACAACGAATCTGAACAGGCTATTCATATTCGTTGTGCTAGGAAATGTCACCTTAATACTAGGCTGGTTTTTTTGGGTCGGAGGGAGGAAGACAGTATAGTTATACTAGGAAATGTCATCTTCAATACTAGGTTGGTTTACGTGGGATGGAGAGAGCAGAGTCCAAACTACCATGGCTAACTAGCAGCTGTGTTGTATCCTCGTCGTCCTCCTCCTAATTCCAATGCTGCATGCGGCCTCGTCTGCATCAACGGTGTACGACGTGTTGGAGAAAAAAGCCCTAATCACCCTAGGCGTGAAGTTTTTCGTGCTTCACCCATGACGGCCACATGGAGGGGTGAGCCTCCCCGGTGAGTGTAACATCGTTGNTACCGTACGTCGCCGGTAAGAAATACAAGATCCATTTCGACAGCGTCGTCTTCATCGGGCTCGTCAAGCCTGATATTGAANGCGATCTTTCATGTCGATCGACGTACAGCTNCGGCAACAAAGCTCACGG TCAAGNTCAGTGACAACACTACTGGCTCTTAATTTT CCGTCAGCAACTTCANCAACAGANCCGNCTGC ACTGAGCTCGGTGGCTCACGTCC TGCAGCATGGNCAGANGGGCCCCCGGANGATATATTT                                                                                                                                                                                                                        ]
[-] EMBL CA761798             [                                                                                                                                                                                                                                                                                                                                                                                            CCAAACTACCATGGCTAACTAGCAGCTGTGTTGTATCCTNGTCGTCCTCCTCCTAATTCCAATGCTGCATGCGGCCTTGTTTGCATCAACGGTGTACGACGTGTTGGAGAAAAAAGCCCTAATCACCCTAGGCGTGAAGTCTTTCGTGCTTCACCCATGACGGCCACATGGAGGGGTGAGCCTCCCTGGTGAGTGTAACATCGTTGTTACCGTACGTCGCCGGTAAGAAATACAAGATCCATTTCGACAGCGTCGTCTTCATCGGGCTCGTCAAGCCTGATATTGAAGGCGATCTTCCATGTCGATCGACGTACAGCTCCGGCAACAAAGCTCACGT TCAAGTTCAGTGACAACACTACTGCCTCTTAATTTTCCCGTCAGCAACTTCACCAACAGACCCGCCTGCAACTGAGCTCGTTGTCTCACGTCCATGCAGCATGGCCAGA TGGCCTCCTGATGATATATTTACTACGGCATCCAATCCGTGTTTGCGTCATGTACGTGCTAGCTTATACTACTTCCGTCCCATAAAAAGTCAACTTCCAGAGATCAACTTGGATAAGCATTTATCCAGATCGATTCATACCTAGAAGTTATCTTATTTTTGGACGGAGGGTGTATATATATCTGTGTTTATTTTATAGATCCCCTGATGTGTTAAGTAGTAAAAAAAAAAAAAAAAA]




>consensus_5598#0
CAGATCAGGCTCATTCTCATAGTCATTTTGTACTTGCTCATTTTTGTAACTAGAGATAGA
AAGTAAGGTATAAGAGCTAGCTAGCGTAATAGTAGTTCATTAGCAGCATCTCCTTGTCGT
CCTAGTAGCTCCATTCCTTACTTGTTCTTCTTAGTTTCAACTATACTTCTTCGTTTCCAC
AAAAAAATCAACCTAGTATTAGAGGTAACATTTCCCAGTACAACGAATCTGAACAGGCTA
TTCATATTCGTTGTGCTAGGAAATGTCACCTTAATACTAGGCTGGTTTTTTTGGGTCGGA
GGGAGGAAGACAGTATAGTTATACTAGGAAATGTCATCTTCAATACTAGGTTGGTTTACG
TGGGATGGAGAGAGCAGAGTCCAAACTACCATGGCTAACTAGCAGCTGTGTTGTATCCTC
GTCGTCCTCCTCCTAATTCCAATGCTGCATGCGGCCTCGTCTGCATCAACGGTGTACGAC
GTGTTGGAGAAAAAAGCCCTAATCACCCTAGGCGTGAAGTCTTTCGTGCTTCACCCATGA
CGGCCACATGGAGGGGTGAGCCTCCCCGGTGAGTGTAACATCGTTGTTACCGTACGTCGC
CGGTAAGAAATACAAGATCCATTTCGACAGCGTCGTCTTCATCGGGCTCGTCAAGCCTGA
TATTGAAGGCGATCTTNCATGTCGATCGACGTACAGCTNCGGCAACAAAGCTCACGGTCA
AGNTCAGTGACAACACTACTGGCTCTTAATTTTCCGTCAGCAACTTCANCAACAGANCCG
NCTGCACTGAGCTCGGTGGCTCACGTCCTGCAGCATGGNCAGANGGGCCCCCGGANGATA
TATTTACTACGGCATCCAATCCGTGTTTGCGTCATGTACGTGCTAGCTTATACTACTTCC
GTCCCATAAAAAGTCAACTTCCAGAGATCAACTTGGATAAGCATTTATCCAGATCGATTC
ATACCTAGAAGTTATCTTATTTTTGGACGGAGGGTGTATATATATCTGTGTTTATTTTAT
AGATCCCCTGATGTGTTAAGTAGTAAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case