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Oryza sativa
cluster # 5602 cluster # 5602       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5602#0 length = 3749 sequences # 2  
 consensus_5602#1 length = 456 sequences # 1  
consensusID : consensus_5602#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3749
fasta sequence 
                              [AGCATCAATTCCATCAAAAGAAATGTTTCGCTTAGCTCTCAATAAACCCATCACACCGATGCTAGTGCTAGCCTTCATTCTTTTCCTGAACTTGCGCCTTCCCTTCTGCTTGTCAGCTCAGTTTCACAACGAATCCAATGCTGATAGGCAGGCTCTCCTCTGCCTCAAGTCCCAGCTCCATGACCCCTCTGGAGCTTTAGGCTCATGGAGAAATGATTCCAGTGTTTCGATGTGTGATTGGCATGGGGTTACATGCAGCACAGGGCTTCCAGCTCGAGTAGATGGATTAGACCTCGAGTCAGAAAACATCACCGGCCAAATATTTCCTTGTGTTGCTAACCTCAGTTTCATCTCCAGAATTCACATGCCTGGTAACCAACTCAATGGCCACATTTCACCTGAGATCGGCCGTTTAACACACCTCAGGTATCTAAATCTCAGCGTGAATGCACTTAGTGGTGAAATACCAGAGACTTTATCGTCATGTTCTCGCCTCGAAACCATCAATCTGTATAGCAACTCCATTGAAGGTAAGATTCCTCCAAGTCTTGCTCATTGTTCATTTCTTCAGCAAATTATTCTTAGCAATAACCATATTCATGGAAGCATACCTTCGGAGATTGGTTTGCTTCCCAACCTTTCTGCACTATTCATTCCTAACAATGAGCTCACTGGCACCATTCCTCCACTTTTGGGAAGTAGCAAAACACTTGTATGGGTGAATCTCCAAAATAATAGCCTTGTTGGGGAAATACCCCCTTCTCTCTTCAACAGCTCTACCATAACTTACATAGATCTCTCACAGAATGGTCTATCCGGGACTATTCCTCCATTCTCAAAAACATCTTTGGTTCTGCGATACCTTTGCTTAACTAATAATTACATCTCTGGCGAGATTCCCAACTCAATTGATAACATTCTCTCCCTGTCTAAGTTGATGCTTTCTGGAAACAACTTAGAAGGGACCATTCCAGAGAGCCTAGGAAAACTCTCTAATTTGCAATTACTAGATCTAAGTTATAATAACTTATCAGGAATTATTTCACCAGGAATATTTAAAATCTCAAATCTTACCTATCTTAATTTTGGTGACAACCGATTTGTTGGGAGAATTCCCACCAACATTGGCTATACCCTTCCAAGACTCACTAGTTTCATACTACATGGGAACCAGTTTGAAGGACCAATTCCTGCTACATTAGCCAATGCTTTGAATCTTACAGAGATTTATTTTGGACGCAACTCCTTCACTGGTATTATTCCTTCATTGGGATCCTTGTCCATGTTGACTGACTTAGATCTAGGTGACAATAAGCTTGAGTCTGGAGATTGGACTTTCATGTCTTCACTAACAAACTGCACCCAACTGCAAAATTTGTGGTTGGGTGGAAATAATCTACAAGGAGTACTTCCCACTTCTATTGGCAACCTATCAAAAGGACTACAGATATTGAATCTAGTACAGAACCAGTTGACTGGCAGCATACCTTCAGAAATAGAAAACCTCACTGGTCTCACTGCCATTCTGATGGGTAATAATATGCTCTCCGGACAAATTCCCAGCACAATTGCAAATCTTCCAAACTTGCTGATCCTAAGCTTATCTCACAACAAGCTTTCTGGAGAAATTCCTCGATCAATAGGCACACTAGAGCAGCTCATTGAACTTTATCTTCAGGAAAATGAATTAACTGGGCAAATACCTTCAAGTTTAGCAAGATGCACAAATTTGGTTGAGCTAAACATTTCAAGAAATAACCTCAATGGAAGCATTCCGTTAGATCTCTTTTCGATTTCTACACTTTCTAAAGGTCTGGACATATCCTATAATCAACTCACTGGGCACATACCACTGGAGATTGGTAGATTGATTAATCTTAATTCTCTTAATATCTCCAACAACCAATTATCTGGTGAGATCCCCTCCAATCTTGGTGAGTGCCTTGTTTTGGAATCAGTTCGCTTGGAGGCAAATTTTCTACAAGGAGGCATCCCGGAATCTCTAATTAACTTAAGAGGCATAATTGAGATTGATTTTTCCCAAAACAACTTGTCTGGTGAAATCCCAAAATATTTTGAGTCTTTTGGATCTTTACGCTCTCTCAATCTATCTTTCAATAACCTTGAGGGACCTGTTCCCAAAGGAGGCGTGTTTGCAAATTCTAGCGATGTGTTCATCCAAGGAAATAAAATGTTATGTGCAAGTTCACCAATGTTACAGTTACCACTTTGCAAGGAACTGTCAGCCAAACGGAAGACATCCTATATTCTTACTGTGGTAGTTCCAGTTAGTACAATTGTTATGATTACCTTGGCATGTGTTGCCATCATGTTTCTGAAGAAGAGATCTGGACCGGAGAGAATCGGCATTAACCATTCGTTCAGGCGTTTGGATAAAATATCATACAGTGATCTGTACAAAGCAACATATGGTTTCTCTTCAACAAGTCTTGTTGGTTCAGGAACATTTGGATTGGTATATAAAGGTCAATTGAAGTTCGGTGCACGCGATGTTGCAATTAAAGTATTTAGACTTGACCAAAATGGAGCACCCAATAGTTTTTCTGCTGAATGTGAGGCACTGAAAAGCATTCGCCATCGGAATCTTGTAAGAGTAATTGGCTTATGTTCAACCTTTGATCCATCAGGAAACGAGTTTAAAGCACTAATTCTTGAGTATAGAGCGAATGGTAACCTCGAAAGCTGGATCCATCCAAAACCATGCAGTCAAAGCCCCCCAAAACTGTTTAGTTTGGCTTCAAGGGTAAGAGTAGCTGGAGACATTGCCACTGCATTGGATTATCTTCATAACCGATGCACTCCTCCTTTGGTTCACTGCGATCTGAAACCAAGCAATGTTCTTTTGGATGACGAAATGGTTGCTTGTATTAGTGATTTTGGACTTGCAAAGTTTCTGCACAACAACTTTATAAGCCTCAATAATTCATCAAGCACTACTGGATTGAGAGGATCAATCGGATACATTGCACCAGGTGAGCACTTGCTTCATTGTTATTTGTATTTTATCTATTGTTTCCACTAGCTCTACCAAGGAAGTGATGCAAAATTGTATCATATTTTGACTGACTAATGAATATTATTAACTTGCACAATATTGATTGTAGAGTATGGCTTGGGATGCAAGGTCTCAGCTGAGGGTGATGTATACAGTTACGGAATTATTGTTCTAGAAATGATAACAGGAAAGCAACCAACTGATGAAATCTTTCAAGATGGAATGGACCTTCACAACTTTGTGGAGTCGGCATTTCCGGATCAAATCAGTGACATTTTAGATCCTACTATCACCGAATATTGTGAAGGTGAAGACCCAAATCATGTTGTGCCTGAAATACTAACATGCGCCATACAAATGGCCAAGCTTGGGCTAATGTGCACAGAGACATCACCAAAAGATCGACCGACAATGGATGATGTTTACTATGATATCATTTCCATCAAAGAAAAATATTATGCACTGATCAACTGAGGAAATGGATGGATACTACTGAAGTTCACCTCCTGAAACTAGTAAAATTGTGTTGGTACTCATCTTTCCAGTTGTTGTAGTGAAGATTCTCTTTATGAATCCAAATAAACTATGATTACGATTTTGTAGTTACACTTGTACACACTACAATTTTAACATGGGGGCAATGCAGCTGTTAAGGTTCTCCCATGCTGTTATGCAGTCTATTCCAAAGGCATTGATCACAAAATTTTGATGGCCCATGCAACAATTGCATAGG]

[+] EMBL AK065195             [AGCATCAATTCCATCAAAAGAAATGTTTCGCTTAGCTCTCAATAAACCCATCACACCGATGCTAGTGCTAGCCTTCATTCTTTTCCTGAACTTGCGCCTTCCCTTCTGCTTGTCAGCTCAGTTTCACAACGAATCCAATGCTGATAGGCAGGCTCTCCTCTGCCTCAAGTCCCAGCTCCATGACCCCTCTGGAGCTTTAGGCTCATGGAGAAATGATTCCAGTGTTTCGATGTGTGATTGGCATGGGGTTACATGCAGCACAGGGCTTCCAGCTCGAGTAGATGGATTAGACCTCGAGTCAGAAAACATCACCGGCCAAATATTTCCTTGTGTTGCTAACCTCAGTTTCATCTCCAGAATTCACATGCCTGGTAACCAACTCAATGGCCACATTTCACCTGAGATCGGCCGTTTAACACACCTCAGGTATCTAAATCTCAGCGTGAATGCACTTAGTGGTGAAATACCAGAGACTTTATCGTCATGTTCTCGCCTCGAAACCATCAATCTGTATAGCAACTCCATTGAAGGTAAGATTCCTCCAAGTCTTGCTCATTGTTCATTTCTTCAGCAAATTATTCTTAGCAATAACCATATTCATGGAAGCATACCTTCGGAGATTGGTTTGCTTCCCAACCTTTCTGCACTATTCATTCCTAACAATGAGCTCACTGGCACCATTCCTCCACTTTTGGGAAGTAGCAAAACACTTGTATGGGTGAATCTCCAAAATAATAGCCTTGTTGGGGAAATACCCCCTTCTCTCTTCAACAGCTCTACCATAACTTACATAGATCTCTCACAGAATGGTCTATCCGGGACTATTCCTCCATTCTCAAAAACATCTTTGGTTCTGCGATACCTTTGCTTAACTAATAATTACATCTCTGGCGAGATTCCCAACTCAATTGATAACATTCTCTCCCTGTCTAAGTTGATGCTTTCTGGAAACAACTTAGAAGGGACCATTCCAGAGAGCCTAGGAAAACTCTCTAATTTGCAATTACTAGATCTAAGTTATAATAACTTATCAGGAATTATTTCACCAGGAATATTTAAAATCTCAAATCTTACCTATCTTAATTTTGGTGACAACCGATTTGTTGGGAGAATTCCCACCAACATTGGCTATACCCTTCCAAGACTCACTAGTTTCATACTACATGGGAACCAGTTTGAAGGACCAATTCCTGCTACATTAGCCAATGCTTTGAATCTTACAGAGATTTATTTTGGACGCAACTCCTTCACTGGTATTATTCCTTCATTGGGATCCTTGTCCATGTTGACTGACTTAGATCTAGGTGACAATAAGCTTGAGTCTGGAGATTGGACTTTCATGTCTTCACTAACAAACTGCACCCAACTGCAAAATTTGTGGTTGGGTGGAAATAATCTACAAGGAGTACTTCCCACTTCTATTGGCAACCTATCAAAAGGACTACAGATATTGAATCTAGTACAGAACCAGTTGACTGGCAGCATACCTTCAGAAATAGAAAACCTCACTGGTCTCACTGCCATTCTGATGGGTAATAATATGCTCTCCGGACAAATTCCCAGCACAATTGCAAATCTTCCAAACTTGCTGATCCTAAGCTTATCTCACAACAAGCTTTCTGGAGAAATTCCTCGATCAATAGGCACACTAGAGCAGCTCATTGAACTTTATCTTCAGGAAAATGAATTAACTGGGCAAATACCTTCAAGTTTAGCAAGATGCACAAATTTGGTTGAGCTAAACATTTCAAGAAATAACCTCAATGGAAGCATTCCGTTAGATCTCTTTTCGATTTCTACACTTTCTAAAGGTCTGGACATATCCTATAATCAACTCACTGGGCACATACCACTGGAGATTGGTAGATTGATTAATCTTAATTCTCTTAATATCTCCAACAACCAATTATCTGGTGAGATCCCCTCCAATCTTGGTGAGTGCCTTGTTTTGGAATCAGTTCGCTTGGAGGCAAATTTTCTACAAGGAGGCATCCCGGAATCTCTAATTAACTTAAGAGGCATAATTGAGATTGATTTTTCCCAAAACAACTTGTCTGGTGAAATCCCAAAATATTTTGAGTCTTTTGGATCTTTACGCTCTCTCAATCTATCTTTCAATAACCTTGAGGGACCTGTTCCCAAAGGAGGCGTGTTTGCAAATTCTAGCGATGTGTTCATCCAAGGAAATAAAATGTTATGTGCAAGTTCACCAATGTTACAGTTACCACTTTGCAAGGAACTGTCAGCCAAACGGAAGACATCCTATATTCTTACTGTGGTAGTTCCAGTTAGTACAATTGTTATGATTACCTTGGCATGTGTTGCCATCATGTTTCTGAAGAAGAGATCTGGACCGGAGAGAATCGGCATTAACCATTCGTTCAGGCGTTTGGATAAAATATCATACAGTGATCTGTACAAAGCAACATATGGTTTCTCTTCAACAAGTCTTGTTGGTTCAGGAACATTTGGATTGGTATATAAAGGTCAATTGAAGTTCGGTGCACGCGATGTTGCAATTAAAGTATTTAGACTTGACCAAAATGGAGCACCCAATAGTTTTTCTGCTGAATGTGAGGCACTGAAAAGCATTCGCCATCGGAATCTTGTAAGAGTAATTGGCTTATGTTCAACCTTTGATCCATCAGGAAACGAGTTTAAAGCACTAATTCTTGAGTATAGAGCGAATGGTAACCTCGAAAGCTGGATCCATCCAAAACCATGCAGTCAAAGCCCCCCAAAACTGTTTAGTTTGGCTTCAAGGGTAAGAGTAGCTGGAGACATTGCCACTGCATTGGATTATCTTCATAACCGATGCACTCCTCCTTTGGTTCACTGCGATCTGAAACCAAGCAATGTTCTTTTGGATGACGAAATGGTTGCTTGTATTAGTGATTTTGGACTTGCAAAGTTTCTGCACAACAACTTTATAAGCCTCAATAATTCATCAAGCACTACTGGATTGAGAGGATCAATCGGATACATTGCACCAGGTGAGCACTTGCTTCATTGTTATTTGTATTTTATCTATTGTTTCCACTAGCTCTACCAAGGAAGTGATGCAAAATTGTATCATATTTTGACTGACTAATGAATATTATTAACTTGCACAATATTGATTGTAGAGTATGGCTTGGGATGCAAGGTCTCAGCTGAGGGTGATGTATACAGTTACGGAATTATTGTTCTAGAAATGATAACAGGAAAGCAACCAACTGATGAAATCTTTCAAGATGGAATGGACCTTCACAACTTTGTGGAGTCGGCATTTCCGGATCAAATCAGTGACATTTTAGATCCTACTATCACCGAATATTGTGAAGGTGAAGACCCAAATCATGTTGTGCCTGAAATACTAACATGCGCCATACAAATGGCCAAGCTTGGGCTAATGTGCACAGAGACATCACCAAAAGATCGACCGACAATGGATGATGTTTACTATGATATCATTTCCATCAAAGAAAAATATTATGCACTGATCAACTGAGGAAATGGATGGATACTACTGAAGTTCACCTCCTGAAACTAGTAAAATTGTGTTGGTACTCATCTTTCCAGTTGTTGTAGTGAAGATTCTCTTTATGAATCCAAATAAACTATGATTACGATTTTGTAGTTACACTTGTACACACTACAATTTTAACATGGGGGCAATGCAGCTGTTAAGGTTCTCCCATGCTGTTATGCAGTCTATTCCAAAGGCATTGATCACAAAATTTTGATGGCCCATGCAACAATTGCATAGG]
[+] EMBL CF307190             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGAGCCTAGGAAAACTCTCTAATTTGCAATTACTAGATCTAAGTTATAATAACTTATCAGGAATTATTTCACCAGGAATATTTAAAATCTCAAATCTTACCTATCTTAATTTTGGTGACAACCGATTTGTTGGGAGAATTCCCACCAACATTGGCTATACCCTTCCAAGACTCACTAGTTTCATACTACATGGGAACCAGTTTGAAGGACCAATTCCTGCTACATTAGCCAATGCTTTGAATCTTACAGAGATTTATTTTGGACGCAACTCCTTCACTGGTATTATTCCTTCATTGGGATCCTTGTCCATGTTGACTGACTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]




>consensus_5602#0
AGCATCAATTCCATCAAAAGAAATGTTTCGCTTAGCTCTCAATAAACCCATCACACCGAT
GCTAGTGCTAGCCTTCATTCTTTTCCTGAACTTGCGCCTTCCCTTCTGCTTGTCAGCTCA
GTTTCACAACGAATCCAATGCTGATAGGCAGGCTCTCCTCTGCCTCAAGTCCCAGCTCCA
TGACCCCTCTGGAGCTTTAGGCTCATGGAGAAATGATTCCAGTGTTTCGATGTGTGATTG
GCATGGGGTTACATGCAGCACAGGGCTTCCAGCTCGAGTAGATGGATTAGACCTCGAGTC
AGAAAACATCACCGGCCAAATATTTCCTTGTGTTGCTAACCTCAGTTTCATCTCCAGAAT
TCACATGCCTGGTAACCAACTCAATGGCCACATTTCACCTGAGATCGGCCGTTTAACACA
CCTCAGGTATCTAAATCTCAGCGTGAATGCACTTAGTGGTGAAATACCAGAGACTTTATC
GTCATGTTCTCGCCTCGAAACCATCAATCTGTATAGCAACTCCATTGAAGGTAAGATTCC
TCCAAGTCTTGCTCATTGTTCATTTCTTCAGCAAATTATTCTTAGCAATAACCATATTCA
TGGAAGCATACCTTCGGAGATTGGTTTGCTTCCCAACCTTTCTGCACTATTCATTCCTAA
CAATGAGCTCACTGGCACCATTCCTCCACTTTTGGGAAGTAGCAAAACACTTGTATGGGT
GAATCTCCAAAATAATAGCCTTGTTGGGGAAATACCCCCTTCTCTCTTCAACAGCTCTAC
CATAACTTACATAGATCTCTCACAGAATGGTCTATCCGGGACTATTCCTCCATTCTCAAA
AACATCTTTGGTTCTGCGATACCTTTGCTTAACTAATAATTACATCTCTGGCGAGATTCC
CAACTCAATTGATAACATTCTCTCCCTGTCTAAGTTGATGCTTTCTGGAAACAACTTAGA
AGGGACCATTCCAGAGAGCCTAGGAAAACTCTCTAATTTGCAATTACTAGATCTAAGTTA
TAATAACTTATCAGGAATTATTTCACCAGGAATATTTAAAATCTCAAATCTTACCTATCT
TAATTTTGGTGACAACCGATTTGTTGGGAGAATTCCCACCAACATTGGCTATACCCTTCC
AAGACTCACTAGTTTCATACTACATGGGAACCAGTTTGAAGGACCAATTCCTGCTACATT
AGCCAATGCTTTGAATCTTACAGAGATTTATTTTGGACGCAACTCCTTCACTGGTATTAT
TCCTTCATTGGGATCCTTGTCCATGTTGACTGACTTAGATCTAGGTGACAATAAGCTTGA
GTCTGGAGATTGGACTTTCATGTCTTCACTAACAAACTGCACCCAACTGCAAAATTTGTG
GTTGGGTGGAAATAATCTACAAGGAGTACTTCCCACTTCTATTGGCAACCTATCAAAAGG
ACTACAGATATTGAATCTAGTACAGAACCAGTTGACTGGCAGCATACCTTCAGAAATAGA
AAACCTCACTGGTCTCACTGCCATTCTGATGGGTAATAATATGCTCTCCGGACAAATTCC
CAGCACAATTGCAAATCTTCCAAACTTGCTGATCCTAAGCTTATCTCACAACAAGCTTTC
TGGAGAAATTCCTCGATCAATAGGCACACTAGAGCAGCTCATTGAACTTTATCTTCAGGA
AAATGAATTAACTGGGCAAATACCTTCAAGTTTAGCAAGATGCACAAATTTGGTTGAGCT
AAACATTTCAAGAAATAACCTCAATGGAAGCATTCCGTTAGATCTCTTTTCGATTTCTAC
ACTTTCTAAAGGTCTGGACATATCCTATAATCAACTCACTGGGCACATACCACTGGAGAT
TGGTAGATTGATTAATCTTAATTCTCTTAATATCTCCAACAACCAATTATCTGGTGAGAT
CCCCTCCAATCTTGGTGAGTGCCTTGTTTTGGAATCAGTTCGCTTGGAGGCAAATTTTCT
ACAAGGAGGCATCCCGGAATCTCTAATTAACTTAAGAGGCATAATTGAGATTGATTTTTC
CCAAAACAACTTGTCTGGTGAAATCCCAAAATATTTTGAGTCTTTTGGATCTTTACGCTC
TCTCAATCTATCTTTCAATAACCTTGAGGGACCTGTTCCCAAAGGAGGCGTGTTTGCAAA
TTCTAGCGATGTGTTCATCCAAGGAAATAAAATGTTATGTGCAAGTTCACCAATGTTACA
GTTACCACTTTGCAAGGAACTGTCAGCCAAACGGAAGACATCCTATATTCTTACTGTGGT
AGTTCCAGTTAGTACAATTGTTATGATTACCTTGGCATGTGTTGCCATCATGTTTCTGAA
GAAGAGATCTGGACCGGAGAGAATCGGCATTAACCATTCGTTCAGGCGTTTGGATAAAAT
ATCATACAGTGATCTGTACAAAGCAACATATGGTTTCTCTTCAACAAGTCTTGTTGGTTC
AGGAACATTTGGATTGGTATATAAAGGTCAATTGAAGTTCGGTGCACGCGATGTTGCAAT
TAAAGTATTTAGACTTGACCAAAATGGAGCACCCAATAGTTTTTCTGCTGAATGTGAGGC
ACTGAAAAGCATTCGCCATCGGAATCTTGTAAGAGTAATTGGCTTATGTTCAACCTTTGA
TCCATCAGGAAACGAGTTTAAAGCACTAATTCTTGAGTATAGAGCGAATGGTAACCTCGA
AAGCTGGATCCATCCAAAACCATGCAGTCAAAGCCCCCCAAAACTGTTTAGTTTGGCTTC
AAGGGTAAGAGTAGCTGGAGACATTGCCACTGCATTGGATTATCTTCATAACCGATGCAC
TCCTCCTTTGGTTCACTGCGATCTGAAACCAAGCAATGTTCTTTTGGATGACGAAATGGT
TGCTTGTATTAGTGATTTTGGACTTGCAAAGTTTCTGCACAACAACTTTATAAGCCTCAA
TAATTCATCAAGCACTACTGGATTGAGAGGATCAATCGGATACATTGCACCAGGTGAGCA
CTTGCTTCATTGTTATTTGTATTTTATCTATTGTTTCCACTAGCTCTACCAAGGAAGTGA
TGCAAAATTGTATCATATTTTGACTGACTAATGAATATTATTAACTTGCACAATATTGAT
TGTAGAGTATGGCTTGGGATGCAAGGTCTCAGCTGAGGGTGATGTATACAGTTACGGAAT
TATTGTTCTAGAAATGATAACAGGAAAGCAACCAACTGATGAAATCTTTCAAGATGGAAT
GGACCTTCACAACTTTGTGGAGTCGGCATTTCCGGATCAAATCAGTGACATTTTAGATCC
TACTATCACCGAATATTGTGAAGGTGAAGACCCAAATCATGTTGTGCCTGAAATACTAAC
ATGCGCCATACAAATGGCCAAGCTTGGGCTAATGTGCACAGAGACATCACCAAAAGATCG
ACCGACAATGGATGATGTTTACTATGATATCATTTCCATCAAAGAAAAATATTATGCACT
GATCAACTGAGGAAATGGATGGATACTACTGAAGTTCACCTCCTGAAACTAGTAAAATTG
TGTTGGTACTCATCTTTCCAGTTGTTGTAGTGAAGATTCTCTTTATGAATCCAAATAAAC
TATGATTACGATTTTGTAGTTACACTTGTACACACTACAATTTTAACATGGGGGCAATGC
AGCTGTTAAGGTTCTCCCATGCTGTTATGCAGTCTATTCCAAAGGCATTGATCACAAAAT
TTTGATGGCCCATGCAACAATTGCATAGG

consensusID : consensus_5602#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 456
fasta sequence 
                              [GAAATGATCACAGGAAAGCGCCCAACTGATCAAATGTTTCAGGATGGAGTGGACCTTCGCAGCTTTGTGGAGTCGGCATTTCCAGATCAAATCAGTGACATTTTAGAACCTACTATCGCCGAATATCTCGAAGGTGAAGACCCAAATCATGTTGTGCCTGAAATACTAACATGTGCCATACANCTGGNTAAGCTTGGGCTAATGTGCACAGAGACATCNCCAAAAGATCGNCCAACAATGGATGATGTTTACTATCAGATCATTTCCATCAAAGAAAAATATCATGCCCTGATCAACTGAGGAAAAAAGATGGATATATACCTACTGAAGTTCACCTGTTGAAGATAGTAAAATAGTGTTGGTACTCATCTGTCCATTTGTAGTAGTCAAGATTATCTCTTTGTGAACCCAAATAAAATTATAATTNCGATTTTGTAGTTACACTTGTAAAAAAAA]

[+] EMBL AU174976             [GAAATGATCACAGGAAAGCGCCCAACTGATCAAATGTTTCAGGATGGAGTGGACCTTCGCAGCTTTGTGGAGTCGGCATTTCCAGATCAAATCAGTGACATTTTAGAACCTACTATCGCCGAATATCTCGAAGGTGAAGACCCAAATCATGTTGTGCCTGAAATACTAACATGTGCCATACANCTGGNTAAGCTTGGGCTAATGTGCACAGAGACATCNCCAAAAGATCGNCCAACAATGGATGATGTTTACTATCAGATCATTTCCATCAAAGAAAAATATCATGCCCTGATCAACTGAGGAAAAAAGATGGATATATACCTACTGAAGTTCACCTGTTGAAGATAGTAAAATAGTGTTGGTACTCATCTGTCCATTTGTAGTAGTCAAGATTATCTCTTTGTGAACCCAAATAAAATTATAATTNCGATTTTGTAGTTACACTTGTAAAAAAAA]




>consensus_5602#1
GAAATGATCACAGGAAAGCGCCCAACTGATCAAATGTTTCAGGATGGAGTGGACCTTCGC
AGCTTTGTGGAGTCGGCATTTCCAGATCAAATCAGTGACATTTTAGAACCTACTATCGCC
GAATATCTCGAAGGTGAAGACCCAAATCATGTTGTGCCTGAAATACTAACATGTGCCATA
CANCTGGNTAAGCTTGGGCTAATGTGCACAGAGACATCNCCAAAAGATCGNCCAACAATG
GATGATGTTTACTATCAGATCATTTCCATCAAAGAAAAATATCATGCCCTGATCAACTGA
GGAAAAAAGATGGATATATACCTACTGAAGTTCACCTGTTGAAGATAGTAAAATAGTGTT
GGTACTCATCTGTCCATTTGTAGTAGTCAAGATTATCTCTTTGTGAACCCAAATAAAATT
ATAATTNCGATTTTGTAGTTACACTTGTAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5602#0      AGCATCAATTCCATCAAAAGAAATGTTTCGCTTAGCTCTCAATAAACCCATCACACCGAT 60
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      GCTAGTGCTAGCCTTCATTCTTTTCCTGAACTTGCGCCTTCCCTTCTGCTTGTCAGCTCA 120
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      GTTTCACAACGAATCCAATGCTGATAGGCAGGCTCTCCTCTGCCTCAAGTCCCAGCTCCA 180
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      TGACCCCTCTGGAGCTTTAGGCTCATGGAGAAATGATTCCAGTGTTTCGATGTGTGATTG 240
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      GCATGGGGTTACATGCAGCACAGGGCTTCCAGCTCGAGTAGATGGATTAGACCTCGAGTC 300
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      AGAAAACATCACCGGCCAAATATTTCCTTGTGTTGCTAACCTCAGTTTCATCTCCAGAAT 360
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      TCACATGCCTGGTAACCAACTCAATGGCCACATTTCACCTGAGATCGGCCGTTTAACACA 420
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      CCTCAGGTATCTAAATCTCAGCGTGAATGCACTTAGTGGTGAAATACCAGAGACTTTATC 480
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      GTCATGTTCTCGCCTCGAAACCATCAATCTGTATAGCAACTCCATTGAAGGTAAGATTCC 540
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      TCCAAGTCTTGCTCATTGTTCATTTCTTCAGCAAATTATTCTTAGCAATAACCATATTCA 600
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      TGGAAGCATACCTTCGGAGATTGGTTTGCTTCCCAACCTTTCTGCACTATTCATTCCTAA 660
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      CAATGAGCTCACTGGCACCATTCCTCCACTTTTGGGAAGTAGCAAAACACTTGTATGGGT 720
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      GAATCTCCAAAATAATAGCCTTGTTGGGGAAATACCCCCTTCTCTCTTCAACAGCTCTAC 780
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      CATAACTTACATAGATCTCTCACAGAATGGTCTATCCGGGACTATTCCTCCATTCTCAAA 840
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      AACATCTTTGGTTCTGCGATACCTTTGCTTAACTAATAATTACATCTCTGGCGAGATTCC 900
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      CAACTCAATTGATAACATTCTCTCCCTGTCTAAGTTGATGCTTTCTGGAAACAACTTAGA 960
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      AGGGACCATTCCAGAGAGCCTAGGAAAACTCTCTAATTTGCAATTACTAGATCTAAGTTA 1020
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      TAATAACTTATCAGGAATTATTTCACCAGGAATATTTAAAATCTCAAATCTTACCTATCT 1080
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      TAATTTTGGTGACAACCGATTTGTTGGGAGAATTCCCACCAACATTGGCTATACCCTTCC 1140
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      AAGACTCACTAGTTTCATACTACATGGGAACCAGTTTGAAGGACCAATTCCTGCTACATT 1200
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      AGCCAATGCTTTGAATCTTACAGAGATTTATTTTGGACGCAACTCCTTCACTGGTATTAT 1260
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      TCCTTCATTGGGATCCTTGTCCATGTTGACTGACTTAGATCTAGGTGACAATAAGCTTGA 1320
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      GTCTGGAGATTGGACTTTCATGTCTTCACTAACAAACTGCACCCAACTGCAAAATTTGTG 1380
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      GTTGGGTGGAAATAATCTACAAGGAGTACTTCCCACTTCTATTGGCAACCTATCAAAAGG 1440
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      ACTACAGATATTGAATCTAGTACAGAACCAGTTGACTGGCAGCATACCTTCAGAAATAGA 1500
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      AAACCTCACTGGTCTCACTGCCATTCTGATGGGTAATAATATGCTCTCCGGACAAATTCC 1560
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      CAGCACAATTGCAAATCTTCCAAACTTGCTGATCCTAAGCTTATCTCACAACAAGCTTTC 1620
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      TGGAGAAATTCCTCGATCAATAGGCACACTAGAGCAGCTCATTGAACTTTATCTTCAGGA 1680
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      AAATGAATTAACTGGGCAAATACCTTCAAGTTTAGCAAGATGCACAAATTTGGTTGAGCT 1740
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      AAACATTTCAAGAAATAACCTCAATGGAAGCATTCCGTTAGATCTCTTTTCGATTTCTAC 1800
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      ACTTTCTAAAGGTCTGGACATATCCTATAATCAACTCACTGGGCACATACCACTGGAGAT 1860
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      TGGTAGATTGATTAATCTTAATTCTCTTAATATCTCCAACAACCAATTATCTGGTGAGAT 1920
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      CCCCTCCAATCTTGGTGAGTGCCTTGTTTTGGAATCAGTTCGCTTGGAGGCAAATTTTCT 1980
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      ACAAGGAGGCATCCCGGAATCTCTAATTAACTTAAGAGGCATAATTGAGATTGATTTTTC 2040
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      CCAAAACAACTTGTCTGGTGAAATCCCAAAATATTTTGAGTCTTTTGGATCTTTACGCTC 2100
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      TCTCAATCTATCTTTCAATAACCTTGAGGGACCTGTTCCCAAAGGAGGCGTGTTTGCAAA 2160
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      TTCTAGCGATGTGTTCATCCAAGGAAATAAAATGTTATGTGCAAGTTCACCAATGTTACA 2220
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      GTTACCACTTTGCAAGGAACTGTCAGCCAAACGGAAGACATCCTATATTCTTACTGTGGT 2280
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      AGTTCCAGTTAGTACAATTGTTATGATTACCTTGGCATGTGTTGCCATCATGTTTCTGAA 2340
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      GAAGAGATCTGGACCGGAGAGAATCGGCATTAACCATTCGTTCAGGCGTTTGGATAAAAT 2400
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      ATCATACAGTGATCTGTACAAAGCAACATATGGTTTCTCTTCAACAAGTCTTGTTGGTTC 2460
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      AGGAACATTTGGATTGGTATATAAAGGTCAATTGAAGTTCGGTGCACGCGATGTTGCAAT 2520
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      TAAAGTATTTAGACTTGACCAAAATGGAGCACCCAATAGTTTTTCTGCTGAATGTGAGGC 2580
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      ACTGAAAAGCATTCGCCATCGGAATCTTGTAAGAGTAATTGGCTTATGTTCAACCTTTGA 2640
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      TCCATCAGGAAACGAGTTTAAAGCACTAATTCTTGAGTATAGAGCGAATGGTAACCTCGA 2700
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      AAGCTGGATCCATCCAAAACCATGCAGTCAAAGCCCCCCAAAACTGTTTAGTTTGGCTTC 2760
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      AAGGGTAAGAGTAGCTGGAGACATTGCCACTGCATTGGATTATCTTCATAACCGATGCAC 2820
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      TCCTCCTTTGGTTCACTGCGATCTGAAACCAAGCAATGTTCTTTTGGATGACGAAATGGT 2880
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      TGCTTGTATTAGTGATTTTGGACTTGCAAAGTTTCTGCACAACAACTTTATAAGCCTCAA 2940
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      TAATTCATCAAGCACTACTGGATTGAGAGGATCAATCGGATACATTGCACCAGGTGAGCA 3000
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      CTTGCTTCATTGTTATTTGTATTTTATCTATTGTTTCCACTAGCTCTACCAAGGAAGTGA 3060
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      TGCAAAATTGTATCATATTTTGACTGACTAATGAATATTATTAACTTGCACAATATTGAT 3120
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      TGTAGAGTATGGCTTGGGATGCAAGGTCTCAGCTGAGGGTGATGTATACAGTTACGGAAT 3180
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      TATTGTTCTAGAAATGATAACAGGAAAGCAACCAACTGATGAAATCTTTCAAGATGGAAT 3240
consensus_5602#1      ----------GAAATGATCACAGGAAAGCGCCCAACTGATCAAATGTTTCAGGATGGAGT 50
                                ******** **********  ********* **** ***** ****** *

consensus_5602#0      GGACCTTCACAACTTTGTGGAGTCGGCATTTCCGGATCAAATCAGTGACATTTTAGATCC 3300
consensus_5602#1      GGACCTTCGCAGCTTTGTGGAGTCGGCATTTCCAGATCAAATCAGTGACATTTTAGAACC 110
                      ******** ** ********************* *********************** **

consensus_5602#0      TACTATCACCGAATATTGTGAAGGTGAAGACCCAAATCATGTTGTGCCTGAAATACTAAC 3360
consensus_5602#1      TACTATCGCCGAATATCTCGAAGGTGAAGACCCAAATCATGTTGTGCCTGAAATACTAAC 170
                      ******* ********   *****************************************

consensus_5602#0      ATGCGCCATACAAATGGCCAAGCTTGGGCTAATGTGCACAGAGACATCACCAAAAGATCG 3420
consensus_5602#1      ATGTGCCATACANCTGGNTAAGCTTGGGCTAATGTGCACAGAGACATCNCCAAAAGATCG 230
                      *** ********  ***  ***************************** ***********

consensus_5602#0      ACCGACAATGGATGATGTTTACTATGATATCATTTCCATCAAAGAAAAATATTATGCACT 3480
consensus_5602#1      NCCAACAATGGATGATGTTTACTATCAGATCATTTCCATCAAAGAAAAATATCATGCCCT 290
                       ** ********************* * ************************ **** **

consensus_5602#0      GATCAACTGAGGAAATG-GATGGATA-----CTACTGAAGTTCACCTCCTGAAACTAGTA 3534
consensus_5602#1      GATCAACTGAGGAAAAAAGATGGATATATACCTACTGAAGTTCACCTGTTGAAGATAGTA 350
                      ***************   ********     ****************  ****  *****

consensus_5602#0      AAATTGTGTTGGTACTCATCTTTCCAGTTGTTGTAGTGAAGATT--CTCTTTATGAATCC 3592
consensus_5602#1      AAATAGTGTTGGTACTCATCTGTCCATTTGTAGTAGTCAAGATTATCTCTTTGTGAACCC 410
                      **** **************** **** **** ***** ******  ****** **** **

consensus_5602#0      AAATAAA-CTATGATTACGATTTTGTAGTTACACTTGTACACACTACAATTTTAACATGG 3651
consensus_5602#1      AAATAAAATTATAATTNCGATTTTGTAGTTACACTTGTAAAAAAAA-------------- 456
                      *******  *** *** ********************** * *  *              

consensus_5602#0      GGGCAATGCAGCTGTTAAGGTTCTCCCATGCTGTTATGCAGTCTATTCCAAAGGCATTGA 3711
consensus_5602#1      ------------------------------------------------------------
                                                                                  

consensus_5602#0      TCACAAAATTTTGATGGCCCATGCAACAATTGCATAGG 3749
consensus_5602#1      --------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)