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Oryza sativa
cluster # 5604 cluster # 5604       Sequences # 3       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5604#0 length = 1863 sequences # 2  
consensus_5604#1 length = 1670 sequences # 1  

consensusID : consensus_5604#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1863
fasta sequence
                              [AAAGAAAAAAAAAATCGCAGCTAGGCCTCTCCCGAATCTTCTGGAACCTTCTCGAACCAGGAGGCGGAGGAGGAGCTGCTGCTGCCGCGGCTGCCAATGCCGGTGGCGGGGATCAGGAGGAGGAGGAGGAGGAGGGGGCGGTGGATGTAGGGTGGGGGAGCGATGGCGAGGTCGAGGCCTAGGGTTTGGCTCCTGGCGGGGTGCAGCGCCGTGCTGCTGTGGGCCTTCGTCGGGCAGCTCGTGGCCGTCGGACGCCTCCTCGCCTTGTTCGGCCTCGCCGGCGACGCGGAGCCCTCGCCTCCGCCCACCGCGCTTCCGCCTCGAAGAGTCTATAAGAGTAATGGTTATCTGAAGGTATCTTGCAATGGGGGTTTGAATCAGATGCGTTCAGAGATATGTGACATGGTGGCGGTTGCTCGCTTGCTAAACCTTACAATGGTTGTCCCAGAACTAGACAAGAGGTCATTCTGGGCTGATCAAAGCAATTTTGAAGATATATTTGATGTTAAACATTTCATTGACACATTAAGAGATGAAGTGCACATTGTTAAACAGCTTCCGAAGAGGTTTGGTCCAGAGGATTCAAACAATATACTTAATATGCCACCTGTGAGCTGGTCTGATGAAAAATATTACTTGCATCAGATCTTACCATTATTCAGCAAATATAGCGTCATCCATTTTAACAAGACGGATGCTCGGTTAGCAAACAATGGTATCAGTACACAGCTTCAACTACTTAGGTGCCGTGTTAATTTTCATGCACTGAAGTTCACCCCTCAAATTGAGGCCTTGGGGAATAAACTGGTGCAGAAACTTCAGGCCAAGGGATCATTTGCAGCCTTGCATTTACGCTATGAGATGGACATGCTGGCCTTTTCTGGTTGCAATCATGGTCTTTCTCAAGAAGAAGCTGAAGAGCTCAAAAGAATGAGATATGCTTATCCATGGTGGAGAGAAAAGGAAATTGATCCACAAGCTAAGAGATTGCAAGGGCTATGCCCACTTACACCTGAGGAGACATCTTTTATTCTGAAAGCTCTGGGATTTCAGAAGGACACTCTCATATACATTGCTGCCGGTGAAATTTATGGGGGAGAAAAAAGATTAGAACCATTACAAGCTGCATTTCCAAAACTTGTAAGAAAGGAGACGCTGCTAGACTTGGAAGCTCTACGACAATTCCAGAACCATTCTTCTCAGATGGCTGCACTTGACTTCATTGTATCCACAGCCAGTGATATTTTCATTCCTACTTATGATGGTAACATGGCAAAACCTGTTGAAGGTCACCGGAGGTTCCTGGGTTTCAGGAGAAGTGTGCTACTAGACCGACAGAAATTGGTTGGATTTATAGATCTGTACAACAATAAGACAATCTCTTGGAACAATTTTGCATCTTCTGTCCAGGAAACTCATAGAAATCGTGTAGTTCAACCGTCCTGTCGGCAGAAACTTGAAAATAAGCCAAAAGAAGAGGATTACTTTTATGCTAACCCACACGAATGCCTGGCCAATTCAAGATTTTGCAGCCGAACCAAGGATGCAATCAGTGTAAGGTGAGCGTCAAGTCAAGTTGTAACCTCACCGAGCCAAGTTATTATGGCGACGTGCAGTGGACTGAACCCAGCAGCACAGCAGGCAGAGTCCATCTTGATCGTTTAACCGGTTTTCCTGATCTCCTGTTGTATAGGTCAGCCTTTTCGCTTTGCGATTGATTGATTCATTTTTCACTTGCCGAATGCAGAATATGAATGCCCTTCTAAAGCATGTAAATTGGGCTGGTTGTTTACTGTTCGTGTTCATGACAATCAATTAATTCATGATGATAGCCAAAGCAAAATACATGCTTTTCTATGAAAA]

[+] EMBL AK107189             [AAAGAAAAAAAAAATCGCAGCTAGGCCTCTCCCGAATCTTCTGGAACCTTCTCGAACCAGGAGGCGGAGGAGGAGCTGCTGCTGCCGCGGCTGCCAATGCCGGTGGCGGGGATCAGGAGGAGGAGGAGGAGGAGGGGGCGGTGGATGTAGGGTGGGGGAGCGATGGCGAGGTCGAGGCCTAGGGTTTGGCTCCTGGCGGGGTGCAGCGCCGTGCTGCTGTGGGCCTTCGTCGGGCAGCTCGTGGCCGTCGGACGCCTCCTCGCCTTGTTCGGCCTCGCCGGCGACGCGGAGCCCTCGCCTCCGCCCACCGCGCTTCCGCCTCGAAGAGTCTATAAGAGTAATGGTTATCTGAAGGTATCTTGCAATGGGGGTTTGAATCAGATGCGTTCAGAGATATGTGACATGGTGGCGGTTGCTCGCTTGCTAAACCTTACAATGGTTGTCCCAGAACTAGACAAGAGGTCATTCTGGGCTGATCAAAGCAATTTTGAAGATATATTTGATGTTAAACATTTCATTGACACATTAAGAGATGAAGTGCACATTGTTAAACAGCTTCCGAAGAGGTTTGGTCCAGAGGATTCAAACAATATACTTAATATGCCACCTGTGAGCTGGTCTGATGAAAAATATTACTTGCATCAGATCTTACCATTATTCAGCAAATATAGCGTCATCCATTTTAACAAGACGGATGCTCGGTTAGCAAACAATGGTATCAGTACACAGCTTCAACTACTTAGGTGCCGTGTTAATTTTCATGCACTGAAGTTCACCCCTCAAATTGAGGCCTTGGGGAATAAACTGGTGCAGAAACTTCAGGCCAAGGGATCATTTGCAGCCTTGCATTTACGCTATGAGATGGACATGCTGGCCTTTTCTGGTTGCAATCATGGTCTTTCTCAAGAAGAAGCTGAAGAGCTCAAAAGAATGAGATATGCTTATCCATGGTGGAGAGAAAAGGAAATTGATCCACAAGCTAAGAGATTGCAAGGGCTATGCCCACTTACACCTGAGGAGACATCTTTTATTCTGAAAGCTCTGGGATTTCAGAAGGACACTCTCATATACATTGCTGCCGGTGAAATTTATGGGGGAGAAAAAAGATTAGAACCATTACAAGCTGCATTTCCAAAACTTGTAAGAAAGGAGACGCTGCTAGACTTGGAAGCTCTACGACAATTCCAGAACCATTCTTCTCAGATGGCTGCACTTGACTTCATTGTATCCACAGCCAGTGATATTTTCATTCCTACTTATGATGGTAACATGGCAAAACCTGTTGAAGGTCACCGGAGGTTCCTGGGTTTCAGGAGAAGTGTGCTACTAGACCGACAGAAATTGGTTGGATTTATAGATCTGTACAACAATAAGACAATCTCTTGGAACAATTTTGCATCTTCTGTCCAGGAAACTCATAGAAATCGTGTAGTTCAACCGTCCTGTCGGCAGAAACTTGAAAATAAGCCAAAAGAAGAGGATTACTTTTATGCTAACCCACACGAATGCCTGGCCAATTCAAGATTTTGCAGCCGAACCAAGGATGCAATCAGTGTAAGGTGAGCGTCAAGTCAAGTTGTAACCTCACCGAGCCAAGTTATTATGGCGACGTGCAGTGGACTGAACCCAGCAGCACAGCAGGCAGAGTCCATCTTGATCGTTTAACCGGTTTTCCTGATCTCCTGTTGTATAGGTCAGCCTTTTCGCTTTGCGATTGATTGATTCATTTTTCACTTGCCGAATGCAGAATATGAATGCCCTTCTAAAGCATGTAAATTGGGCTGGTTGTTTACTGTTCGTGTTCATGACAATCAATTAATTCATGATGATAGCCAAAGCAAAATACATGCTTTTCTATGAAAA]
[+] EMBL CA753200             [                                                                                                                                                                                              TCCTGGCGGGGTGCGGCGCCGTGCTGCTGTGGGCCTTCGTCGGGCAGCTCGTGGCCGTCGGACGCCTCCTCGCCTTGTTCGGCCTCGCCGGCGACGCGGAGCCCTCGCCTCCGCCCACCGCGCTTCCGCCTCGAAGAGTCTATAAGAGTAATGGTTATCTGAAGGTATCTTGCAATGGGGGTTTGAATCAGATGCGTTCAGAGATATGTGACATGGTGGCGGTTGCTCGCTTGCTAAACCTTACAATGGTTGTCCCAGAACTAGACAAGAGGTCATTCTGGGCTGATCAAAGCAATTTTGAAGATATATTTGATGTTAAACATTTCATTGACACATTAAGAGATGAAGTGCACATAGTTAAACAGCTTCCGAAGAGGTTTGGTCCAGAGGATTCCAACAATATACTTAATATGCCACCTGTGAACTGGTCTGATTAAAAATATTACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]


>consensus_5604#0 AAAGAAAAAAAAAATCGCAGCTAGGCCTCTCCCGAATCTTCTGGAACCTTCTCGAACCAG GAGGCGGAGGAGGAGCTGCTGCTGCCGCGGCTGCCAATGCCGGTGGCGGGGATCAGGAGG AGGAGGAGGAGGAGGGGGCGGTGGATGTAGGGTGGGGGAGCGATGGCGAGGTCGAGGCCT AGGGTTTGGCTCCTGGCGGGGTGCAGCGCCGTGCTGCTGTGGGCCTTCGTCGGGCAGCTC GTGGCCGTCGGACGCCTCCTCGCCTTGTTCGGCCTCGCCGGCGACGCGGAGCCCTCGCCT CCGCCCACCGCGCTTCCGCCTCGAAGAGTCTATAAGAGTAATGGTTATCTGAAGGTATCT TGCAATGGGGGTTTGAATCAGATGCGTTCAGAGATATGTGACATGGTGGCGGTTGCTCGC TTGCTAAACCTTACAATGGTTGTCCCAGAACTAGACAAGAGGTCATTCTGGGCTGATCAA AGCAATTTTGAAGATATATTTGATGTTAAACATTTCATTGACACATTAAGAGATGAAGTG CACATTGTTAAACAGCTTCCGAAGAGGTTTGGTCCAGAGGATTCAAACAATATACTTAAT ATGCCACCTGTGAGCTGGTCTGATGAAAAATATTACTTGCATCAGATCTTACCATTATTC AGCAAATATAGCGTCATCCATTTTAACAAGACGGATGCTCGGTTAGCAAACAATGGTATC AGTACACAGCTTCAACTACTTAGGTGCCGTGTTAATTTTCATGCACTGAAGTTCACCCCT CAAATTGAGGCCTTGGGGAATAAACTGGTGCAGAAACTTCAGGCCAAGGGATCATTTGCA GCCTTGCATTTACGCTATGAGATGGACATGCTGGCCTTTTCTGGTTGCAATCATGGTCTT TCTCAAGAAGAAGCTGAAGAGCTCAAAAGAATGAGATATGCTTATCCATGGTGGAGAGAA AAGGAAATTGATCCACAAGCTAAGAGATTGCAAGGGCTATGCCCACTTACACCTGAGGAG ACATCTTTTATTCTGAAAGCTCTGGGATTTCAGAAGGACACTCTCATATACATTGCTGCC GGTGAAATTTATGGGGGAGAAAAAAGATTAGAACCATTACAAGCTGCATTTCCAAAACTT GTAAGAAAGGAGACGCTGCTAGACTTGGAAGCTCTACGACAATTCCAGAACCATTCTTCT CAGATGGCTGCACTTGACTTCATTGTATCCACAGCCAGTGATATTTTCATTCCTACTTAT GATGGTAACATGGCAAAACCTGTTGAAGGTCACCGGAGGTTCCTGGGTTTCAGGAGAAGT GTGCTACTAGACCGACAGAAATTGGTTGGATTTATAGATCTGTACAACAATAAGACAATC TCTTGGAACAATTTTGCATCTTCTGTCCAGGAAACTCATAGAAATCGTGTAGTTCAACCG TCCTGTCGGCAGAAACTTGAAAATAAGCCAAAAGAAGAGGATTACTTTTATGCTAACCCA CACGAATGCCTGGCCAATTCAAGATTTTGCAGCCGAACCAAGGATGCAATCAGTGTAAGG TGAGCGTCAAGTCAAGTTGTAACCTCACCGAGCCAAGTTATTATGGCGACGTGCAGTGGA CTGAACCCAGCAGCACAGCAGGCAGAGTCCATCTTGATCGTTTAACCGGTTTTCCTGATC TCCTGTTGTATAGGTCAGCCTTTTCGCTTTGCGATTGATTGATTCATTTTTCACTTGCCG AATGCAGAATATGAATGCCCTTCTAAAGCATGTAAATTGGGCTGGTTGTTTACTGTTCGT GTTCATGACAATCAATTAATTCATGATGATAGCCAAAGCAAAATACATGCTTTTCTATGA AAA



consensusID : consensus_5604#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1670
fasta sequence
                              [TTAGAACCATTACAAGCTGCATTTCCAAAACTTGTAAGAAAGGAGACGCTGCTAGACTTGGAAGCTCTACGACAATTCCAGAACCATTCTTCTCAGATGGCTGCACTTGACTTCATTGTATCCACAGCCAGTGATATTTTCATTCCTACTTATGATGGTAACATGGCAAAACTTGTTGAAGGTCACCGGAGGTTCCTGGGTTTCAGGAGAAGTGTGCTACTAGACCGACAGAAATTGGTTGGATTTATAGATCTGTACAACAATAAGACAATCTCTTGGAACAATTTTGCATCTTCTGTCCAGGAAACTCATAGAAATCGTGTAGTTCAACCGTCCTGTCGGCAGAAACTTGAAAATAAGCCAAAAGAAGAGGATTACTTTTATGCTAACCCACACGAATGCCTGGCCAATTCAAGATTTTGCAGCCGAACCAAGGATGCAATCAGTGTAAGGTGAGCGTCAAGTCAAGTTGTAACCTCACCGAGCCAAGTTATTATGGCGACGTGCAGTGGACTGAAGCCAGCAGCACAGCAGGCAGAGTCCATCTTGATCGTTTAACCGGTTTTCCTGATCTCCTGTTGTATAGACCTGCTCGCCAAGCTTGGAAAAGTTTGCAGAAAGAATGGAAGGGGACACGATGATGTCATTCTTCGAGAACTTGTCAACCCTGGATGATGCCCTCACTCGGAATGCTTTCCTGCAAAGCATCAAGGGAAAAACAGAATGAGAACCTTAAGATCACAGCACTTAACCAAGATAGCATCATAGCAACAGTAAAGGTTCTAAGAAATGCCGTCCTGATGAACTCCTCAAGTCAACTGGTGCAGCTTGAGAGCAGTTGGGAGAAATAGCATCAATACTAGCTCGTTCAACCTGCGCCGGCAGCTCAAAGCTCATGAACCCATCCAGTCCCAGAAGCGCGAGAGCTCGCAAAGATCGGGTCGGCCGCGGCGCATACCAGCGAAGAAGGGGGCGCAATCTCGGAAGCGAACGGTGGGGGTAACTACCTGGGCGAGGAGAAGGCGAGGCGGCGGCCGAGGGAGGCGGCGCGCGGCGAGGCGAAGGTCGAGCACAGCGACGACGACGACGACGGCGACGCCATCTCTCTCTCTCTCTTTCTCTCTCCACCAACTCCCTCTCGAGGAGCAGCGAGAGCTTTTGATTTGGTGAAGCGGTGGCGGCTAGGAGGCGTCGCGTAGGAGGAGAGGAGAGGAGAGGGAAATCTGGCTCCGCTTCGCCTCGTTATCTGCTCGCTGCTGCACCCAAGCCGCAGCCGGTCCACATAAATCGCAGCGTGGGGGCCAGCGAATTTCGTCGCGTTTTTGGGTTGGGGAGGAGTTTTTGGTTGGTTAGTTGGTGGCGGCTCTGAGGCGAGCCAGCCAAGGCCAAGCCAACGACCGCGGTTTCGTCCTCTACCAAACCCGCACCACCACTGCGCGCGTGTGGTTGCAGCATTTTTGCACCTGCACCGCACCGGAAACGGCACGAAAATGAAAGAGCATCCGCATCTCGAACTGGCATCTCTCTTCCAGTCTTCCTCGCCCACCTTCCGTGCGGCAGTGGCGAAACTATACTATGTGCCAGATTCCTAATTTCGGACTTAAAAATACTAGAATGTGCAGTTATGTGCTGAAATTTTCTAGATTCTCAATGGTAGTGCACCCCTCTTA]

[+] EMBL AK064675             [TTAGAACCATTACAAGCTGCATTTCCAAAACTTGTAAGAAAGGAGACGCTGCTAGACTTGGAAGCTCTACGACAATTCCAGAACCATTCTTCTCAGATGGCTGCACTTGACTTCATTGTATCCACAGCCAGTGATATTTTCATTCCTACTTATGATGGTAACATGGCAAAACTTGTTGAAGGTCACCGGAGGTTCCTGGGTTTCAGGAGAAGTGTGCTACTAGACCGACAGAAATTGGTTGGATTTATAGATCTGTACAACAATAAGACAATCTCTTGGAACAATTTTGCATCTTCTGTCCAGGAAACTCATAGAAATCGTGTAGTTCAACCGTCCTGTCGGCAGAAACTTGAAAATAAGCCAAAAGAAGAGGATTACTTTTATGCTAACCCACACGAATGCCTGGCCAATTCAAGATTTTGCAGCCGAACCAAGGATGCAATCAGTGTAAGGTGAGCGTCAAGTCAAGTTGTAACCTCACCGAGCCAAGTTATTATGGCGACGTGCAGTGGACTGAAGCCAGCAGCACAGCAGGCAGAGTCCATCTTGATCGTTTAACCGGTTTTCCTGATCTCCTGTTGTATAGACCTGCTCGCCAAGCTTGGAAAAGTTTGCAGAAAGAATGGAAGGGGACACGATGATGTCATTCTTCGAGAACTTGTCAACCCTGGATGATGCCCTCACTCGGAATGCTTTCCTGCAAAGCATCAAGGGAAAAACAGAATGAGAACCTTAAGATCACAGCACTTAACCAAGATAGCATCATAGCAACAGTAAAGGTTCTAAGAAATGCCGTCCTGATGAACTCCTCAAGTCAACTGGTGCAGCTTGAGAGCAGTTGGGAGAAATAGCATCAATACTAGCTCGTTCAACCTGCGCCGGCAGCTCAAAGCTCATGAACCCATCCAGTCCCAGAAGCGCGAGAGCTCGCAAAGATCGGGTCGGCCGCGGCGCATACCAGCGAAGAAGGGGGCGCAATCTCGGAAGCGAACGGTGGGGGTAACTACCTGGGCGAGGAGAAGGCGAGGCGGCGGCCGAGGGAGGCGGCGCGCGGCGAGGCGAAGGTCGAGCACAGCGACGACGACGACGACGGCGACGCCATCTCTCTCTCTCTCTTTCTCTCTCCACCAACTCCCTCTCGAGGAGCAGCGAGAGCTTTTGATTTGGTGAAGCGGTGGCGGCTAGGAGGCGTCGCGTAGGAGGAGAGGAGAGGAGAGGGAAATCTGGCTCCGCTTCGCCTCGTTATCTGCTCGCTGCTGCACCCAAGCCGCAGCCGGTCCACATAAATCGCAGCGTGGGGGCCAGCGAATTTCGTCGCGTTTTTGGGTTGGGGAGGAGTTTTTGGTTGGTTAGTTGGTGGCGGCTCTGAGGCGAGCCAGCCAAGGCCAAGCCAACGACCGCGGTTTCGTCCTCTACCAAACCCGCACCACCACTGCGCGCGTGTGGTTGCAGCATTTTTGCACCTGCACCGCACCGGAAACGGCACGAAAATGAAAGAGCATCCGCATCTCGAACTGGCATCTCTCTTCCAGTCTTCCTCGCCCACCTTCCGTGCGGCAGTGGCGAAACTATACTATGTGCCAGATTCCTAATTTCGGACTTAAAAATACTAGAATGTGCAGTTATGTGCTGAAATTTTCTAGATTCTCAATGGTAGTGCACCCCTCTTA]


>consensus_5604#1 TTAGAACCATTACAAGCTGCATTTCCAAAACTTGTAAGAAAGGAGACGCTGCTAGACTTG GAAGCTCTACGACAATTCCAGAACCATTCTTCTCAGATGGCTGCACTTGACTTCATTGTA TCCACAGCCAGTGATATTTTCATTCCTACTTATGATGGTAACATGGCAAAACTTGTTGAA GGTCACCGGAGGTTCCTGGGTTTCAGGAGAAGTGTGCTACTAGACCGACAGAAATTGGTT GGATTTATAGATCTGTACAACAATAAGACAATCTCTTGGAACAATTTTGCATCTTCTGTC CAGGAAACTCATAGAAATCGTGTAGTTCAACCGTCCTGTCGGCAGAAACTTGAAAATAAG CCAAAAGAAGAGGATTACTTTTATGCTAACCCACACGAATGCCTGGCCAATTCAAGATTT TGCAGCCGAACCAAGGATGCAATCAGTGTAAGGTGAGCGTCAAGTCAAGTTGTAACCTCA CCGAGCCAAGTTATTATGGCGACGTGCAGTGGACTGAAGCCAGCAGCACAGCAGGCAGAG TCCATCTTGATCGTTTAACCGGTTTTCCTGATCTCCTGTTGTATAGACCTGCTCGCCAAG CTTGGAAAAGTTTGCAGAAAGAATGGAAGGGGACACGATGATGTCATTCTTCGAGAACTT GTCAACCCTGGATGATGCCCTCACTCGGAATGCTTTCCTGCAAAGCATCAAGGGAAAAAC AGAATGAGAACCTTAAGATCACAGCACTTAACCAAGATAGCATCATAGCAACAGTAAAGG TTCTAAGAAATGCCGTCCTGATGAACTCCTCAAGTCAACTGGTGCAGCTTGAGAGCAGTT GGGAGAAATAGCATCAATACTAGCTCGTTCAACCTGCGCCGGCAGCTCAAAGCTCATGAA CCCATCCAGTCCCAGAAGCGCGAGAGCTCGCAAAGATCGGGTCGGCCGCGGCGCATACCA GCGAAGAAGGGGGCGCAATCTCGGAAGCGAACGGTGGGGGTAACTACCTGGGCGAGGAGA AGGCGAGGCGGCGGCCGAGGGAGGCGGCGCGCGGCGAGGCGAAGGTCGAGCACAGCGACG ACGACGACGACGGCGACGCCATCTCTCTCTCTCTCTTTCTCTCTCCACCAACTCCCTCTC GAGGAGCAGCGAGAGCTTTTGATTTGGTGAAGCGGTGGCGGCTAGGAGGCGTCGCGTAGG AGGAGAGGAGAGGAGAGGGAAATCTGGCTCCGCTTCGCCTCGTTATCTGCTCGCTGCTGC ACCCAAGCCGCAGCCGGTCCACATAAATCGCAGCGTGGGGGCCAGCGAATTTCGTCGCGT TTTTGGGTTGGGGAGGAGTTTTTGGTTGGTTAGTTGGTGGCGGCTCTGAGGCGAGCCAGC CAAGGCCAAGCCAACGACCGCGGTTTCGTCCTCTACCAAACCCGCACCACCACTGCGCGC GTGTGGTTGCAGCATTTTTGCACCTGCACCGCACCGGAAACGGCACGAAAATGAAAGAGC ATCCGCATCTCGAACTGGCATCTCTCTTCCAGTCTTCCTCGCCCACCTTCCGTGCGGCAG TGGCGAAACTATACTATGTGCCAGATTCCTAATTTCGGACTTAAAAATACTAGAATGTGC AGTTATGTGCTGAAATTTTCTAGATTCTCAATGGTAGTGCACCCCTCTTA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5604#0      AAAGAAAAAAAAAATCGCAGCTAGGCCTCTCCCGAATCTTCTGGAACCTTCTCGAACCAG 60
consensus_5604#1      ------------------------------------------------------------
                                                                                  

consensus_5604#0      GAGGCGGAGGAGGAGCTGCTGCTGCCGCGGCTGCCAATGCCGGTGGCGGGGATCAGGAGG 120
consensus_5604#1      ---------TTAGAACCATTACAAGCTGCATTTCCAAAACTTGTAAGAA-----AGGAGA 46
                                  ** *   * *   *     * ****  *  **          ***** 

consensus_5604#0      AGGAGGAGGAGGAGGGGGCGGTGGATGTAGGGTGGGGGAGCGATGGCGAGGTCGAGGCCT 180
consensus_5604#1      CGCTGCTAGACTTGGAAGCTCTACGACAATTCCAGAACCATTCTTCTCAGATGGCTGCAC 106
                       *  *   **   **  **  *      *     *        *    ** * *  **  

consensus_5604#0      AGGGTTTGGCTCCTGGCGGGGTGCAGCGCCGTGCTGCTGTGGGCCTTCGTCGGGCAGCTC 240
consensus_5604#1      TTGACTTCATTGTATCCACAGC-CAGTGATATTTTCATTCCTACTTATGATGGTAACATG 165
                        *  **   *     *   *  *** *   *  *  *     * *  *  **  *  * 

consensus_5604#0      GTGG---CCGTCGGACGCCTCCTCGCCTTGTTCGGCCTCGCCGGCGACGCGGAGCCCTCG 297
consensus_5604#1      GCAAAACTTGTTGAAGGTCACCGGAGGTTCCTGGGTTTCA--GGAGAAGTGTGCTACTAG 223
                      *        ** * * * * **     **  * **  **   ** ** * *     ** *

consensus_5604#0      CCTCCGCCCACCGCGCTTCCGCCTCGAAGAGTCTATAAGAGTAA--TGGTTATCTGAAGG 355
consensus_5604#1      AC-CGACAGAAATTGGTTGGATTTATAGATCTGTACAACAATAAGACAATCTCTTGGAAC 282
                       * *  *  *    * **     *  *    * ** ** * ***     *    ** *  

consensus_5604#0      TATCTTGCAATGGGGGTTTGAATCAGATGCGTTCAGAGATATGTGACATGGTGGCGGTTG 415
consensus_5604#1      AATTTTGCATC------TTCTGTCCAGGAAACTCATAGAAATCGTGTAGTTCAACCGT-- 334
                       ** *****        **   **        *** *** **     *      * **  

consensus_5604#0      CTCGCTTGCTAAACCTTACAATGGTTGTCCCAGAACTAGACAAGAGGTCATTCTGGGCTG 475
consensus_5604#1      CCTGTCGGCAGAAACTTGAAAA---TAAGCCAAAA---GAAGAGGATTACTTTTATGCTA 388
                      *  *   **  ** ***  **    *   *** **   **  **   *  ** *  *** 

consensus_5604#0      ATCAAAGCAATTTTGAAGATATATTTGATGTTAAACATTTCATTGACACATTAAGAGATG 535
consensus_5604#1      ACCCACACGAATGCCTGGCCA--------ATTCAAGATTTTGCAGCCGAACCAAG-GATG 439
                      * * *  * * *     *  *         ** ** ****    * *  *  *** ****

consensus_5604#0      AAGTGCACATTGTTAAACAGCTTCCGAAGAGGTTTGGTCCAGAGGATTCAAACAATATAC 595
consensus_5604#1      CAAT---CAGTGTAAGGTGAGCGTCAA----GTCAAGTT--GTAACCTCACCGAGCCAAG 490
                       * *   ** *** *         * *    **   **   *     ***   *    * 

consensus_5604#0      TTAATATGCCACCTGTGAGCTGGTCTGATG--AAAAATATTACTTGCATCAGATCTTACC 653
consensus_5604#1      TTATTATGGCGAC-GTGCAGTGGACTGAAGCCAGCAGCACAGCAGGCAGAGTCCATCTTG 549
                      *** **** *  * ***   *** **** *  *  *  *   *  ***       *    

consensus_5604#0      ATTATTCAGCAAATATAGCGTCATCCATTTTAACAAGACGGATGCTCGGTTAGCAAACAA 713
consensus_5604#1      ATCGTTTAACCGGTTTTCCTGATCTCCTGTTGTATAGAC--CTGCTCGCCAAGCTTGGAA 607
                      **  ** * *   * *  *      * * **    ****   ******   ***    **

consensus_5604#0      TGGTATCAGTACACAGCTTCAACTACTTAGGTGCCGTGTTAATTTTCATGCACTGAAGTT 773
consensus_5604#1      AAGTTTGCAGAAAGAATGGAAGGGGACACGATG--ATGTCATTCTTCGAGAACTT--GTC 663
                        ** *    * * *     *        * **   *** * * ***  * ***   ** 

consensus_5604#0      CACCCCTCAAATTGAGGCCTTGGGGAATAAACTGGTGCAGAAACTTCAGGCCAAGGGATC 833
consensus_5604#1      AACCCTGGATGATGCCCTCACTCGGAATGCTTTCCTGCA-AAGCATCAAGGGAAAAACAG 722
                       ****   *   **    *    *****    *  **** ** * *** *  **      

consensus_5604#0      ATTTGCAGCCTTGCATTTACGCTATGAGATGGACATGCTGGCCTTTTCTGGTTGCAATCA 893
consensus_5604#1      AATGAGAACCTTAAGATCACAGCACTTAACCAAGATAGCA-----TCATAGCAACAGTAA 777
                      * *   * ****    * **   *    *   * **         *  * *   ** * *

consensus_5604#0      TGGTCTTTCTCAAGAAGAAGCTGAAGAGCTCAAAAGAATGAGATATGCTTATCCATGGTG 953
consensus_5604#1      AGGTTCTAAGAAATGCCGTCCTGATGAACTCCTCAAGTCAACTGGTGCAGCTTGAGAGCA 837
                       ***  *    **       **** ** ***   *     *    ***   *  *  *  

consensus_5604#0      GAGAGAAAAGGAAATTGATCCACAAGCTAAGAGATTGCAAGGGCTATGCCCACTTACACC 1013
consensus_5604#1      GTTGGGA---GAAATAGCATCA-ATACTAGCTCGTTCAACCTGCGCCGGCAGCTCAAAGC 893
                      *   * *   ***** *   ** *  ***     **  *   **   * *  ** * * *

consensus_5604#0      TGAGGAGACATCTTTTATTCTGAAAGCTCTGGGATTTCAGAAGGACACTCTCATATACAT 1073
consensus_5604#1      TCATGA-ACCCATCCAGTCCCAGAAGCGC-GAGAGCTCGCAAAGATCGGGTCGGCCGCGG 951
                      * * ** **   *    * *   **** * * **  **  ** **     **     *  

consensus_5604#0      TGC-TGCCGGTGAAATTTATGGGGGAGAAAAAAGATTAGAACC--ATTACAAGCTGCATT 1130
consensus_5604#1      CGCATACCAGCGAA------GAAGGGGGCGCAATCTCGGAAGCGAACGGTGGGGGTAACT 1005
                       ** * ** * ***      *  ** *    **  *  *** *  *      *    * *

consensus_5604#0      TCCAAAACTTGTAAGAAAGGAGACGCTGCTAGACTTGGAAGCTCTACGACAATTCCAGAA 1190
consensus_5604#1      ACCTGGGCGAGGAGAAGGCGAGGCGGCGGCCGAGGGAGGCGGCGCGCGGCGAGGCGAAGG 1065
                       **    *  * *  *   *** **  *   **    *  *     ** * *  * *   

consensus_5604#0      CCATTCTTCTCAGATGGCTGCACTTGACTTCATTGTATCCACAGCCAGTGATATTTTCAT 1250
consensus_5604#1      TCGAGCACAGC-GACGACGAC----GACGACGGCGACGCCATCTCT-------CTCTCTC 1113
                       *   *    * ** * *  *    ***  *   *   ***   *         * **  

consensus_5604#0      TCCTACTTATGATGGTAACATGGCAAAACCTGTTGAAGGTCACCGGAGGTTCCTGGGTTT 1310
consensus_5604#1      TCTTTCTCTCTCCACCAACTC-------CCTCTCGAGGAGCAGCGAGAGCTTTTGATTTG 1166
                      ** * **         ***         *** * ** *  ** **   * *  **  ** 

consensus_5604#0      CAGGAGAAGTGTGCTACTAGACCGACAGAAATTGGTTGGATTTATAGATCTGTACAACAA 1370
consensus_5604#1      GTGAAGCGGTG-GCGGCTAGGAGGCGTCGCGTAGGAGGAGAGGAGAGGAGAGGGAAATC- 1224
                        * **  *** **  ****   *       * **  *     * **    *   **   

consensus_5604#0      TAAGACAATCTCTTGGAACAATTTTGCATCTTCTGTCCAGGAAACTCATAGAAATCGTGT 1430
consensus_5604#1      TGGCTCCGCTTCGCCTCGTTATCTGCTCGCTGCTGCACCCAAGCCGCAGCCGGTCCACAT 1284
                      *    *    **        ** *     ** ***  *   *  * **       *   *

consensus_5604#0      AGTTCAACCGTCCTGTCGGCAGAAACTTGAAAATAAGCCAAAAGAAGAGGATTACTTTTA 1490
consensus_5604#1      AAATCG-CAGCGTGGGGGCCAGCGAATTTCGTCGCGTTTTTGGGTTGGGGAGGAGTTTTT 1343
                      *  **  * *    *  * ***  * **               *  * ***  * **** 

consensus_5604#0      TGCTAACCCACACGAATGCCTGGCCAATTCAAGATTTTGCAGCCGAACCAAGGATGCAAT 1550
consensus_5604#1      GGTTGGTT------AGTTGGTGGCGGCTCTGAGGCGAGCCAGCCAAGGCCAAG--CCAAC 1395
                       * *          * *   ****   *   **      ***** *  * * *   *** 

consensus_5604#0      CAGTGTAAGGTGAGCGTCAAGTCAAGTTGTAACCTCACCGAGC-CAAGTTATTATGGCGA 1609
consensus_5604#1      GACCGCGGTTTCGTCCTCTACCAAACCCGCACCACCACTGCGCGCGTGTGGTTGCAGCAT 1455
                       *  *     *   * ** *   **   * * *  *** * ** *  **  **   **  

consensus_5604#0      CGT-GCAG-TGGACTGAACCC--AGCAGCACAGCAGGCAGAGTCCATCTTGATCGTTTAA 1665
consensus_5604#1      TTTTGCACCTGCACCGCACCGGAAACGGCACGAAAATGAAAGAGCATCCGCATC-TCGAA 1514
                        * ***  ** ** * ***   * * ****   *   * **  ****   *** *  **

consensus_5604#0      CCGGTTTTCCTGATCTCCTGTTGTATAGGTCAGCCTTTTCGCTTTGCGATTGATTGATTC 1725
consensus_5604#1      CTGGCATCTCT--CTTCCAGTCTTCCTCGCCCACCTTC-CGTGCGGC-AGTGGCGAAACT 1570
                      * **  *  **    *** **  *    * *  ****  **    ** * **    *   

consensus_5604#0      ATTTTTCACTTGCCGAATGCAGAATATGAATGCCCTTCTAAAGCATGTAAATTGGGCTGG 1785
consensus_5604#1      ATACT--ATGTGCCAGATTCCTAATTTCGGA----CTTAAAAATAC-TAGAATGTGC-AG 1622
                      **  *  *  ****  ** *  *** *         *  ***  *  ** * ** **  *

consensus_5604#0      TTGTTTACTGTTCGTGTTCATGACAATCAAT--TAATTCATGATGATAGCCAAAGCAAAA 1843
consensus_5604#1      TTATGTGCTGAA-ATTTTCTAGATTCTCAATGGTAGTGCACCCCTCTTA----------- 1670
                      ** * * ***    * ***  **   *****  ** * **      *             

consensus_5604#0      TACATGCTTTTCTATGAAAA 1863
consensus_5604#1      --------------------
                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)