These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5665#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 782 fasta sequence [TTTTTTTTTTGGAGTATATACTTGCNTTAGTTGCTCTTCATTATTTGCATTGATCTTCCTCTT-GTGCATGACAAGGTACTAGTAGTACGGAATTTACATGGTTGGTACCAAAAGGGGGGCCCCAAATGGGAAAAAAGAAGAAGGGAGAA-AGGTGAAGAACTAAACAGGATTATGGCACAACAATGGCCAGACAGCCATCAGTTTCTCTCGTCCGTCGTTGATTAATTAGCTCTCTGCGCTTCTGCAATGTGGACACCATTTTCGAGCACCTGTGTTGGTGTAGAATCCACGATCGATCAGCGTCACGGGTTACCCTGCCGATGTAATCGCTTGGACGGC-CCAGATCACGCGCTTCTCTCTAGCTAGCCTCGCCGGTTAAATTCAATTGTTACAGCCTCAACCGTGTCCTGGACAGGCGATTCCACTCCACGAGCCGCAGCAAGAACTCCATCACCTCGGCGGG-CTCCTGG-AGGGAGAAGGAGGCGCTCGT-CTCCT-TGGGGTGC-TGGACCACCAAGGGATCCCCACGCCCTGCCCACGCCGCCGCAAAACCTGCCCGGATCATGCACACGGCTCGCCGATTAGTCCAACGTAGAAGAAGACGTACGTTGTCGCTAGCTGCACGCGACGAACCGGCCGTACGTTCGTCGAACCACTTGCAAACGAAGTAGTGGTAGCGTCTCGTGTTACTGCTGCTGCTACACGTAGTCGTAGCGTGGCAGCATGCAGTAATTTTTGTCGGTTAGTAGTACAAGTATTTATTTACCTTGAACGCGTCCTCGTCC] [-] EMBL BI807336 [TTTTTTTTTTGGAGTATATACTTGCNTTAGTTGCTCTTCATTATTTGCATGGATCTTCCTCTTGGTGCATGACAAGGTACTAGTAGTACGGAATTTACATGGTTGGTACCAAAAGGGGGGCCCCAAATGGGAAAAAAGAAGAAGGGAGAANAGGTGAAGAACTAAACAGGATTATGGCACAACAATGGCCAGACAGCCATCAGTTTCTCTCGTCCGTCGTTGATTAATTAGCTCTCTGCGCTTCTGCAATGTGGACACCATTTTCGAGCACCTGTGTTGGTGTAGAATCCACGATCGATCAGCGTCACGGGTTACCCTGCCGATGTAATCGCTTGGACGGCGCCAGATCACGCGCTTCTCTCTAGCTAGCCTCGCCGGTTAAATTCAATGGTTACAGCCTCAACCGTGTCCTGGACAGGNGATTCCACTCCACGAGCCG AGCAAGAACTCCATCACCTCGGAGGGCCTCCTGGCAGGGAGAAGGAGGCGCTCGTACTCCTCTGGGGTGC TGGACCACCAAGGGATCC ] [+] EMBL CB644545 [ CTTGCATTACTTGCTCTTCCTTATTTGCATTGATCTTCCTCTT GTGCATGACAAGGAACTATTAGTACGGAATTTACATGGTTGGTACCAAAAGGGGGGCCCCAAATGGGAAAAAAGAAGAAGGGAGAA AGGTGAAGAACTAAACAGGATTATGGCACAACAATGGCCAGACAGCCATCAGTTTCTCTCGTCCGTCGTTGATTAATTAGCTCTCTGCGCTTCTGCAATGTGGACACCATTTTCGAGCACCTGTGTTGGTGTAGAATCCACGATCGATCAGCGTCACGGGTTACCCTGCCGATGTAATCGCTTGGACGGC CCAGATCACGCGCTTCTCTCTAGCTAGCCTCGCCGGTTAAATTCAATTGTTACAGCCTCAACCGTGTCCTGGACAGGCGATTCCACTCCACGAGCCGCAGCAAGAACTCCATCACCTCGGCGGG CTCCTGG AGGGAGAAGGAGGCGCTCGT CTCCT TGGGGTGCTTGGA CACCA GGATCCCCACGCCCTGCCCACGCCGCCGCAAAACCTGCCCGGATCATGCACACGGCTCGCCGATTAGTCCAACGTAGAAGAAGACGTACGTTGTCGCTAGCTGCACGCGACGAACCGGCCGTACGTTCGTCGAACCACTTGCAAACGAAGTAGTGGTAGCGTCTCGTGTTACTGCTGCTGCTACACGTAGTCGTAGCGTGGCAGCATGCAGTAATTTTTGTCGGTTAGTAGTACAAGTATTTATTTACCTTGAACGCGTCCTCGTCC] [-] EMBL CB680752 [ CTCTTCATTATTTGCATTGATCTTCCTCTT GTGCATGACAAGGTACTAGTAGTACGGAATTTACATGGTTGGTACCAAAAGGGGGGCCCCAAATGGGAAAAAAGAAGAAGGGAGAA AGGTGAAGAACTAAACAGGATTATGGCACAACAATGGCCAGACAGCCATCAGTTTCTCTCGTCCGTCGTTGATTAATTAGCTCTCTGCGCTTCTGCAATGTGGACACCATTTTCGAGCACCTGTGTTGGTGTAGAATCCACGATCGATCAGCGTCACGGGTTACCCTGCCGATGTAATCGCTTGGACGGC CCAGATCACGCGCTTCTCTCTAGCTAGCCTCGCCGGTTAAATTCAATTGTTACAGCCTCAACCGTGTCCTGGACAGGCGATTCCACTCCACGAGCCGCAGCAAGAACTCCATCACCTCGGCGGG CTCCTGG AGGGAGAAGGAGGCGCTCGT CTCCT TGGG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||