cluster # 5659

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Oryza sativa
cluster # 5659 cluster # 5659 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5659#0 length = 1444 sequences # 3
consensusID : consensus_5659#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1444
fasta sequence
                              [TGTACAATGAACAATTGCTCTTTGGCATAAAATATTCATCACTTAGGTATTGAACATTGTGAGAAAAAACAACTAAAAATGTACTGACTTGCTAAAAATTTGTTGCGTAGCTGCTCATATCATATATGATACCTGAAACAACTTTCTCTGCATGATTTACTCTAGAAATTGCCCTTTTAGCCGTGTTTATCAGCTATCACTAGACACCAATCAACAATAGTTGCCATACGCTCGCACGGAATTTTGATCCCACCTGCAAGACATTTGCAGATTTCTCCAACCCCTTGGCTTTGAATCAGCCATACCCACATTTGCTTGTGCAAATTGGAGTCAATCAGTTAATCCCAGAGTAGCTCCTCTGCATCAATTCATCTTGAATATTCAAGCAGAGGTATGCAGTCTTCTCAGGCAGCCATCAATTCGATCTTTTTATGCCTATGATCACCATCATACAATGCAAATCAATCCATTGATCAAAGCATTTCAGTCATCAGAACGCTTGTCACAGGGAGAAACCCTATCCTGATGTGGTTGAGAAATCCAGTGCAACCCATCAAGCAATTCTGAGTACATCCTCTGGTCTAACGGCCCTCGCTTCCTCTCCTTCAGCTCCTCCAGCAGCTCGAACGCATCCTCTGCGCGCCCAGCCCTGCACATCTCCTCCATCAGTGTCCTGTAGGTGATCATATCTGGCTTCCTCTTGCAATCCAGCATATCTATAAGAACATTTCTTGATTCCTCAAATCTCCACTCCAACGCTAGCGCTGACACGGCCGTCATGTACACGCCACCAGTCGGCACAAATCCCTTCTCCCTCGCCTCCCGAAAGTACACCATTCCTTTGTCAGTCCTGCCCTTCTGGAACATGGCCTTGACAATGTAGCCATAGGTGAACTCATTGGCCTCACAGCCGTATAGCGGCATTTCACGGAACACCTTGAGTGCATCGTCTACCTCAAGGCACCGGGCATAGGCCTTGATGATTAGGTTGAGGAGGAAGGTGTCCGGGACCACGCCGGAGGCCTTCATCTGGCGGGAGAGGGACCGGACGGCGTGGAGGTAGACCATGGACGCCGGCGGGCGGCGGACGCGGCGCACGACGGAGGTGAGGAGGAGCGTGTAGGTCTCGACGTCCGGGCGGCAGGCGGCGGATGCCGGGAGCGACCGCATCTTGTTGAACATGTCGAAGGCGAGCGGGAAGAGGCGGCGGCGGGCGCAGCAGAAGCGGAGGCAGGCGTTGAAGAGCCGGAGGTCGGGGCCGCACGCCCCGGCGAGGACGTCGTAGACGAGGTTCTCCGCGGCGGCGGGGCGGCGGCCGGAGGAGGCCGCGGTCAGCGCCGCGAGGTAGGACGCGGGCGCGTGGCGGAACCCCGGGCGGAGCGCCGCCCACCGGAAGAGCGCGAGCGCGAGGTCCGGGTCGCGCTCGGAGGAGATCACATGCGGC]

[+] EMBL CB667208             [TGTACAATGAACAATTGCTCTTTGGCATAAAATATTCATCACTTAGGTATTGAACATTGTGAGAAAAAACAACTAAAAATGTACTGACTTGCTAAAAATTTGTTGCGTAGCTGCTCATATCATATATGATACCTGAAACAACTTTCTCTGCATGATTTACTCTAGAAATTGCCCTTTTAGCCGTGTTTATCAGCTATCACTAGACACCAATCAACAATAGTTGCCATACGCTCGCACGGAATTTTGATCCCACCTGCAAGACATTTGCAGATTTCTCCAACCCCTTGGCTTTGAATCAGCCATACCCACATTTGCTTGTGCAAATTGGAGTCAATCAGTTAATCCCAGAGTAGCTCCTCTGCATCAATTCATCTTGAATATTCAAGCAGAGGTATGCAGTCTTCTCAGGCAGCCATCAATTCGATCTTTTTATGCCTATGATCACCATCATACAATGCAAATCAATCCATTGATCAAAGCATTTCAGTCATCAGAACGCTTGTCACAGGGAGAAACCCTATCCTGATGTGGTTGAGAAATCCAGTGCAACCCATCAAGCAATTCTGAGTACATCCTCTGGTCTAACGGCCCTCGCTTCCTCTCCTTCAGCTCCTCCAGCAGCTCGAACGCATCCTCTGCGCGCCCAGCCCTGCACATCTCCTCCATCAGTGTCCTGTAGGTGATCATATCTGGCTTCCTCTTGCAATCCAGCATATCTATAAGAACATTTCTTGATTCCTCAAATCTCCACTCCAACGCTAGCGCTGACACGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB652277             [                                                                                                         CGTAGCTGCTCATATCATACTTTATAGCTGAAACAACTTTCTCTGCATGATTTACTCTAGAAATTGCCCTTTTAGCCGTGTTTATCAGCTATCACTAGACACCAATCAACAATAGTTGCCATACGCTCGCACGGAATTTTGATCCCACCTGCAAGACATTTGCAGATTTCTCCAACCCCTTGGCTTTGAATCAGCCATACCCACATTTGCTTGTGCAAATTGGAGTCAATCAGTTAATCCCAGAGTAGCTCCTCTGCATCAATTCATCTTGAATATTCAAGCAGAGGTATGCAGTCTTCTCAGGCAGCCATCAATTCGATCTTTTTATGCCTATGATCACCATCATACAATGCAAATCAATCCATTGATCAAAGCATTTCAGTCATCAGAACGCTTGTCACAGGGAGAAACCCTATCCTGATGTGGTTGAGAAATCCAGTGCAACCCATCAAGCAATTCTGAGTACATCCTCTGGTCTAACGGCCCTCGCTTCCTCTCCTTCAGCTCCTCCAGCAGCTCGAACGCATCCTCTGCGCGCCCAGCCCTGCACATCTCCTCCATCAGTGTCCTGTAGGTGATCATATCTGGCTTCCTCTTGCAATCCAGCATATCTATAAGAACATTTCTTGATTCCTCAAATCTCCACTCCAACGCTAGCGCTGACACGGCCGTCATGTACACGCCACCAGTCGGCACAAATCCCTTCTCCCTCGCCTCCCGAAAGTACACCATTCCTTTGTCAGTCCTGCCCTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB652276             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTATAAGAACATTTCTTGATTCCTCAAATCTCCACTCCAACGCTAGCGCTGACACGGCCGTCCTGTACACGCCACCAGTCGGCACAAATCCATTGTCCCTCGCCTCCAGAAAGTACACCATTCCTTTGTCAGTCCTGCCCTTCTGGAACATGGCCTTGACAATGTAGCCATAGGTGAACTCATTGGCCTCACAGCCGTATAGCGGCATTTCACGGAACACCTTGAGTGCATCGTCTACCTCAAGGCACCGGGCATAGGCCTTGATGATTAGGTTGAGGAGGAAGGTGTCCGGGACCACGCCGGAGGCCTTCATCTGGCGGGAGAGGGACCGGACGGCGTGGAGGTAGACCATGGACGCCGGCGGGCGGCGGACGCGGCGCACGACGGAGGTGAGGAGGAGCGTGTAGGTCTCGACGTCCGGGCGGCAGGCGGCGGATGCCGGGAGCGACCGCATCTTGTTGAACATGTCGAAGGCGAGCGGGAAGAGGCGGCGGCGGGCGCAGCAGAAGCGGAGGCAGGCGTTGAAGAGCCGGAGGTCGGGGCCGCACGCCCCGGCGAGGACGTCGTAGACGAGGTTCTCCGCGGCGGCGGGGCGGCGGCCGGAGGAGGCCGCGGTCAGCGCCGCGAGGTAGGACGCGGGCGCGTGGCGGAACCCCGGGCGGAGCGCCGCCCACCGGAAGAGCGCGAGCGCGAGGTCCGGGTCGCGCTCGGAGGAGATCACATGCGGC]




>consensus_5659#0
TGTACAATGAACAATTGCTCTTTGGCATAAAATATTCATCACTTAGGTATTGAACATTGT
GAGAAAAAACAACTAAAAATGTACTGACTTGCTAAAAATTTGTTGCGTAGCTGCTCATAT
CATATATGATACCTGAAACAACTTTCTCTGCATGATTTACTCTAGAAATTGCCCTTTTAG
CCGTGTTTATCAGCTATCACTAGACACCAATCAACAATAGTTGCCATACGCTCGCACGGA
ATTTTGATCCCACCTGCAAGACATTTGCAGATTTCTCCAACCCCTTGGCTTTGAATCAGC
CATACCCACATTTGCTTGTGCAAATTGGAGTCAATCAGTTAATCCCAGAGTAGCTCCTCT
GCATCAATTCATCTTGAATATTCAAGCAGAGGTATGCAGTCTTCTCAGGCAGCCATCAAT
TCGATCTTTTTATGCCTATGATCACCATCATACAATGCAAATCAATCCATTGATCAAAGC
ATTTCAGTCATCAGAACGCTTGTCACAGGGAGAAACCCTATCCTGATGTGGTTGAGAAAT
CCAGTGCAACCCATCAAGCAATTCTGAGTACATCCTCTGGTCTAACGGCCCTCGCTTCCT
CTCCTTCAGCTCCTCCAGCAGCTCGAACGCATCCTCTGCGCGCCCAGCCCTGCACATCTC
CTCCATCAGTGTCCTGTAGGTGATCATATCTGGCTTCCTCTTGCAATCCAGCATATCTAT
AAGAACATTTCTTGATTCCTCAAATCTCCACTCCAACGCTAGCGCTGACACGGCCGTCAT
GTACACGCCACCAGTCGGCACAAATCCCTTCTCCCTCGCCTCCCGAAAGTACACCATTCC
TTTGTCAGTCCTGCCCTTCTGGAACATGGCCTTGACAATGTAGCCATAGGTGAACTCATT
GGCCTCACAGCCGTATAGCGGCATTTCACGGAACACCTTGAGTGCATCGTCTACCTCAAG
GCACCGGGCATAGGCCTTGATGATTAGGTTGAGGAGGAAGGTGTCCGGGACCACGCCGGA
GGCCTTCATCTGGCGGGAGAGGGACCGGACGGCGTGGAGGTAGACCATGGACGCCGGCGG
GCGGCGGACGCGGCGCACGACGGAGGTGAGGAGGAGCGTGTAGGTCTCGACGTCCGGGCG
GCAGGCGGCGGATGCCGGGAGCGACCGCATCTTGTTGAACATGTCGAAGGCGAGCGGGAA
GAGGCGGCGGCGGGCGCAGCAGAAGCGGAGGCAGGCGTTGAAGAGCCGGAGGTCGGGGCC
GCACGCCCCGGCGAGGACGTCGTAGACGAGGTTCTCCGCGGCGGCGGGGCGGCGGCCGGA
GGAGGCCGCGGTCAGCGCCGCGAGGTAGGACGCGGGCGCGTGGCGGAACCCCGGGCGGAG
CGCCGCCCACCGGAAGAGCGCGAGCGCGAGGTCCGGGTCGCGCTCGGAGGAGATCACATG
CGGC
clustalw multiple alignements is not computed in this case