cluster # 569

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Oryza sativa
cluster # 569 cluster # 569 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_569#0 length = 2866 sequences # 2
consensusID : consensus_569#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2866
fasta sequence
                              [CACATCACAAGTCTTCCTTCCTTCCTTCCTTGTCGTCTGCTAGTTACTCCATGTCACACTAGTCTCACACAGGAGCAGCAACAAGAAGAGGAAGAATAGGTGGAGGAGGAGGAAGGCCGTTCTTGGTGCTTGTGCAGCAGCTTCTTGCACTCACACTTGTTCTCCAGTGAGGCCATTGATGTTCCTGATGCTCACACAGTCACAAGATCCCCTCCCTCTGGGCTGGTTCATTCATTCAGAGAAGATTTGCTGAGATGTTCTTGTTGGTGTGCTTGAGCTGGTAGCAAGGGCGCCACTGGTTGGTGGCTCCACCTCCCTGCATTCCTGGAATTTCTTGGGATTTCTCCTCCTCTTGAGGCGGTGGTGGTTGCTGAGATGCCGGCCAAGTACTTGCAGATGCTCGGGGAGGAGAGGCGGCCGGAGCTTCACCGGCAGCAGGCGGGGTGCGTCACCGGGATCCTGCAGGCGTTCGACCGCCGGTATCCCCTCGCCGCCCACCATTCCCACAATCGCCTTCTTCCCCCAGCCCATGCACTGTCAAGCAGTCCAAGTGTTGGGGAAGAGCGAACAAGATATTCATCTCAGATTGTTCTTGACAAGAACATGAGTAAAAGCTGGATCGATAATCAAAGAGCACCATTAACAGTGGAGTTGTCGCAAGGATCTTATTCATCGTCGTCTTGTTCTTCGTCGTCCTCCCTTGATGGAAACAGATCAGGACAGCAAGACCTATCCTCCACTGATCGAATGCTATTTCCGGAGAAGCCATTCAAAAGCTCACCGAAGCTCAAGAGCTCTTCTGACAGTGACTGTGGAGTGGATTACTACCTTGATGATGCCCTTGCCAAGCTCTCAGCCCAACCTAGCTACCCAACTCTTGGTATAAGAAATCTCGTAAAGGATTCAATATATAGAGATACTCGTGATTTTTCAATCAGAACTTTCACCAAAGAGGCAGAAAAAGATCACCTATTCAATTGTGGAGATCCGCCTAGAATCTTGAATGAGCCTCCTAACAGTGCTATCCAAGAGAAAAACAAAGGAACCATGGACATTGACGAATCCCTCCGAGTTTTAGCCAAGCTCAGGAATCCATCTGAATCAGTCCAGCAACCAAGGCTATCATATGATGCTCCTCGCTTCTCGTGTGAAGGAAGGGAATCAGCGTCAAAACTTAGGGAGGTGCCAAGATTGTCACTAGACATAAAGGAAAGCCCTCTTAGGAACCGCGAAATCGACGTAAGGCCAAAGCCAAGCATGACTGATGAAGACAGGAGAAGCAGCATCAGTAAAGATTACAGTCCACCCTTGGAGACCCAGCAAGAACACAATGCCTGTAAACGTCTCCCTAGCGTTGTTGCGAAACTCATGGGGTTGGAAGACTTGCCAGAGCATAAGGACAATACTGCGATATCTTCACAGGTATCCAAATCAGTTACAGAGAGGAGTGAAGAACCCACCATGCTGAGGCCTTTGAGCCTTTCTTCCCAAAATGAGGCTACTCCTAGGCAGCAGAGGAATCTAGATGCAACAATCAAGAATGTTCCTAACTCTAAGTTCCCTGTGGAAACTGCACCTTGGAAACAGCAGGAGAAGATTGTGCTACCTAGAAAATTGCCGAAGGGATCAAAGGGAGCTCATGGAAAAGAGCAACATGCTGCATCAGTTTACAGTGAGATAGAGAAACGGCTCAAGGACCTTGATTTTCAGCAATCGAACAAGGATCTCAGGGCACTCAAGCAGATCCTGGACTCGATGCAAGCGAAAGGGTTGTTGCAGAACAAGAAACGTGAGGATCCATCGATGCCGAAGATATATGATGGAGACCATGATAACGGAGATGTGACTGATGTAAACCTGAGACTGAATAGCACCAGCAACACCAAACAGGCACCTGAAGGAACCCCATCATTTACAACGGAAGAAGATAGCACTACAGAAAGAAGCTTCAAATCACCCATTGTAATCATGAAGCCTGCAAAATCTGCAGACCTGTTAAGTGATGTAACCGAGGATTCCGCTGTTGGTCCATTAGGCGGTTTATCAGAGCTACCGCAGCTGAGAACAGCCAATAGTGCTGATAAAAGGAAAAGCTCAAAGAAGGTCACTAGGGAAGCTGTGGAGCAACATACCAAATCTAGTTCAAGGGCACCTACACCTCAACACCTTGCTTCTTTTGACAAGAGAGCAAATGGAAGGAATGAAGAAATTAGCAGGAAACAGAAGTCTACTTCACAGCTGATGACTGAGAACTCAGCTAGGAGACAGCAGATGCAAAGAGAAAATAATGGAAGCTTGCTAAAGCATAAAAATTCCACTAGCCCTAGAGTACAACAGAAAAAACCTGATTCAGAGCGGAGGGCCAGACCGCCAATTCCCTCTCCCGATTCAAGCAAGAATCAAAGGCAATCTGTGGAAAGGAGCCATTTGGATTCAGTATCACCCAGAAGTAAATTTAGAAGAAAACCTGCTCAAGCACAAGGTGAAGATTTCCATCAAAATGGTGTAAGTAGAAGGACAAGGAGCCTGAACCAGGAAGGCAATGATATGTCCGCAAGGTCAGATGGTAGCATAAGTGTTGCATCAGAGCTGGATGTAGAAGTGACAAGTACAGACAGATCTGCAGAAGTTAACATTTTGAGATCTCAGCATGGCACTCAAACACCATCAGGAAGGAATCCTCAAAAAGTGAAAACCTCTTATGATGCAAACAAGGACCTGCCATCTATGGATCCTGCAGCAACTATTACTGAGCGGCCTAGTCCAGTCTCTGTATTGGACTCTTCGTTTGATCAGGAGGAATTTTTCCATACCAGCAAGACCACAAATTCATCTAATGTTGATGATGAGCATCACCCATCACCAT]

[+] EMBL AK070584             [CACATCACAAGTCTTCCTTCCTTCCTTCCTTGTCGTCTGCTAGTTACTCCATGTCACACTAGTCTCACACAGGAGCAGCAACAAGAAGAGGAAGAATAGGTGGAGGAGGAGGAAGGCCGTTCTTGGTGCTTGTGCAGCAGCTTCTTGCACTCACACTTGTTCTCCAGTGAGGCCATTGATGTTCCTGATGCTCACACAGTCACAAGATCCCCTCCCTCTGGGCTGGTTCATTCATTCAGAGAAGATTTGCTGAGATGTTCTTGTTGGTGTGCTTGAGCTGGTAGCAAGGGCGCCACTGGTTGGTGGCTCCACCTCCCTGCATTCCTGGAATTTCTTGGGATTTCTCCTCCTCTTGAGGCGGTGGTGGTTGCTGAGATGCCGGCCAAGTACTTGCAGATGCTCGGGGAGGAGAGGCGGCCGGAGCTTCACCGGCAGCAGGCGGGGTGCGTCACCGGGATCCTGCAGGCGTTCGACCGCCGGTATCCCCTCGCCGCCCACCATTCCCACAATCGCCTTCTTCCCCCAGCCCATGCACTGTCAAGCAGTCCAAGTGTTGGGGAAGAGCGAACAAGATATTCATCTCAGATTGTTCTTGACAAGAACATGAGTAAAAGCTGGATCGATAATCAAAGAGCACCATTAACAGTGGAGTTGTCGCAAGGATCTTATTCATCGTCGTCTTGTTCTTCGTCGTCCTCCCTTGATGGAAACAGATCAGGACAGCAAGACCTATCCTCCACTGATCGAATGCTATTTCCGGAGAAGCCATTCAAAAGCTCACCGAAGCTCAAGAGCTCTTCTGACAGTGACTGTGGAGTGGATTACTACCTTGATGATGCCCTTGCCAAGCTCTCAGCCCAACCTAGCTACCCAACTCTTGGTATAAGAAATCTCGTAAAGGATTCAATATATAGAGATACTCGTGATTTTTCAATCAGAACTTTCACCAAAGAGGCAGAAAAAGATCACCTATTCAATTGTGGAGATCCGCCTAGAATCTTGAATGAGCCTCCTAACAGTGCTATCCAAGAGAAAAACAAAGGAACCATGGACATTGACGAATCCCTCCGAGTTTTAGCCAAGCTCAGGAATCCATCTGAATCAGTCCAGCAACCAAGGCTATCATATGATGCTCCTCGCTTCTCGTGTGAAGGAAGGGAATCAGCGTCAAAACTTAGGGAGGTGCCAAGATTGTCACTAGACATAAAGGAAAGCCCTCTTAGGAACCGCGAAATCGACGTAAGGCCAAAGCCAAGCATGACTGATGAAGACAGGAGAAGCAGCATCAGTAAAGATTACAGTCCACCCTTGGAGACCCAGCAAGAACACAATGCCTGTAAACGTCTCCCTAGCGTTGTTGCGAAACTCATGGGGTTGGAAGACTTGCCAGAGCATAAGGACAATACTGCGATATCTTCACAGGTATCCAAATCAGTTACAGAGAGGAGTGAAGAACCCACCATGCTGAGGCCTTTGAGCCTTTCTTCCCAAAATGAGGCTACTCCTAGGCAGCAGAGGAATCTAGATGCAACAATCAAGAATGTTCCTAACTCTAAGTTCCCTGTGGAAACTGCACCTTGGAAACAGCAGGAGAAGATTGTGCTACCTAGAAAATTGCCGAAGGGATCAAAGGGAGCTCATGGAAAAGAGCAACATGCTGCATCAGTTTACAGTGAGATAGAGAAACGGCTCAAGGACCTTGATTTTCAGCAATCGAACAAGGATCTCAGGGCACTCAAGCAGATCCTGGACTCGATGCAAGCGAAAGGGTTGTTGCAGAACAAGAAACGTGAGGATCCATCGATGCCGAAGATATATGATGGAGACCATGATAACGGAGATGTGACTGATGTAAACCTGAGACTGAATAGCACCAGCAACACCAAACAGGCACCTGAAGGAACCCCATCATTTACAACGGAAGAAGATAGCACTACAGAAAGAAGCTTCAAATCACCCATTGTAATCATGAAGCCTGCAAAATCTGCAGACCTGTTAAGTGATGTAACCGAGGATTCCGCTGTTGGTCCATTAGGCGGTTTATCAGAGCTACCGCAGCTGAGAACAGCCAATAGTGCTGATAAAAGGAAAAGCTCAAAGAAGGTCACTAGGGAAGCTGTGGAGCAACATACCAAATCTAGTTCAAGGGCACCTACACCTCAACACCTTGCTTCTTTTGACAAGAGAGCAAATGGAAGGAATGAAGAAATTAGCAGGAAACAGAAGTCTACTTCACAGCTGATGACTGAGAACTCAGCTAGGAGACAGCAGATGCAAAGAGAAAATAATGGAAGCTTGCTAAAGCATAAAAATTCCACTAGCCCTAGAGTACAACAGAAAAAACCTGATTCAGAGCGGAGGGCCAGACCGCCAATTCCCTCTCCCGATTCAAGCAAGAATCAAAGGCAATCTGTGGAAAGGAGCCATTTGGATTCAGTATCACCCAGAAGTAAATTTAGAAGAAAACCTGCTCAAGCACAAGGTGAAGATTTCCATCAAAATGGTGTAAGTAGAAGGACAAGGAGCCTGAACCAGGAAGGCAATGATATGTCCGCAAGGTCAGATGGTAGCATAAGTGTTGCATCAGAGCTGGATGTAGAAGTGACAAGTACAGACAGATCTGCAGAAGTTAACATTTTGAGATCTCAGCATGGCACTCAAACACCATCAGGAAGGAATCCTCAAAAAGTGAAAACCTCTTATGATGCAAACAAGGACCTGCCATCTATGGATCCTGCAGCAACTATTACTGAGCGGCCTAGTCCAGTCTCTGTATTGGACTCTTCGTTTGATCAGGAGGAATTTTTCCATACCAGCAAGACCACAAATTCATCTAATGTTGATGATGAGCATCACCCATCACCAT]
[+] EMBL CB635870             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCTGACACTGAATAGCACCAGCAACACCAAACAGGCACCTGAAGGAACCCCATCATTTACAACGGAAGAAGAGAGCACTACAGAAAGAAGCTTCAAATCACCCATTGTAATCATGAAGCCTGCAAAATCTGCAGACCTGTTAAGTGATGTAACCGAGGATTCCGCTGTTGGTCCATTAGGCGGTTTATCAGAGCTACCGCAGCTGAGAACAGCCAATAGTGCTGATAAAAGGAAAAGCTCAAAGAAGGTCACTAGGGAAGCTGTGGAGCAACATACCAAATCTAGTTCAAGGGCACCTGCACCTCAACCCCTTGCTTCTTTTGACAAGAGAGCAAATGGAAGGAATGAAGAAATTAGCAGGAAACAGAAGTCTACTTCACAGCTGATGACTGAGAACTCAGCTAGGAGACAGCAGATGCAAAGAGAAAATAATGGAAGCTTGCTAAAGCATAAAAATTCCACTAGCCCTAGAGTACAACAGAAAAAACCTGATTCAGAGCGGAGGGCCAGACCGCCAATTCCCTCTCCCGATTCAAGCAAGAATCAAAGGCAATCTGTGGAAAGGAGCCATTTGGATTCAGTATCACCCAGAAGTAAATTTAGAAGAAAACCTGCTCAAGCACAAGGTGAAGATTTCCATCAAAATGGTGTAAGTAGAAGGACAAGGAGCCTGAACCAGGAAGGCAATGATATGTCCGCAAGGTCAGATGGTAGCATAAGTGTTGCATCAGAGCTGGATGTAGAAGTGACAAGTACAGACAGATCTGCAGAAGTTAACATTTTGAGATCTCA                                                                                                                                                                                                                          ]




>consensus_569#0
CACATCACAAGTCTTCCTTCCTTCCTTCCTTGTCGTCTGCTAGTTACTCCATGTCACACT
AGTCTCACACAGGAGCAGCAACAAGAAGAGGAAGAATAGGTGGAGGAGGAGGAAGGCCGT
TCTTGGTGCTTGTGCAGCAGCTTCTTGCACTCACACTTGTTCTCCAGTGAGGCCATTGAT
GTTCCTGATGCTCACACAGTCACAAGATCCCCTCCCTCTGGGCTGGTTCATTCATTCAGA
GAAGATTTGCTGAGATGTTCTTGTTGGTGTGCTTGAGCTGGTAGCAAGGGCGCCACTGGT
TGGTGGCTCCACCTCCCTGCATTCCTGGAATTTCTTGGGATTTCTCCTCCTCTTGAGGCG
GTGGTGGTTGCTGAGATGCCGGCCAAGTACTTGCAGATGCTCGGGGAGGAGAGGCGGCCG
GAGCTTCACCGGCAGCAGGCGGGGTGCGTCACCGGGATCCTGCAGGCGTTCGACCGCCGG
TATCCCCTCGCCGCCCACCATTCCCACAATCGCCTTCTTCCCCCAGCCCATGCACTGTCA
AGCAGTCCAAGTGTTGGGGAAGAGCGAACAAGATATTCATCTCAGATTGTTCTTGACAAG
AACATGAGTAAAAGCTGGATCGATAATCAAAGAGCACCATTAACAGTGGAGTTGTCGCAA
GGATCTTATTCATCGTCGTCTTGTTCTTCGTCGTCCTCCCTTGATGGAAACAGATCAGGA
CAGCAAGACCTATCCTCCACTGATCGAATGCTATTTCCGGAGAAGCCATTCAAAAGCTCA
CCGAAGCTCAAGAGCTCTTCTGACAGTGACTGTGGAGTGGATTACTACCTTGATGATGCC
CTTGCCAAGCTCTCAGCCCAACCTAGCTACCCAACTCTTGGTATAAGAAATCTCGTAAAG
GATTCAATATATAGAGATACTCGTGATTTTTCAATCAGAACTTTCACCAAAGAGGCAGAA
AAAGATCACCTATTCAATTGTGGAGATCCGCCTAGAATCTTGAATGAGCCTCCTAACAGT
GCTATCCAAGAGAAAAACAAAGGAACCATGGACATTGACGAATCCCTCCGAGTTTTAGCC
AAGCTCAGGAATCCATCTGAATCAGTCCAGCAACCAAGGCTATCATATGATGCTCCTCGC
TTCTCGTGTGAAGGAAGGGAATCAGCGTCAAAACTTAGGGAGGTGCCAAGATTGTCACTA
GACATAAAGGAAAGCCCTCTTAGGAACCGCGAAATCGACGTAAGGCCAAAGCCAAGCATG
ACTGATGAAGACAGGAGAAGCAGCATCAGTAAAGATTACAGTCCACCCTTGGAGACCCAG
CAAGAACACAATGCCTGTAAACGTCTCCCTAGCGTTGTTGCGAAACTCATGGGGTTGGAA
GACTTGCCAGAGCATAAGGACAATACTGCGATATCTTCACAGGTATCCAAATCAGTTACA
GAGAGGAGTGAAGAACCCACCATGCTGAGGCCTTTGAGCCTTTCTTCCCAAAATGAGGCT
ACTCCTAGGCAGCAGAGGAATCTAGATGCAACAATCAAGAATGTTCCTAACTCTAAGTTC
CCTGTGGAAACTGCACCTTGGAAACAGCAGGAGAAGATTGTGCTACCTAGAAAATTGCCG
AAGGGATCAAAGGGAGCTCATGGAAAAGAGCAACATGCTGCATCAGTTTACAGTGAGATA
GAGAAACGGCTCAAGGACCTTGATTTTCAGCAATCGAACAAGGATCTCAGGGCACTCAAG
CAGATCCTGGACTCGATGCAAGCGAAAGGGTTGTTGCAGAACAAGAAACGTGAGGATCCA
TCGATGCCGAAGATATATGATGGAGACCATGATAACGGAGATGTGACTGATGTAAACCTG
AGACTGAATAGCACCAGCAACACCAAACAGGCACCTGAAGGAACCCCATCATTTACAACG
GAAGAAGATAGCACTACAGAAAGAAGCTTCAAATCACCCATTGTAATCATGAAGCCTGCA
AAATCTGCAGACCTGTTAAGTGATGTAACCGAGGATTCCGCTGTTGGTCCATTAGGCGGT
TTATCAGAGCTACCGCAGCTGAGAACAGCCAATAGTGCTGATAAAAGGAAAAGCTCAAAG
AAGGTCACTAGGGAAGCTGTGGAGCAACATACCAAATCTAGTTCAAGGGCACCTACACCT
CAACACCTTGCTTCTTTTGACAAGAGAGCAAATGGAAGGAATGAAGAAATTAGCAGGAAA
CAGAAGTCTACTTCACAGCTGATGACTGAGAACTCAGCTAGGAGACAGCAGATGCAAAGA
GAAAATAATGGAAGCTTGCTAAAGCATAAAAATTCCACTAGCCCTAGAGTACAACAGAAA
AAACCTGATTCAGAGCGGAGGGCCAGACCGCCAATTCCCTCTCCCGATTCAAGCAAGAAT
CAAAGGCAATCTGTGGAAAGGAGCCATTTGGATTCAGTATCACCCAGAAGTAAATTTAGA
AGAAAACCTGCTCAAGCACAAGGTGAAGATTTCCATCAAAATGGTGTAAGTAGAAGGACA
AGGAGCCTGAACCAGGAAGGCAATGATATGTCCGCAAGGTCAGATGGTAGCATAAGTGTT
GCATCAGAGCTGGATGTAGAAGTGACAAGTACAGACAGATCTGCAGAAGTTAACATTTTG
AGATCTCAGCATGGCACTCAAACACCATCAGGAAGGAATCCTCAAAAAGTGAAAACCTCT
TATGATGCAAACAAGGACCTGCCATCTATGGATCCTGCAGCAACTATTACTGAGCGGCCT
AGTCCAGTCTCTGTATTGGACTCTTCGTTTGATCAGGAGGAATTTTTCCATACCAGCAAG
ACCACAAATTCATCTAATGTTGATGATGAGCATCACCCATCACCAT
clustalw multiple alignements is not computed in this case