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Oryza sativa
cluster # 563 cluster # 563       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_563#0 length = 1195 sequences # 2  

consensusID : consensus_563#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1195
fasta sequence
                              [ATAAAATTTGGCGGGGAGAAGCCACGACCGTTCGCCGGCGTTGCGTCTCCCGCCGCGGTGACCTCACCTCTCTTCCTCGCCGCCGGCGGCCGCGCGTCCATCGCGTCGCCGTCGCCGCCATGGCCGCCACCGCACTCCAACTCCCAGTGGCCAGCTCGCAACGTCTGACGCTGAGGCGTTTCCCCGGCAGCGGCTCGTTGGGTCGGTACTCTGGGTTGCGGTGGCCCGTCGCGGCGCAGGCGAGGAGGGCGGCGGAGGAGGGGTTTCGTCTCCGTGTCGCGTTCAACCCCTCCGGGAACTTCGACCTCTCCCTCTCCACCGACCAAGACGATGCCCCACAAGTTGAGCCTCCACCACCACCTACAGAAGGTCGCTTTGAGATTGTCATCAACACCGATATCATCCGGACGCTCGACCTTTCGCCTGTTCATGAAGTACTTGGTGACTTGAATTCCCTGACACCAGCTCAAACAAGAAATCTCTTGGATCGAACGGTCGGGTTTACTATAAACTATGAGAGGGAGGATCCATATGATGTGAGGGAGCTGTCAGAGTTCCCTGATATAAGGCTATGGTTTGTGAGGCTTGATGCTTGTTACCCTTGGTTCCCTGTTGTGCTTGATTGGAGAGCTGGTGAACTTGCCAGATATGCCGCAATGCTGGCCCCTCACCAGATGAGCATGAGGCTTGGTGTGGTCTTCAACCCGGAGGCGCTGGAGCTGTTTGTGATGAAGAAGGTGTTCATTGTTTACTCATGGCTAAAGCAGCAGGAACATCCTAAACCTGGACTCAAGACGGCTGACATGGCCAGGATGCTTGGTTTCGGTATAGGAGATGAATTATTCGACTTGATTGGGAAGTATCCTGCTGGTCCTTCATGAATCTATCTCCATAACCTAGAGAATTTTGTCAATAATAGGCATCACATCATACCTTTTTC-TTTTTTTTTTAAGCATCACCCGGGGCGAAATGCTCACCTGAATATGGATTACATCATACTGAATCAAATGATAACTGTTTTCAGTCGTCTGGGCTTTGCTATATGTTGTTGTTGTCTACAGGAAACAATTCAATGTGTAAATAGTGCCAAAGAAATCAAATTTTAGCTCAGGAGTACAGTTTGAGATTTTGCTTCTGGTGCTAGTAACTTTGTAAGCTCCTGCAACTGTGATATGAATATAATTTTGCCACTAAC]

[+] EMBL AK071197             [ATAAAATTTGGCGGGGAGAAGCCACGACCGTTCGCCGGCGTTGCGTCTCCCGCCGCGGTGACCTCACCTCTCTTCCTCGCCGCCGGCGGCCGCGCGTCCATCGCGTCGCCGTCGCCGCCATGGCCGCCACCGCACTCCAACTCCCAGTGGCCAGCTCGCAACGTCTGACGCTGAGGCGTTTCCCCGGCAGCGGCTCGTTGGGTCGGTACTCTGGGTTGCGGTGGCCCGTCGCGGCGCAGGCGAGGAGGGCGGCGGAGGAGGGGTTTCGTCTCCGTGTCGCGTTCAACCCCTCCGGGAACTTCGACCTCTCCCTCTCCACCGACCAAGACGATGCCCCACAAGTTGAGCCTCCACCACCACCTACAGAAGGTCGCTTTGAGATTGTCATCAACACCGATATCATCCGGACGCTCGACCTTTCGCCTGTTCATGAAGTACTTGGTGACTTGAATTCCCTGACACCAGCTCAAACAAGAAATCTCTTGGATCGAACGGTCGGGTTTACTATAAACTATGAGAGGGAGGATCCATATGATGTGAGGGAGCTGTCAGAGTTCCCTGATATAAGGCTATGGTTTGTGAGGCTTGATGCTTGTTACCCTTGGTTCCCTGTTGTGCTTGATTGGAGAGCTGGTGAACTTGCCAGATATGCCGCAATGCTGGCCCCTCACCAGATGAGCATGAGGCTTGGTGTGGTCTTCAACCCGGAGGCGCTGGAGCTGTTTGTGATGAAGAAGGTGTTCATTGTTTACTCATGGCTAAAGCAGCAGGAACATCCTAAACCTGGACTCAAGACGGCTGACATGGCCAGGATGCTTGGTTTCGGTATAGGAGATGAATTATTCGACTTGATTGGGAAGTATCCTGCTGGTCCTTCATGAATCTATCTCCATAACCTAGAGAATTTTGTCAATAATAGGCATCACATCATACCTTTTTC TTTTTTTTTTAAGCATCACCCGGGGCGAAATGCTCACCTGAATATGGATTACATCATACTGAATCAAATGATAACT                                                                                                                                                                                   ]
[+] EMBL AK061061             [                                                CCCGCCGCGGTGACCTCACCTCTCTTCCTCGCCGCCGGCGGCCGCGCGTCCATCGCGTCGCCGTCGCCGCCATGGCCGCCACCGCACTCCAACTCCCAGTGGCCAGCTCGCAACGTCTGACGCTGAGGCGTTTCCCCGGCAGCGGCTCGTTGGGTCGGTACTCTGGGTTGCGGTGGCCCGTCGCGGCGCAGGCGAGGAGGGCGGCGGAGGAGGGGTTTCGTCTCCGTGTCGCGTTCAACCCCTCCGGGAACTTCGACCTCTCCCTCTCCACCGACCAAGACGATGCCCCACAAGTTGAGCCTCCACCACCACCTACAGAAGGTCGCTTTGAGATTGTCATCAACACCGATATCATCCGGACGCTCGACCTTTCGCCTGTTCATGAAGTACTTGGTGACTTGAATTCCCTGACACCAGCTCAAACAAGAAATCTCTTGGATCGAACGGTCGGGTTTACTATAAACTATGAGAGGGAGGATCCATATGATGTGAGGGAGCTGTCAGAGTTCCCTGATATAAGGCTATGGTTTGTGAGGCTTGATGCTTGTTACCCTTGGTTCCCTGTTGTGCTTGATTGGAGAGCTGGTGAACTTGCCAGATATGCCGCAATGCTGGCCCCTCACCAGATGAGCATGAGGCTTGGTGTGGTCTTCAACCCGGAGGCGCTGGAGCTGTTTGTGATGAAGAAGGTGTTCATTGTTTACTCATGGCTAAAGCAGCAGGAACATCCTAAACCTGGACTCAAGACGGCTGACATGGCCAGGATGCTTGGTTTCGGTATAGGAGATGAATTATTCGACTTGATTGAGAAGTATCCTGCTGGTCCTTCATGAATCTATCTCCATAACCTAGAGAATTTTGTCAATAATAGGCATCACATCATACCTTTTTCTTTTTTTTTTTAAGCATCACCCGGGGCGAAATGCTCACCTGAATATGGATTACATCATACTGAATCAAATGATAACTGTTTTCAGTCGTCTGGGCTTTGCTATATGTTGTTGTTGTCTACAGGAAACAATTCAATGTGTAAATAGTGCCAAAGAAATCAAATTTTAGCTCAGGAGTACAGTTTGAGATTTTGCTTCTGGTGCTAGTAACTTTGTAAGCTCCTGCAACTGTGATATGAATATAATTTTGCCACTAAC]


>consensus_563#0 ATAAAATTTGGCGGGGAGAAGCCACGACCGTTCGCCGGCGTTGCGTCTCCCGCCGCGGTG ACCTCACCTCTCTTCCTCGCCGCCGGCGGCCGCGCGTCCATCGCGTCGCCGTCGCCGCCA TGGCCGCCACCGCACTCCAACTCCCAGTGGCCAGCTCGCAACGTCTGACGCTGAGGCGTT TCCCCGGCAGCGGCTCGTTGGGTCGGTACTCTGGGTTGCGGTGGCCCGTCGCGGCGCAGG CGAGGAGGGCGGCGGAGGAGGGGTTTCGTCTCCGTGTCGCGTTCAACCCCTCCGGGAACT TCGACCTCTCCCTCTCCACCGACCAAGACGATGCCCCACAAGTTGAGCCTCCACCACCAC CTACAGAAGGTCGCTTTGAGATTGTCATCAACACCGATATCATCCGGACGCTCGACCTTT CGCCTGTTCATGAAGTACTTGGTGACTTGAATTCCCTGACACCAGCTCAAACAAGAAATC TCTTGGATCGAACGGTCGGGTTTACTATAAACTATGAGAGGGAGGATCCATATGATGTGA GGGAGCTGTCAGAGTTCCCTGATATAAGGCTATGGTTTGTGAGGCTTGATGCTTGTTACC CTTGGTTCCCTGTTGTGCTTGATTGGAGAGCTGGTGAACTTGCCAGATATGCCGCAATGC TGGCCCCTCACCAGATGAGCATGAGGCTTGGTGTGGTCTTCAACCCGGAGGCGCTGGAGC TGTTTGTGATGAAGAAGGTGTTCATTGTTTACTCATGGCTAAAGCAGCAGGAACATCCTA AACCTGGACTCAAGACGGCTGACATGGCCAGGATGCTTGGTTTCGGTATAGGAGATGAAT TATTCGACTTGATTGGGAAGTATCCTGCTGGTCCTTCATGAATCTATCTCCATAACCTAG AGAATTTTGTCAATAATAGGCATCACATCATACCTTTTTCTTTTTTTTTTAAGCATCACC CGGGGCGAAATGCTCACCTGAATATGGATTACATCATACTGAATCAAATGATAACTGTTT TCAGTCGTCTGGGCTTTGCTATATGTTGTTGTTGTCTACAGGAAACAATTCAATGTGTAA ATAGTGCCAAAGAAATCAAATTTTAGCTCAGGAGTACAGTTTGAGATTTTGCTTCTGGTG CTAGTAACTTTGTAAGCTCCTGCAACTGTGATATGAATATAATTTTGCCACTAAC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)