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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5676#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 3835 fasta sequence
[GACGGTGGATTCGGCGAGACGTGTTGGACTCGCAGGTTGTCGAACTCCCTCTTCCGCTCCGCCGCAACCACTCCCGTCTCCATCCTTCCCAAACCGCGCCGCCTCTCCCCGTCCCTCCTCCTGCGCCCCAGGTGCAGCCGCAACGGCGACGAACGTTAACGCGGCCGCCGGCGGTGGGGGTATCCGCCGAGACTCAGTGACCGCGGCGCCGCAGCTTCAGGGCAACAAGGAATCTGTGGAATTCAATTTTTCTGCGGGATATCGGCAAGGGAGGGGATTAATTGATTGATTGGTCGATGGAGGAGGCTTCTGTTACAGGGGAATTGTTGGAGCAAGAAGCTCCATCTTCTTCAATCTCCGGTGTCGATTGGTCCCAGCTTCCGGCGGACTTGCTCGTCTGCATCTTCGGCGTGCTGGAGGTCCCGGATGTCTTCAGCTCCGGTGTGGTTTGCCGCGCCTGGCATGCCAGCTTTCTGGAGGCCCGCCGCCTTGGCATTTGCTCCAGTAACCCTGGGCCCTGCCTCGTGTTCTCTTCCGGCGACCGTGATCCTAGCGTGGTCACCCTGCACAGCCTCACCACGGGGAAGAACTACTATGTAACCATGCCGGACCCTCCTTTCCGTACCCGCTACATCGTTGGGTCTTCCCATGGCTGGCTTATTACCGCCGATGAGCGGTCCAATCTGCTCCTTGTCAATCCTGCGACTCAGGCTCAGATCCCCATGCCACCACCGGAGACAATAGCGAATGTCAGGATACGTTGCAATGGTGAGGGAGTGCCACATGGCTATGATCTTTTTAAATTGGATATGTCATCACAAGATTTTGATACTGAAACAGAGCCAGATGATCTTTCCTGGGAAGAAGGCCGGTTTTACTTCTACACGAGGGTTGTCCTGTCAGCAGATCCATCCAGTGGAAACTGCACTGTAATGATCCTGCACTTGCTACGTAATCTCCTTTTCTTTGCAAGGGTGGGTGACACTCATTGGACCTGGATCAATGTTAATGAGCTATGTTGGAACTATCATGATGTTTTGTACAATGACGATGATAGATTGTTCTATGCAATCCGAGGCAATGGTGATGTTCATGCTATCAATACAAATGGACCCTCTCCAATATTAAGGGTTGTCTTAGACGCCAAGAGCTCACTTGTCGATTGTGCCAAGTACATTGTTCTGTCAGAATTGGGTGGTCTTCTTCAAGTATGGAGGTATCATCACTATGTTAATAATAATAAGGAGAGGAGGACCAGTGAATTGGTTGTTTATAAGGTTGATCTTGTTGAACACAAGCTTGTTGAACTTAAGGATTTTGAAGACCATGCATTGTTTATTGGTTTCAATAGCTCCTTCTTCCTACGAGAAGAAGATTTCCCCATGTTGACTCCAAATAGTGTCTACTGTACAGATGATACAGTTACTTATATTTGTCATTCAAGGTTTGGCTTTCGAGAGGTTAGTGCCTTCCATTTGGAAGATAGTAGTTTCACCGATCTACTACCTATTGGCTCACGGTTGAATTGGCCACCTCCTGTTTGGTTTAGGCCATCATTTTCTAAAGGTCCACTATGACATGATTCTGCAGATTGATTGATCTGATCAATGGAGCAGGTTTCTTCTTCTGTTACCGGTGAATTACTAGAGCATGAAGCTCCACCTTCGACCCCCGGTCTTGATTGGTCCCAGCTTCCTGCGGACCTTCTCATCTGCATCCTTGGCACGCTGGAGATTCCAGATATTTTCAGCTCCGGCGTGGTTTGCCGCTCGTGGCATGCCAGCTATCTAGAGGCTTGCCGCCTCGGTATTTGCTCCAATAACCCTGGGCCCTGCCTCGTTTTCTCGTCCAGCGACCGTGATCCTAGCATCACCACACTTCACAGCCTCACCACGGGGAAGGATCACTATGTAACCATGCCGGACCCTCCTTTCCGTACACGTTACATTGTCGGATCCTCCCATGGAGCGGTCTAATCTGCTCCTTGTCAATCATGCGACTCAGGCACAGATCACCATGCCGCCACCGGAGACAATAGCAAATGTCAGGATACGTTGCAATGGTGAGGGTGTGCCAGATGGCTATGATCTTTTTACAATGGATATGTCATCACGGGATTTTGATACTGAAACAGAGCCGAATGATCTTTCCTGGGAAGAAGGCCGATTTTATTTCTATAAGAGGGTTGTTCTGACAGCAGATCCATCCAGTAGAAACTGCACAGTAATGATCCTGCACCTGCTAGATGATTTCCTTTCCTATGCAAGGGTGGGTGACAATCATTGGACCTGGATCGATGTTGATGAGCTATGTTGCTGCTATCATGATGTTTTGTACAAGGACGACGATAGATTGTTCTCTGCAATCCGAGCCACTGGTGATGTTCATGCTATTGATACCAATGGACCCTCTCCAATGTTACGGGTCGTCCTAGACACCAAGAATTCACTCATCAATAATACCAAGTATATTGTTCTGTCAGAATCAGGTGATCTTCAAGTATGGAGGTATTATAAACACGTCAATAACGACAGGAGGACCAGAGAATTGATTGTCTATAAGGTTGACCTTGGTGAACAAAAGCTTGCTGAACTTAAGGATTTTGATGGTCGTGCGCTATTTATTGGTTTCAATAGCTCGTTCTTCCTACGGGTAGAAGATTTCCCAATGTTAGCTCCAAATAGTGTCTACTGTACAGATGATTCAATGGAATATATTTATTGTGTGAGGTTTGGTTTCCGAGAGGTTGGTGCCTTCCATTTGGATGATAGTAGCTTCACTGATCAGCTTATTGGCTCACGGTTGAATTGGCCATCTCCTATTTGGTTTTGGCCATCATTTACTAAAGTTAATTAGATTTATTGCTTCAAGTTTTACATATTTCAATTTGTTTACATCTCTGTAATTTGCTATTGCATACCCTATTAATAATAGAACTCTGGTGGTAGTTTACAAGTTAGTATATGTAATGCTGCTACTGCCTAACAATATAGTTGGAAATGTAACAGATGCATTACTGAAATCATGGAAATCACTACAAACTATGTATAAAAAATTTAAAATATTGTCAACACAACATATGCAATGGAGGTGCTATAATACGCCATGTATTTTTTTTTAAAAATCGAACTTGATTCTCTTTAGAAGGGTTGAAACTCAGAAAGAAATAAAGGAATAATACTAAAATGTTCCAACTTCACTTTATTCTGTCAACACTATTCATGTTTCTGTTTTTTAATTATATGTATTCTATTCCAAACAACACTGAGCATTATCTTCAAATTTTTACATGTGTGTATATAATAGTATGTCCTTCTACTTAAGTTAACTTTTTGAGAATTTTCTTAGAATGTTTACATGGTTTATTGCGAGGTCTCCATGATTCACTGAATTTGTGGTTTTCACCTATAATCCCCTGCTATATGAATATGTTATTATCCGTCTAAGGTGGCATCTCTAAAATTAATATATACCTCCCAACTATTTATTTGATTGTTACAAAGATTATGCAAAATGGAGACACAGAACTTTTTATTTAAACCGTGACCTTTGTTTATACATCCACTTAGATCCATTAACATTGTAGTATTTCCATAGTGTTCTAGACCAATCTTTTGATTTTTAAACTTGTTTCCGCAGCATCACATTCAGTTTCTCAAATAAAGTCAGACTCATGGTGATGCCTTTTGATTGGTTTTCAGGTCATCTTTCTAGTAATTCTGGAGATTGAGTCATGAATACATTAATTTAGCGTGGATATCTGTACGGTCTTGCTCTAGAATAATTTGTAAACAGTGGCGCGCTACCTTGTGTTATCGTCATGTTCAACAATAAT]
[+] EMBL AK071771 [GACGGTGGATTCGGCGAGACGTGTTGGACTCGCAGGTTGTCGAACTCCCTCTTCCGCTCCGCCGCAACCACTCCCGTCTCCATCCTTCCCAAACCGCGCCGCCTCTCCCCGTCCCTCCTCCTGCGCCCCAGGTGCAGCCGCAACGGCGACGAACGTTAACGCGGCCGCCGGCGGTGGGGGTATCCGCCGAGACTCAGTGACCGCGGCGCCGCAGCTTCAGGGCAACAAGGAATCTGTGGAATTCAATTTTTCTGCGGGATATCGGCAAGGGAGGGGATTAATTGATTGATTGGTCGATGGAGGAGGCTTCTGTTACAGGGGAATTGTTGGAGCAAGAAGCTCCATCTTCTTCAATCTCCGGTGTCGATTGGTCCCAGCTTCCGGCGGACTTGCTCGTCTGCATCTTCGGCGTGCTGGAGGTCCCGGATGTCTTCAGCTCCGGTGTGGTTTGCCGCGCCTGGCATGCCAGCTTTCTGGAGGCCCGCCGCCTTGGCATTTGCTCCAGTAACCCTGGGCCCTGCCTCGTGTTCTCTTCCGGCGACCGTGATCCTAGCGTGGTCACCCTGCACAGCCTCACCACGGGGAAGAACTACTATGTAACCATGCCGGACCCTCCTTTCCGTACCCGCTACATCGTTGGGTCTTCCCATGGCTGGCTTATTACCGCCGATGAGCGGTCCAATCTGCTCCTTGTCAATCCTGCGACTCAGGCTCAGATCCCCATGCCACCACCGGAGACAATAGCGAATGTCAGGATACGTTGCAATGGTGAGGGAGTGCCACATGGCTATGATCTTTTTAAATTGGATATGTCATCACAAGATTTTGATACTGAAACAGAGCCAGATGATCTTTCCTGGGAAGAAGGCCGGTTTTACTTCTACACGAGGGTTGTCCTGTCAGCAGATCCATCCAGTGGAAACTGCACTGTAATGATCCTGCACTTGCTACGTAATCTCCTTTTCTTTGCAAGGGTGGGTGACACTCATTGGACCTGGATCAATGTTAATGAGCTATGTTGGAACTATCATGATGTTTTGTACAATGACGATGATAGATTGTTCTATGCAATCCGAGGCAATGGTGATGTTCATGCTATCAATACAAATGGACCCTCTCCAATATTAAGGGTTGTCTTAGACGCCAAGAGCTCACTTGTCGATTGTGCCAAGTACATTGTTCTGTCAGAATTGGGTGGTCTTCTTCAAGTATGGAGGTATCATCACTATGTTAATAATAATAAGGAGAGGAGGACCAGTGAATTGGTTGTTTATAAGGTTGATCTTGTTGAACACAAGCTTGTTGAACTTAAGGATTTTGAAGACCATGCATTGTTTATTGGTTTCAATAGCTCCTTCTTCCTACGAGAAGAAGATTTCCCCATGTTGACTCCAAATAGTGTCTACTGTACAGATGATACAGTTACTTATATTTGTCATTCAAGGTTTGGCTTTCGAGAGGTTAGTGCCTTCCATTTGGAAGATAGTAGTTTCACCGATCTACTACCTATTGGCTCACGGTTGAATTGGCCACCTCCTGTTTGGTTTAGGCCATCATTTTCTAAAGGTCCACTATGACATGATTCTGCAGATTGATTGATCTGATCAATGGAGCAGGTTTCTTCTTCTGTTACCGGTGAATTACTAGAGCATGAAGCTCCACCTTCGACCCCCGGTCTTGATTGGTCCCAGCTTCCTGCGGACCTTCTCATCTGCATCCTTGGCACGCTGGAGATTCCAGATATTTTCAGCTCCGGCGTGGTTTGCCGCTCGTGGCATGCCAGCTATCTAGAGGCTTGCCGCCTCGGTATTTGCTCCAATAACCCTGGGCCCTGCCTCGTTTTCTCGTCCAGCGACCGTGATCCTAGCATCACCACACTTCACAGCCTCACCACGGGGAAGGATCACTATGTAACCATGCCGGACCCTCCTTTCCGTACACGTTACATTGTCGGATCCTCCCATGGAGCGGTCTAATCTGCTCCTTGTCAATCATGCGACTCAGGCACAGATCACCATGCCGCCACCGGAGACAATAGCAAATGTCAGGATACGTTGCAATGGTGAGGGTGTGCCAGATGGCTATGATCTTTTTACAATGGATATGTCATCACGGGATTTTGATACTGAAACAGAGCCGAATGATCTTTCCTGGGAAGAAGGCCGATTTTATTTCTATAAGAGGGTTGTTCTGACAGCAGATCCATCCAGTAGAAACTGCACAGTAATGATCCTGCACCTGCTAGATGATTTCCTTTCCTATGCAAGGGTGGGTGACAATCATTGGACCTGGATCGATGTTGATGAGCTATGTTGCTGCTATCATGATGTTTTGTACAAGGACGACGATAGATTGTTCTCTGCAATCCGAGCCACTGGTGATGTTCATGCTATTGATACCAATGGACCCTCTCCAATGTTACGGGTCGTCCTAGACACCAAGAATTCACTCATCAATAATACCAAGTATATTGTTCTGTCAGAATCAGGTGATCTTCAAGTATGGAGGTATTATAAACACGTCAATAACGACAGGAGGACCAGAGAATTGATTGTCTATAAGGTTGACCTTGGTGAACAAAAGCTTGCTGAACTTAAGGATTTTGATGGTCGTGCGCTATTTATTGGTTTCAATAGCTCGTTCTTCCTACGGGTAGAAGATTTCCCAATGTTAGCTCCAAATAGTGTCTACTGTACAGATGATTCAATGGAATATATTTATTGTGTGAGGTTTGGTTTCCGAGAGGTTGGTGCCTTCCATTTGGATGATAGTAGCTTCACTGATCAGCTTATTGGCTCACGGTTGAATTGGCCATCTCCTATTTGGTTTTGGCCATCATTTACTAAAGTTAATTAGATTTATTGCTTCAAGTTTTACATATTTCAATTTGTTTACATCTCTGTAATTTGCTATTGCATACCCTATTAATAATAGAACTCTGGTGGTAGTTTACAAGTTAGTATATGTAATGCTGCTACTGCCTAACAATATAGTTGGAAATGTAACAGATGCATTACTGAAATCATGGAAATCACTACAAACTATGTATAAAAAATTTAAAATATTGTCAACACAACATATGCAATGGAGGTGCTATAATACGCCATGTATTTTTTTTTAAAAATCGAACTTGATTCTCTTTAGAAGGGTTGAAACTCAGAAAGAAATAAAGGAATAATACTAAAATGTTCCAACTTCACTTTATTCTGTCAACACTATTCATGTTTCTGTTTTTTAATTATATGTATTCTATTCCAAACAACACTGAGCATTATCTTCAAATTTTTACATGTGTGTATATAATAGTATGTCCTTCTACTTAAGTTAACTTTTTGAGAATTTTCTTAGAATGTTTACATGGTTTATTGCGAGGTCTCCATGATTCACTGAATTTGTGGTTTTCACCTATAATCCCCTGCTATATGAATATGTTATTATCCGTCTAAGGTGGCATCTCTAAAATTAATATATACCTCCCAACTATTTATTTGATTGTTACAAAGATTATGCAAAATGGAGACACAGAACTTTTTATTTAAACCGTGACCTTTGTTTATACATCCACTTAGATCCATTAACATTGTAGTATTTCCATAGTGTTCTAGACCAATCTTTTGATTTTTAAACTTGTTTCCGCAGCATCACATTCAGTTTCTCAAATAAAGTCAGACTCATGGTGATGCCTTTTGATTGGTTTTCAGGTCATCTTTCTAGTAATTCTGGAGATTGAGTCATGAATACATTAATTTAGCGTGGATATCTGTACGGTCTTGCTCTAGAATAATTTGTAAACAGTGGCGCGCTACCTTGTGTTATCGTCATGTTCAACAATAAT]
[+] EMBL AK102126 [ ACCGCGCCGCCTCTCCCCGTCCCTCCTCCTGCGCCCCAGGTGCAGCCGCAACGGCGACGAACGTTAACGCGGCCGCCGGCGGTGGGGGTATCCGCCGAGACTCAGTGACCGCGGCGCCGCAGCTTCAGGGCAACAAGGAATCTGTGGAATTCAATTTTTCTGCGGGATATCGGCAAGGGAGGGGATTAATTGATTGATTGGTCGATGGAGGAGGCTTCTGTTACAGGGGAATTGTTGGAGCAAGAAGCTCCATCTTCTTCAATCTCCGGTGTCGATTGGTCCCAGCTTCCGGCGGACTTGCTCGTCTGCATCTTCGGCGTGCTGGAGGTCCCGGATGTCTTCAGCTCCGGTGTGGTTTGCCGCGCCTGGCATGCCAGCTTTCTGGAGGCCCGCCGCCTTGGCATTTGCTCCAGTAACCCTGGGCCCTGCCTCGTGTTCTCTTCCGGCGACCGTGATCCTAGCGTGGTCACCCTGCACAGCCTCACCACGGGGAAGAACTACTATGTAACCATGCCGGACCCTCCTTTCCGTACCCGCTACATCGTTGGGTCTTCCCATGGCTGGCTTATTACCGCCGATGAGCGGTCCAATCTGCTCCTTGTCAATCCTGCGACTCAGGCTCAGATCCCCATGCCACCACCGGAGACAATAGCGAATGTCAGGATACGTTGCAATGGTGAGGGAGTGCCACATGGCTATGATCTTTTTAAATTGGATATGTCATCACAAGATTTTGATACTGAAACAGAGCCAGATGATCTTTCCTGGGAAGAAGGCCGGTTTTACTTCTACACGAGGGTTGTCCTGTCAGCAGATCCATCCAGTGGAAACTGCACTGTAATGATCCTGCACTTGCTACGTAATCTCCTTTTCTTTGCAAGGGTGGGTGACACTCATTGGACCTGGATCAATGTTAATGAGCTATGTTGGAACTATCATGATGTTTTGTACAATGACGATGATAGATTGTTCTATGCAATCCGAGGCAATGGTGATGTTCATGCTATCAATACAAATGGACCCTCTCCAATATTAAGGGTTGTCTTAGACGCCAAGAGCTCACTTGTCGATTGTGCCAAGTACATTGTTCTGTCAGAATTGGGTGGTCTTCTTCAAGTATGGAGGTATCATCACTATGTTAATAATAATAAGGAGAGGAGGACCAGTGAATTGGTTGTTTATAAGGTTGATCTTGTTGAACACAAGCTTGTTGAACTTAAGGATTTTGAAGGCCATGCATTGTTTATTGGTTTCAATAGCTCCTTCTTCCTACGAGAAGAAGATTTCCCCATGTTGACTCCAAATAGTGTCTACTGTACAGATGATACAGTTACTTATATTTGTCATTCAAGGTTTGGCTTTCGAGAGGTTAGTGCCTTCCATTTGGAAGATAGTAGTTTCACCGATCTACTACCTATTGGCTCACGGTTGAATTGGCCACCTCCTGTTTGGTTTAGGCCATCATTTTCTAAAGGTCCACTATGACATAATTCTGCAGATTGATTGATCTGATCAATGGAGCAGGTTTCTTCTTCTGTTACCGGTGAATTACTAGAGCATGAAGCTCCACCTTCGACCCCCGGTCTTGATTGGTCCCAGCTTCCTGCGGACCTTCTCATCTGCATCCTTGGCACGCTGGAGATTCCAGATATTTTCAGCTCCGGCGTGGTTTGCCGCTCGTGGCATGCCAGCTATCTAGAGGCTTGCCGCCTCGGTATTTGCTCCAATAACCCTGGGCCCTGCCTCGTTTTCTCGTCCAGCGACCGTGATCCTAGCATCACCACACTTCACAGCCTCACCACGGGGAAGGATCACTATGTAACCATGCCGGACCCTCCTTTCCGTACACGTTACATTGTCGGATCCTCCCATGGAGCGGTCTAATCTGCTCCTTGTCAATCATGCGACTCAGGCACAGATCACCATGCCGCCACCGGAGACAATAGCAAATGTCAGGATACGTTGCAATGGTGAGGGTGTGCCAGATGGCTATGATCTTTTTACAATGGATATGTCATCACGGGATTTTGATACTGAAACAGAGCCGAATGATCTTTCCTGGGAAGAAGGCCGATTTTATTTCTATAAGAGGGTTGTTCTGACAGCAGATCCATCCAGTAGAAACTGCACAGTAATGATCCTGCACCTGCTAGATGATTTCCTTTCCTATGCAAGGGTGGGTGACAATCATTGGACCTGGATCGATGTTGATGAGCTATGTTGCTGCTATCATGATGTTTTGTACAAGGACGACGATAGATTGTTCTCTGCAATCCGAGCCACTGGTGATGTTCATGCTATTGATACCAATGGACCCTCTCCAATGTTACGGGTCGTCCTAGACACCAAGAATTCACTCATCAATAATACCAAGTATATTGTTCTGTCAGAATCAGGTGATCTTCAAGTATGGAGGTATTATAAACACGTCAATAACGACAGGAGGACCAGAGAATTGATTGTCTATAAGGTTGACCTTGGTGAACAAAAGCTTGCTGAACTTAAGGATTTTGATGGTCGTGCGCTATTTATTGGTTTCAATAGCTCGTTCTTCCTACGGGTAGAAGATTTCCCAATGTTAGCTCCAAATAGTGTCTACTGTACAGATGATTCAATGGAATATATTTATTGTGTGAG ]
consensusID : consensus_5676#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1576 fasta sequence
[TCCATCCTTCCCAAACCGCGCCGCCTCTCCCCGTCCCTCCTCCTGCGCCCCAGGTGCAGCCGCAACGGCGACGAACGTTAACGCGGCCGCCGGCGGTGGGGGTATCCGCCGAGACTCAGTGACCGCGGCGCCGCAGCTTCAGGGCAACAAGGAATCTGTGGAATTCAATTTTTCTGCGGGATATCGGCAAGGGAGGGGATTAATTGATTGATTGGTCGATGGAGGAGGCTTCTGTTACAGGGGAATTGTTGGAGCAAGAAGCTCCATCTTCTTCAATCTCCGGTGTCGATTGGTCCCAGCTTCCGGCGGACTTGCTCGTCTGCATCTTCGGCGTGCTGGAGGTCCCGGATGTCTTCAGCTCCGGTGTGGTTTGCCGCGCCTGGCATGCCAGCTTTCTGGAGGCCCGCCGCCTTGGCATTTGCTCCAGTAACCCTGGGCCCTGCCTCGTGTTCTCTTCCGGCGACCGTGATCCTAGCGTGGTCACCCTGCACAGCCTCACCACGGGGAAGAACTACTATGTAACCATGCCGGACCCTCCTTTCCGTACCCGCTACATCGTTGGGTCTTCCCATGGCTGGCTTATTACCGCCGATGAGCGGTCCAATCTGCTCCTTGTCAATCCTGCGACTCAGGCTCAGATCCCCATGCCACCACCGGAGACAATAGCGAATGTCAGGATACGTTGCAATGGTGAGGGAGTGCCACATGGCTATGATCTTTTTAAATTGGATATGTCATCACAAGATTTTGATACTGAAACAGAGCCGAATGATCTTTCCTGGGAAGAAGGCCGATTTTATTTCTATAAGAGGGTTGTTCTGACAGCAGATCCATCCAGTAGAAACTGCACAGTAATGATCCTGCACCTGCTAGATGATTTCCTTTCCTATGCAAGGGTGGGTGACAATCATTGGACCTGGATCGATGTTGATGAGCTATGTTGCTGCTATCATGATGTTTTGTACAAGGACGACGATAGATTGTTCTCTGCAATCCGAGCCACTGGTGATGTTCATGCTATTGATACCAATGGACCCTCTCCAATGTTACGGGTCGTCCTAGACACCAAGAATTCACTCATCAATAATACCAAGTATATTGTTCTGTCAGAATCAGGTGATCTTCAAGTATGGAGGTATTATAAACACGTCAATAACGACAGGAGGACCAGAGAATTGATTGTCTATAAGGTTGACCTTGGTGAACAAAAGCTTGCTGAACTTAAGGATTTTGATGGTCGTGCGCTATTTATTGGTTTCAATAGCTCGTTCTTCCTACGGGTAGAAGATTTCCCAATGTTAGCTCCAAATAGTGTCTACTGTACAGATGATTCAATGGAATATATTTATTGTGTGAGGTTTGGTTTCCGAGAGGTTGGTGCCTTCCATTTGGATGATAGTAGCTTCACTGATCAGCTTATTGGCTCACGGTTGAATTGGCCATCTCCTATTTGGTTTTGGCCATCATTTACTAAAGTTAATTAGATTTATTGCTTCAAGTTTTACATATTTCAATTTGTTTACATCTCTGTAATTTGCTATTGCATACCCTATTAATAATAGAACTCTGGTGGTAG]
[+] EMBL AK064025 [TCCATCCTTCCCAAACCGCGCCGCCTCTCCCCGTCCCTCCTCCTGCGCCCCAGGTGCAGCCGCAACGGCGACGAACGTTAACGCGGCCGCCGGCGGTGGGGGTATCCGCCGAGACTCAGTGACCGCGGCGCCGCAGCTTCAGGGCAACAAGGAATCTGTGGAATTCAATTTTTCTGCGGGATATCGGCAAGGGAGGGGATTAATTGATTGATTGGTCGATGGAGGAGGCTTCTGTTACAGGGGAATTGTTGGAGCAAGAAGCTCCATCTTCTTCAATCTCCGGTGTCGATTGGTCCCAGCTTCCGGCGGACTTGCTCGTCTGCATCTTCGGCGTGCTGGAGGTCCCGGATGTCTTCAGCTCCGGTGTGGTTTGCCGCGCCTGGCATGCCAGCTTTCTGGAGGCCCGCCGCCTTGGCATTTGCTCCAGTAACCCTGGGCCCTGCCTCGTGTTCTCTTCCGGCGACCGTGATCCTAGCGTGGTCACCCTGCACAGCCTCACCACGGGGAAGAACTACTATGTAACCATGCCGGACCCTCCTTTCCGTACCCGCTACATCGTTGGGTCTTCCCATGGCTGGCTTATTACCGCCGATGAGCGGTCCAATCTGCTCCTTGTCAATCCTGCGACTCAGGCTCAGATCCCCATGCCACCACCGGAGACAATAGCGAATGTCAGGATACGTTGCAATGGTGAGGGAGTGCCACATGGCTATGATCTTTTTAAATTGGATATGTCATCACAAGATTTTGATACTGAAACAGAGCCGAATGATCTTTCCTGGGAAGAAGGCCGATTTTATTTCTATAAGAGGGTTGTTCTGACAGCAGATCCATCCAGTAGAAACTGCACAGTAATGATCCTGCACCTGCTAGATGATTTCCTTTCCTATGCAAGGGTGGGTGACAATCATTGGACCTGGATCGATGTTGATGAGCTATGTTGCTGCTATCATGATGTTTTGTACAAGGACGACGATAGATTGTTCTCTGCAATCCGAGCCACTGGTGATGTTCATGCTATTGATACCAATGGACCCTCTCCAATGTTACGGGTCGTCCTAGACACCAAGAATTCACTCATCAATAATACCAAGTATATTGTTCTGTCAGAATCAGGTGATCTTCAAGTATGGAGGTATTATAAACACGTCAATAACGACAGGAGGACCAGAGAATTGATTGTCTATAAGGTTGACCTTGGTGAACAAAAGCTTGCTGAACTTAAGGATTTTGATGGTCGTGCGCTATTTATTGGTTTCAATAGCTCGTTCTTCCTACGGGTAGAAGATTTCCCAATGTTAGCTCCAAATAGTGTCTACTGTACAGATGATTCAATGGAATATATTTATTGTGTGAGGTTTGGTTTCCGAGAGGTTGGTGCCTTCCATTTGGATGATAGTAGCTTCACTGATCAGCTTATTGGCTCACGGTTGAATTGGCCATCTCCTATTTGGTTTTGGCCATCATTTACTAAAGTTAATTAGATTTATTGCTTCAAGTTTTACATATTTCAATTTGTTTACATCTCTGTAATTTGCTATTGCATACCCTATTAATAATAGAACTCTGGTGGTAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5676#0 GACGGTGGATTCGGCGAGACGTGTTGGACTCGCAGGTTGTCGAACTCCCTCTTCCGCTCC 60
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 GCCGCAACCACTCCCGTCTCCATCCTTCCCAAACCGCGCCGCCTCTCCCCGTCCCTCCTC 120
consensus_5676#1 ------------------TCCATCCTTCCCAAACCGCGCCGCCTCTCCCCGTCCCTCCTC 42
******************************************
consensus_5676#0 CTGCGCCCCAGGTGCAGCCGCAACGGCGACGAACGTTAACGCGGCCGCCGGCGGTGGGGG 180
consensus_5676#1 CTGCGCCCCAGGTGCAGCCGCAACGGCGACGAACGTTAACGCGGCCGCCGGCGGTGGGGG 102
************************************************************
consensus_5676#0 TATCCGCCGAGACTCAGTGACCGCGGCGCCGCAGCTTCAGGGCAACAAGGAATCTGTGGA 240
consensus_5676#1 TATCCGCCGAGACTCAGTGACCGCGGCGCCGCAGCTTCAGGGCAACAAGGAATCTGTGGA 162
************************************************************
consensus_5676#0 ATTCAATTTTTCTGCGGGATATCGGCAAGGGAGGGGATTAATTGATTGATTGGTCGATGG 300
consensus_5676#1 ATTCAATTTTTCTGCGGGATATCGGCAAGGGAGGGGATTAATTGATTGATTGGTCGATGG 222
************************************************************
consensus_5676#0 AGGAGGCTTCTGTTACAGGGGAATTGTTGGAGCAAGAAGCTCCATCTTCTTCAATCTCCG 360
consensus_5676#1 AGGAGGCTTCTGTTACAGGGGAATTGTTGGAGCAAGAAGCTCCATCTTCTTCAATCTCCG 282
************************************************************
consensus_5676#0 GTGTCGATTGGTCCCAGCTTCCGGCGGACTTGCTCGTCTGCATCTTCGGCGTGCTGGAGG 420
consensus_5676#1 GTGTCGATTGGTCCCAGCTTCCGGCGGACTTGCTCGTCTGCATCTTCGGCGTGCTGGAGG 342
************************************************************
consensus_5676#0 TCCCGGATGTCTTCAGCTCCGGTGTGGTTTGCCGCGCCTGGCATGCCAGCTTTCTGGAGG 480
consensus_5676#1 TCCCGGATGTCTTCAGCTCCGGTGTGGTTTGCCGCGCCTGGCATGCCAGCTTTCTGGAGG 402
************************************************************
consensus_5676#0 CCCGCCGCCTTGGCATTTGCTCCAGTAACCCTGGGCCCTGCCTCGTGTTCTCTTCCGGCG 540
consensus_5676#1 CCCGCCGCCTTGGCATTTGCTCCAGTAACCCTGGGCCCTGCCTCGTGTTCTCTTCCGGCG 462
************************************************************
consensus_5676#0 ACCGTGATCCTAGCGTGGTCACCCTGCACAGCCTCACCACGGGGAAGAACTACTATGTAA 600
consensus_5676#1 ACCGTGATCCTAGCGTGGTCACCCTGCACAGCCTCACCACGGGGAAGAACTACTATGTAA 522
************************************************************
consensus_5676#0 CCATGCCGGACCCTCCTTTCCGTACCCGCTACATCGTTGGGTCTTCCCATGGCTGGCTTA 660
consensus_5676#1 CCATGCCGGACCCTCCTTTCCGTACCCGCTACATCGTTGGGTCTTCCCATGGCTGGCTTA 582
************************************************************
consensus_5676#0 TTACCGCCGATGAGCGGTCCAATCTGCTCCTTGTCAATCCTGCGACTCAGGCTCAGATCC 720
consensus_5676#1 TTACCGCCGATGAGCGGTCCAATCTGCTCCTTGTCAATCCTGCGACTCAGGCTCAGATCC 642
************************************************************
consensus_5676#0 CCATGCCACCACCGGAGACAATAGCGAATGTCAGGATACGTTGCAATGGTGAGGGAGTGC 780
consensus_5676#1 CCATGCCACCACCGGAGACAATAGCGAATGTCAGGATACGTTGCAATGGTGAGGGAGTGC 702
************************************************************
consensus_5676#0 CACATGGCTATGATCTTTTTAAATTGGATATGTCATCACAAGATTTTGATACTGAAACAG 840
consensus_5676#1 CACATGGCTATGATCTTTTTAAATTGGATATGTCATCACAAGATTTTGATACTGAAACAG 762
************************************************************
consensus_5676#0 AGCCAGATGATCTTTCCTGGGAAGAAGGCCGGTTTTACTTCTACACGAGGGTTGTCCTGT 900
consensus_5676#1 AGCCGAATGATCTTTCCTGGGAAGAAGGCCGATTTTATTTCTATAAGAGGGTTGTTCTGA 822
**** ************************* ***** ***** * ********* ***
consensus_5676#0 CAGCAGATCCATCCAGTGGAAACTGCACTGTAATGATCCTGCACTTGCTACGTAATCTCC 960
consensus_5676#1 CAGCAGATCCATCCAGTAGAAACTGCACAGTAATGATCCTGCACCTGCTAGATGATTTCC 882
***************** ********** *************** ***** * ** ***
consensus_5676#0 TTTTCTTTGCAAGGGTGGGTGACACTCATTGGACCTGGATCAATGTTAATGAGCTATGTT 1020
consensus_5676#1 TTTCCTATGCAAGGGTGGGTGACAATCATTGGACCTGGATCGATGTTGATGAGCTATGTT 942
*** ** ***************** **************** ***** ************
consensus_5676#0 GGAACTATCATGATGTTTTGTACAATGACGATGATAGATTGTTCTATGCAATCCGAGGCA 1080
consensus_5676#1 GCTGCTATCATGATGTTTTGTACAAGGACGACGATAGATTGTTCTCTGCAATCCGAGCCA 1002
* ********************* ***** ************* *********** **
consensus_5676#0 ATGGTGATGTTCATGCTATCAATACAAATGGACCCTCTCCAATATTAAGGGTTGTCTTAG 1140
consensus_5676#1 CTGGTGATGTTCATGCTATTGATACCAATGGACCCTCTCCAATGTTACGGGTCGTCCTAG 1062
****************** **** ***************** *** **** *** ***
consensus_5676#0 ACGCCAAGAGCTCACTTGTCGATTGTGCCAAGTACATTGTTCTGTCAGAATTGGGTGGTC 1200
consensus_5676#1 ACACCAAGAATTCACTCATCAATAATACCAAGTATATTGTTCTGTCAGAATCAGGTGATC 1122
** ****** ***** ** ** * ******* **************** **** **
consensus_5676#0 TTCTTCAAGTATGGAGGTATCATCACTATGTTAATAATAATAAGGAGAGGAGGACCAGTG 1260
consensus_5676#1 T---TCAAGTATGGAGGTATTATAAACACGTCAATAACGACA------GGAGGACCAGAG 1173
* **************** ** * * ** ***** * * ********** *
consensus_5676#0 AATTGGTTGTTTATAAGGTTGATCTTGTTGAACACAAGCTTGTTGAACTTAAGGATTTTG 1320
consensus_5676#1 AATTGATTGTCTATAAGGTTGACCTTGGTGAACAAAAGCTTGCTGAACTTAAGGATTTTG 1233
***** **** *********** **** ****** ******* *****************
consensus_5676#0 AAGACCATGCATTGTTTATTGGTTTCAATAGCTCCTTCTTCCTACGAGAAGAAGATTTCC 1380
consensus_5676#1 ATGGTCGTGCGCTATTTATTGGTTTCAATAGCTCGTTCTTCCTACGGGTAGAAGATTTCC 1293
* * * *** * ******************** *********** * ***********
consensus_5676#0 CCATGTTGACTCCAAATAGTGTCTACTGTACAGATGATACAGTTACTTATATTTGTCATT 1440
consensus_5676#1 CAATGTTAGCTCCAAATAGTGTCTACTGTACAGATGATTCAATGGAATATATTTATTGTG 1353
* ***** ***************************** ** * ******* * *
consensus_5676#0 CAAGGTTTGGCTTTCGAGAGGTTAGTGCCTTCCATTTGGAAGATAGTAGTTTCACCGATC 1500
consensus_5676#1 TGAGGTTTGGTTTCCGAGAGGTTGGTGCCTTCCATTTGGATGATAGTAGCTTCACTGATC 1413
******** ** ********* **************** ******** ***** ****
consensus_5676#0 TACTACCTATTGGCTCACGGTTGAATTGGCCACCTCCTGTTTGGTTTAGGCCATCATTTT 1560
consensus_5676#1 AGCT---TATTGGCTCACGGTTGAATTGGCCATCTCCTATTTGGTTTTGGCCATCATTTA 1470
** ************************* ***** ******** ***********
consensus_5676#0 CTAAAGGTCCACTATGACATGATTCTGCAGATTGATTGATCTGATCAATGGAGCAGGTTT 1620
consensus_5676#1 CTAAAG-TTAATTA-GATTTATTGCTTCAAGTTT-TACATATTTCAATTTGTTTACATCT 1527
****** * * ** ** * * ** ** ** * ** * * * * * * *
consensus_5676#0 CT-TCTTCTGTTACCGGTGAATTACTAGAGCATGAAGCTCCACCTTCGACCCCCGGTCTT 1679
consensus_5676#1 CTGTAATTTGCTATTGCATACCCTATTAATAATAGAACTCTGGTGGTAG----------- 1576
** * * ** ** * * * * ** * ***
consensus_5676#0 GATTGGTCCCAGCTTCCTGCGGACCTTCTCATCTGCATCCTTGGCACGCTGGAGATTCCA 1739
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 GATATTTTCAGCTCCGGCGTGGTTTGCCGCTCGTGGCATGCCAGCTATCTAGAGGCTTGC 1799
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 CGCCTCGGTATTTGCTCCAATAACCCTGGGCCCTGCCTCGTTTTCTCGTCCAGCGACCGT 1859
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 GATCCTAGCATCACCACACTTCACAGCCTCACCACGGGGAAGGATCACTATGTAACCATG 1919
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 CCGGACCCTCCTTTCCGTACACGTTACATTGTCGGATCCTCCCATGGAGCGGTCTAATCT 1979
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 GCTCCTTGTCAATCATGCGACTCAGGCACAGATCACCATGCCGCCACCGGAGACAATAGC 2039
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 AAATGTCAGGATACGTTGCAATGGTGAGGGTGTGCCAGATGGCTATGATCTTTTTACAAT 2099
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 GGATATGTCATCACGGGATTTTGATACTGAAACAGAGCCGAATGATCTTTCCTGGGAAGA 2159
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 AGGCCGATTTTATTTCTATAAGAGGGTTGTTCTGACAGCAGATCCATCCAGTAGAAACTG 2219
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 CACAGTAATGATCCTGCACCTGCTAGATGATTTCCTTTCCTATGCAAGGGTGGGTGACAA 2279
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 TCATTGGACCTGGATCGATGTTGATGAGCTATGTTGCTGCTATCATGATGTTTTGTACAA 2339
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 GGACGACGATAGATTGTTCTCTGCAATCCGAGCCACTGGTGATGTTCATGCTATTGATAC 2399
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 CAATGGACCCTCTCCAATGTTACGGGTCGTCCTAGACACCAAGAATTCACTCATCAATAA 2459
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 TACCAAGTATATTGTTCTGTCAGAATCAGGTGATCTTCAAGTATGGAGGTATTATAAACA 2519
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 CGTCAATAACGACAGGAGGACCAGAGAATTGATTGTCTATAAGGTTGACCTTGGTGAACA 2579
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 AAAGCTTGCTGAACTTAAGGATTTTGATGGTCGTGCGCTATTTATTGGTTTCAATAGCTC 2639
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 GTTCTTCCTACGGGTAGAAGATTTCCCAATGTTAGCTCCAAATAGTGTCTACTGTACAGA 2699
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 TGATTCAATGGAATATATTTATTGTGTGAGGTTTGGTTTCCGAGAGGTTGGTGCCTTCCA 2759
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 TTTGGATGATAGTAGCTTCACTGATCAGCTTATTGGCTCACGGTTGAATTGGCCATCTCC 2819
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 TATTTGGTTTTGGCCATCATTTACTAAAGTTAATTAGATTTATTGCTTCAAGTTTTACAT 2879
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 ATTTCAATTTGTTTACATCTCTGTAATTTGCTATTGCATACCCTATTAATAATAGAACTC 2939
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 TGGTGGTAGTTTACAAGTTAGTATATGTAATGCTGCTACTGCCTAACAATATAGTTGGAA 2999
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 ATGTAACAGATGCATTACTGAAATCATGGAAATCACTACAAACTATGTATAAAAAATTTA 3059
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 AAATATTGTCAACACAACATATGCAATGGAGGTGCTATAATACGCCATGTATTTTTTTTT 3119
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 AAAAATCGAACTTGATTCTCTTTAGAAGGGTTGAAACTCAGAAAGAAATAAAGGAATAAT 3179
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 ACTAAAATGTTCCAACTTCACTTTATTCTGTCAACACTATTCATGTTTCTGTTTTTTAAT 3239
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 TATATGTATTCTATTCCAAACAACACTGAGCATTATCTTCAAATTTTTACATGTGTGTAT 3299
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 ATAATAGTATGTCCTTCTACTTAAGTTAACTTTTTGAGAATTTTCTTAGAATGTTTACAT 3359
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 GGTTTATTGCGAGGTCTCCATGATTCACTGAATTTGTGGTTTTCACCTATAATCCCCTGC 3419
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 TATATGAATATGTTATTATCCGTCTAAGGTGGCATCTCTAAAATTAATATATACCTCCCA 3479
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 ACTATTTATTTGATTGTTACAAAGATTATGCAAAATGGAGACACAGAACTTTTTATTTAA 3539
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 ACCGTGACCTTTGTTTATACATCCACTTAGATCCATTAACATTGTAGTATTTCCATAGTG 3599
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 TTCTAGACCAATCTTTTGATTTTTAAACTTGTTTCCGCAGCATCACATTCAGTTTCTCAA 3659
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 ATAAAGTCAGACTCATGGTGATGCCTTTTGATTGGTTTTCAGGTCATCTTTCTAGTAATT 3719
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 CTGGAGATTGAGTCATGAATACATTAATTTAGCGTGGATATCTGTACGGTCTTGCTCTAG 3779
consensus_5676#1 ------------------------------------------------------------
consensus_5676#0 AATAATTTGTAAACAGTGGCGCGCTACCTTGTGTTATCGTCATGTTCAACAATAAT 3835
consensus_5676#1 --------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||