These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5622#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 816 fasta sequence [TCGCCCTCTTCACCAAGAAAGAAAACAGGCGCACGCCTCGCCTCGCCTCGCCGCCGGCGGCCACCGTCTCCGCCGCCTCCTGCCCCCAACCCAGGAACCCCCGGCGAGAGAGCTCGATGGACCAGGCGGGGTCGATGGAGGAGCGGGTCATCACCGAGCGGATCCGGCGGAAGCTGGAGGAGGTGAACGCCGCCGCGCAGAAGCACCTC-GCCGGCGTCCAGGACCACGTCAACTTCACCATGCAGCAAGCGTACTTCAAGTGTGCGTATGAATGCTTTGATCGCCGAAGAAGTCAAGAAGGGATCAACAATTGTGTTGAGAACTGCAGCGTGCCT-GTCCTTACTGCCAACAATGTTGTTGAGACTGAGATGGCTAAATTCCAGGAGCGGCTGAATCGATCTTTGATGGTGTGCCAAGATAAATTTGAAGCAGCAAAGCTCCAGAAGATGAAAACACATGCGACTGAGGAGCTAGAAGCATGCGTAAACAGATCTATTGATGACAGTATCAGGGTCCTGCCCCATCTGGTTGATCAGATCAAGTCCACCCTCTCCATGAATTAGAGA-GATCAGAAGAAGTTCAGAACTAAACAGTAGAATCTTCCTCGTAAACTATTTCAGCTTTTACAAAAAGCATTTTCACTAATTTTGGCACCAAGATCGTTGGCCAAATTACTGCCCTTTGTTAACATGAGTATGACATATGAGCGGCATATCGTATTTTGTGTGCCTTGAGCATTTTGTTCGGAACCACACTTTGTTGCAGAGCTGATTTATCGAAAGATGGTGCAATAATAGAAGATGATATCCTCATTTG] [+] EMBL AK107906 [TCGCCCTCTTCACCAAGAAAGAAAACAGGCGCACGCCTCGCCTCGCCTCGCCGCCGGCGGCCACCGTCTCCGCCGCCTCCTGCCCCCAACCCAGGAACCCCCGGCGAGAGAGCTCGATGGACCAGGCGGGGTCGATGGAGGAGCGGGTCATCACCGAGCGGATCCGGCGGAAGCTGGAGGAGGTGAACGCCGCCGCGCAGAAGCACCTC GCCGGCGTCCAGGACCACGTCAACTTCACCATGCAGCAAGCGTACTTCAAGTGTGCGTATGAATGCTTTGATCGCCGAAGAAGTCAAGAAGGGATCAACAATTGTGTTGAGAACTGCAGCGTGCCT GTCCTTACTGCCAACAATGTTGTTGAGACTGAGATGGCTAAATTCCAGGAGCGGCTGAATCGATCTTTGATGGTGTGCCAAGATAAATTTGAAGCAGCAAAGCTCCAGAAGATGAAAACACATGCGACTGAGGAGCTAGAAGCATGCGTAAACAGATCTATTGATGACAGTATCAGGGTCCTGCCCCATCTGGTTGATCAGATCAAGTCCACCCTCTCCATGAATTAGAGA GATCAGAAGAAGTTCAGAACTAAACAGTAGAATCTTCCTCGTAAACTATTTCAGCTTTTACAAAAAGCATTTTCACTAATTTTGGCACCAAGATCGTTGGCCAAATTACTGCCCTTTGTTAACATGAGTATGACATATGAGCGGCATATCGTATTTTGTGTGCCTTGAGCATTTTGTTCGGAACCACACTTTGTTGCAGAGCTGATTTATCGAAAGATGGTGCAATAATAGAAGATGATATCCTCAT ] [+] EMBL OSC28601 [ CACCGAGCGGATCCGGCGGAAGCTGGAGGAGGTGAACGCCGNCGCGCAGAAGCACCTCGGNCGGCGTCCAGGACCACGTCAACTTCACCATGGAGNAAGCGTACTTNAAGTNTGCGTATGAATNCTTTGATCGNCGNAGAAGTCAAGANGGGATCAACAATTGTGTTGAGAACTGCAGCGTGCCTCTTCCTTACTGCCAACANTGTTGTTGAGACTGAGATGGCTAAATTCCAGGAGCGGCTGAATCGATCTTTGATGGTGTNCCA ] [-] EMBL D42574 [ TGAATTAGAGANGATNAGAAGAAGTTCAG ACT AACAGTAGAATCTTCCTCGTAAACTATTTCAGCTTTTACAAAAA CATTTTCACTAATTTTGGCACCAAGATCGTTGNNNAAATTACTGCCCTTTGTTAACATGAGTATGACATATGAGCNGCATATCGTATTTTGTGTGCCTTGAGCATTTTGTTCGNAACCACACTTTGTTGCAGAGCTGATTTATCGAAAGATGGTGCAATAATAGAAGATGATATCCTntgttg] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||