cluster # 5667

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Oryza sativa
cluster # 5667 cluster # 5667 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5667#0 length = 461 sequences # 3

consensusID : consensus_5667#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 461
fasta sequence

                              [TATGATGCCAAGTAACTGTGGCAATCTAAGACTTGTACAGTGGCCATTGTTTCTTCTGACTAGCAAGATTATGTTGGCGAATGACTATGCTTCAGATTGTAAAGACTCACAGTATGAGTTATGGGACAGAATATCAAGAGATGAATACATGGCCTACGCCGTCAAGGAATGCTATTTCAGTGCAGAGAGAATTCTTCACTCTTTAGTTGATGGTGAAGGGCAGCGTTGGGTTGAAAGGCTTTTTCGGGATCTGAATGAAAGTATAGCACAAGGTTCACTTTTAGTGACCATAAATCTCAAGAAGCTGCAATTAGTCCAGTCGAGGCTTACTGGTTTGACAGGACTTCTGATACGCGATGAAACTGCTGATCGTGCAGCTGGTGTTACAAAAGCT-CTCCGTGAGCTTTATGAGGTTGTTACCCATGAGTTTCTGGCACCGAACCCGAAGGGNCCNCNTGGTA]

[+] EMBL OSS1515A             [TATGATGCCAAGTAACTGTGGCAATCTAAGACTTGTACAGTGGCCATTGTTTCTTCTGACTAGCAAGATTATGTTGGCGAATGACTATGCTTCAGATTGTAAAGACTCACAGTATGAGTTATGGGACAGAATATCAAGAGATGAATACATGGCCTACGCCGTCAAGGAATGCTATTTCAGTGCAGAGAGAATTCTTCACTCTTTAGTTGATGGTGAAGGGCAGCGTTGGGTTGAAAGGCTTTTTCGGGATCTGAATGAAAGTATAGCACAAGGTTCACTTTTAGTGACCATAAATCTCAAGAAGCTGCAATTAGTCCAGTCGAGGCTTACTGGTTTGACAGGACTTCTGATACGCGATGAAACTGCTGATCGTGCAGCTGGTGTTACAAAAGCT CTCCGTGAGCTTTATGAGGTTGTTACCCATGAGTTTCTGGCACCGAACC                  ]
[+] EMBL OSS1124A             [TATGATGCCAAGTAACTGTGGCAATCTAAGACTTGTACAGTGGCCATTGTTTCTTCTGACTAGCAAGATTATGTTGGCGAATGACTATGCTTCAGATTGTAAAGACTCACAGTATGAGTTATGGGACAGAATATCAAGAGATGAATACATGGCCTACGNCGTCAAGGAATGCTATTTCAGTGCAGAGAGAA                                                                                                                                                                                                                                                                               ]
[+] EMBL D42924               [                                                                                                                    AGTTATGGGACAGAATATCAAGAGATGAATACATGGCCTACGCCGTCAAGGAATGCTATTTCAGTGCAGAGAGAATTCTTCACTCTTTAGTTGATGGTGAAGGGCAGCGTTGGGTTGAAAGGCTTTTTCGGGATCTGAATGAAAGTATAGCACAAGGTTCACTTTTAGTGACCATAAATCTCAAGAAGCTGCAATTAGTCCANTCGAGGCTTACTGGTCTGACAGGACTTCTGATACGCGCTGAAACTNCTGATCGTGCAGCTGGTGTTACAAAAGNTCCTNCGTGAGCTTTATGNGNTTTGTACCCATCAGTTTCTGGNACCGAANCCGAAGGGNCCNCNTGGTA]




>consensus_5667#0
TATGATGCCAAGTAACTGTGGCAATCTAAGACTTGTACAGTGGCCATTGTTTCTTCTGAC
TAGCAAGATTATGTTGGCGAATGACTATGCTTCAGATTGTAAAGACTCACAGTATGAGTT
ATGGGACAGAATATCAAGAGATGAATACATGGCCTACGCCGTCAAGGAATGCTATTTCAG
TGCAGAGAGAATTCTTCACTCTTTAGTTGATGGTGAAGGGCAGCGTTGGGTTGAAAGGCT
TTTTCGGGATCTGAATGAAAGTATAGCACAAGGTTCACTTTTAGTGACCATAAATCTCAA
GAAGCTGCAATTAGTCCAGTCGAGGCTTACTGGTTTGACAGGACTTCTGATACGCGATGA
AACTGCTGATCGTGCAGCTGGTGTTACAAAAGCTCTCCGTGAGCTTTATGAGGTTGTTAC
CCATGAGTTTCTGGCACCGAACCCGAAGGGNCCNCNTGGTA

clustalw multiple alignements is not computed in this case