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Oryza sativa
cluster # 5640 cluster # 5640       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5640#0 length = 846 sequences # 3  

consensusID : consensus_5640#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 846
fasta sequence
                              [ATTGCTCATCTTGTGTGCTCCAGTCGAGCAGAGGTACAGAGGGCCTTATGTCTGTCAACCAACCCGTGAAACTCACCATGCTTATGCTATTATCATTGCTGCTGTTGTCTTATGGAGTTGGCAGCATTCAATGCGCAACGGTCCTTGCGAACAACACGGACATGTCCGCGTTGCTTGATTTCAGAGCCATCGCCAACGATCCAACAGGAGCCTTGGGCTCATGGAACAGCAGCATCCACTACTGCAAGTGGAGAGGCGTGACTTGCGGCTCGAAGCACCCAGAGCGAGTCACGGCGCTGAACCTCACCGGCTATGGCTTATCGGGCCCAATCGCCGCCTCTGTTGGGAATATATCGTTCCTTCATACACTTGACCTGTCCAGTAATCAATTTTCTGGCCAGATACCTTCTCTCAGCAATCTCCAGAAAATGCAATTCCTTAATCTTAGCTTCAATTCTTTAGAAGGGCATATTCCAGATAGCCTGACAAACTGTTCCAACCTAAGGCTAATAGACGTCTCTAGCAACTCTCTAGAAGGTGAAATTCCTCTCAGATTTGACCTGCTCTCTAACCTATTGGATTTAATACTTTCTTATAACAAACTTACCGGAGTCATCCCTCCAACCCTAAGCAATATCACTGGCGTACAAAAGCTACGTCTGGGATACAATAATCTACAGGGAAGCATTCCAGAAGAGCTTGGGAATTTGCCAAATTTATCGGTATTACTGTTGGGTGGGAATAAGCTATCAGGTGAGATCCCGCAGAGCCTTTTTAATCTCTCTTCCCTTCAAAGACTCGGGTTGGAGTTTAATGTGCTAGGANGATCGTTGCCATCAAATATTG]

[+] EMBL CB627108             [ATTGCTCATCTTGTGTGCTCCAGTCGAGCAGAGGTACAGAGGGCCTTATGTCTGTCAACCAACCCGTGAAACTCACCATGCTTATGCTATTATCATTGCTGCTGTTGTCTTATGGAGTTGGCAGCATTCAATGCGCAACGGTCCTTGCGAACAACACGGACATGTCCGCGTTGCTTGATTTCAGAGCCATCGCCAACGATCCAACAGGAGCCTTGGGCTCATGGAACAGCAGCATCCACTACTGCAAGTGGAGAGGCGTGACTTGCGGCTCGAAGCACCCAGAGCGAGTCACGGCGCTGAACCTCACCGGCTATGGCTTATCGGGCCCAATCGCCGCCTCTGTTGGGAATATATCGTTCCTTCATACACTTGACCTGTCCAGTAATCAATTTTCTGGCCAGATACCTTCTCTCAGCAATCTCCAGAAAATGCAATTCCTTAATCTTAGCTTCAATTCTTTAGAAGGGCATATTCCAGATAGCCTGACAAACTGTTCCAACCTAAGGCTAATAGACGTCTCTAGCAACTCTCTAGAAGGTGAAATTCCTCTCAGATTTGACCTGCTCTCTAACCTATTGGATTTAATACTTTCTTATAACAAACTTACCGGAGTCATCCCTCCAACCCTAAGCAATATCACTGGCGTACAAAAGCTACGTCTGGGATACAATAATCTACAGGGAAGCATTCCAGAAGAGCTTGGGAATTTGCCAAATTTATCGGTATTACTGTTGGGTGGGAATAAGCTATCAGGTGAGATCCCGCAGAGCCTTTTTA                                                                     ]
[+] EMBL CB626644             [     TCATCTTGTGTGCTCCAGTCGAGCAGAGGTACAGAGGGCCTTATGTCTGTCAACCAACCCGTGAAACTCACCATGCTTATGCTATTATCATTGCTGCTGTTGTCTTATGGAGTTGGCAGCATTCAATGCGCAACGGTCCTTGCGAACAACACGGACATGTCCGCGTTGCTTGATTTCAGAGCCATCGCCAACGATCCAACAGGAGCCTTGGGCTCATGGAACAGCAGCATCCACTACTGCAAGTGGAGAGGCGTGACTTGCGGCTCGAAGCACCCAGAGCGAGTCACGGCGCTGAACCTCACCGGCTATGGCTTATCGGGCCCAATCGCCGCCTCTGTTGGGAATATATCGTTCCTTCATACACTTGACCTGTCCAGTAATCAATTTTCTGGCCAGATACCTTCTCTCAGCAATCTCCAGAAAATGCAATTCCTTAATCTTAGCTTCAATTCTTTAGAAGGGCATATTCCAGATAGCCTGACAAACTGTTCCAACCTAAGGCTAATAGACGTCTCTAGCAACTCTCTAGAAGGTGAAATTCCTCTCAGATTTGACCTGCTCTCTAACCTATTGGATTTAATACTTTCTTATAACAAACTTACCGGAGTCATCCCTCCAACCCTAAGCAATATCACTGGCGTACAAAAGCTACGTCTGGGATACAATAATCTACAGGGAAGCATTCCAGAAGAGCTTGGGAATTTGCCAAATTTATCGGTATTACTGTTGGGTGGGAATAAGCTATCANGTGAGATCCCGCAGAGCCTTTTTAATCTCTCTTCCCTTCAAAGACTCGGGTTGGAGTTTAATGTGCTAGGANGATCGTTGCCATCAAATATTG]
[+] EMBL CB628732             [                                           CCTTATGTCTGTCAACCAACCCGTGAAACTCACCATGCTTATGCTATTATCATTGCTGCTGTTGTCTTATGGAGTTGGCAGCATTCAATGCGCAACGGTCCTTGCGAACAACACGGACATGTCCGCGTTGCTTGATTTCAGAGCCATCGCCAACGATCCAACAGGAGCCTTGGGCTCATGGAACAGCAGCATCCACTACTGCAAGTGGAGAGGCGTGACTTGCGGCTCGAAGCACCCAGAGCGAGTCACGGCGCTGAACCTCACCGGCTATGGCTTATCGGGCCCAATCGCCGCCTCTGTTGGGAATATATCGTTCCTTCATACACTTGACCTGTCCAGTAATCAATTTTCTGGCCAGATACCTTCTCTCAGCAATCTCCAGAAAATGCAATTCCTTAATCTTAGCTTCAATTCTTTAGAAGGGCATATTCCAGATAGCCTGACAAACTGTTCCAACCTAAGGCTAATAGACGTCTCTAGCAACTCTCTAGAAGGTGAAATTCCTCTCAGATTTGACCTGCTCTCTAACCTATTGGATTTAATACTTTCTTATAACAAACTTACCGGAGTCATCCCTCCAACCCTAAGCAATATCACTGGCGTACAAAAGCTACGTCTGGGATACAATAATCTACAGGGAAGCATTCCAGAAGAGCTTGGGAATTTGCCAAATTTATCGGTATTACTGTTGGGTGGG                                                                                                          ]


>consensus_5640#0 ATTGCTCATCTTGTGTGCTCCAGTCGAGCAGAGGTACAGAGGGCCTTATGTCTGTCAACC AACCCGTGAAACTCACCATGCTTATGCTATTATCATTGCTGCTGTTGTCTTATGGAGTTG GCAGCATTCAATGCGCAACGGTCCTTGCGAACAACACGGACATGTCCGCGTTGCTTGATT TCAGAGCCATCGCCAACGATCCAACAGGAGCCTTGGGCTCATGGAACAGCAGCATCCACT ACTGCAAGTGGAGAGGCGTGACTTGCGGCTCGAAGCACCCAGAGCGAGTCACGGCGCTGA ACCTCACCGGCTATGGCTTATCGGGCCCAATCGCCGCCTCTGTTGGGAATATATCGTTCC TTCATACACTTGACCTGTCCAGTAATCAATTTTCTGGCCAGATACCTTCTCTCAGCAATC TCCAGAAAATGCAATTCCTTAATCTTAGCTTCAATTCTTTAGAAGGGCATATTCCAGATA GCCTGACAAACTGTTCCAACCTAAGGCTAATAGACGTCTCTAGCAACTCTCTAGAAGGTG AAATTCCTCTCAGATTTGACCTGCTCTCTAACCTATTGGATTTAATACTTTCTTATAACA AACTTACCGGAGTCATCCCTCCAACCCTAAGCAATATCACTGGCGTACAAAAGCTACGTC TGGGATACAATAATCTACAGGGAAGCATTCCAGAAGAGCTTGGGAATTTGCCAAATTTAT CGGTATTACTGTTGGGTGGGAATAAGCTATCAGGTGAGATCCCGCAGAGCCTTTTTAATC TCTCTTCCCTTCAAAGACTCGGGTTGGAGTTTAATGTGCTAGGANGATCGTTGCCATCAA ATATTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)