cluster # 5724

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Oryza sativa
cluster # 5724 cluster # 5724 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5724#0 length = 1407 sequences # 3
consensusID : consensus_5724#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1407
fasta sequence
                              [AACCTCACAATTCTCCATGGCAATAGAGCTAAAGGCTTCACTCTAACACTGAGGAGTGCAACCGACTCGATATCCAGCAGCCATGTCGGCGCCGGCTGGTCTGCGGCA-NACTGCGCATTGGGCCGCGCCATAGCCGTCGTCGCCATCTGCCTCCTCGTCATCGTCGGCACGTACCTTCTATCTTCTCCGGCCGCCGGCGAC-GCGACACGGAGGAGGAGTTCTTCAGCGTGAGGCGCCG-CGTCGTTCATCGGTCGACGCCGGCGACGACGATCTGGAGGCGGCGGTGCGCGGGGCGGCGTACGCGAACGGGACGNTGATCGTGAGCGTGCTGAACAGGGCGTACG-CGAC-GAGGACGGCGGCCTTCTNGACCTTTTCCTCCGGAGCATGAGGGAAGGGGAGGGCACCGAGCAGCTCATCGCCCACGTCCTCCTCGTCGCCATGGACCGGCCGGCCTTCCTCCGCTGCAGGCGCCTCGGCGGCGTCCGGTGCTACCAGCTCCCGGCGGCGCAGGACGGCGCCGACGACCTCTCGTCGGAGCAGCTCTACATGTCCGACGGCTTCATACGCATGATGTGGCGACGCATTCGCCTCCTCGGCGACGTCCTCAAGCTCGGCTACAGCTTCATCTTCACCGATTTGGATGTGATGTGGCTGAGGAACCCGTTGTCGAGGCTGGAGTACAGGGCGGAGGAGGAGGACCTCCTGATCAGCTCCGACCAGTTCAACGGCCGCCCCGGCGACATCGCCGGCAACGAGCTCAACACCGGCTTCTTCTTCGTGGCCTCCAACAACCGCACGGCGGCGCTGTTCGACGAGTGGCACGCGGCGCGGGACCGCTCGGCGGGAATGAAGGAGCAGGACGTGCTCAACGACATGAAGCGCCGCGGCGCGC-TCCGCCGCCTCGGCGTCCGCGCCCGCGTCCTCGACACGGCGCGCTTCAGCGGCTTCTGCCAGGACAGCCGCGACGCCCGCGAGGTCGCCACCGTGCACGCCAACTGCTGCCGGACCATGCGCGCCAAGGTCGCCGACCTCGCGGCCGTCCTCGCCGCGGCGCGGCGGCGCC-TCGACGGCGACGGCGCGTCGCCGGT-GCTCAGGTGGCCGCCGCACTCCCAGTGTGTCAAGTCATGGGAG-TGAGGCGACACACACACGCACAGAATGGTCGTGAGCTAACAGCTGCTACTACTGATTATTTTTTTTTTGTTCAAAAGCTGAAGAACAATACTACTAC-AGTATGAAAGTTGCAGAGAGAAATGGAATTTTATAACAACATATGTGGCATATCAAGATTGGTTCTGAACTTAATGTTATACATAGGGAACCCTGCATTTCTTGTACTTGCCATATATATACAGGGAGTCCTGCATTTGAGCTCTATCAAATAGTACTAGCTAACAAATTGGGTGATAT]

[+] EMBL C91745               [AACCTCACAATTCTCCATGGCAATAGAGCTAAAGGCTTCACTCTAACACTGAGGAGTGCAACCGACTCGATATCCAGCAGCCATGTCGGCGCCGGCTGGTCTGCGGCA NACTGCGCATTGGGCCGCGCCATAGCCGTCGTCGCCATCTGCCTCCTCGTCATCGTCGGCACGTACCTTCTATCTTCTCCGGCCGCCGGCGAC GCGACACGGAGGAGGAGTTCTTCAGCGTGAGGCGCCG CGTCGTTCATCGGTCGACGCCGGCGACGACGATCTGGAGGCGGCGGTGCGCGGGGCGGCGTACGCGAACGGGACGNTGATCGTGAGCGTGCTGAACAGGGCGTACG CGACGGAGGACGGCGGCCTTCTNGACCTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK105543             [                                       ACTCTAACACTGAGGAGTGCAACCGACTCGATATCCAGCAGCCATGTCGGCGCCGGCTGGTCTGCGGCAGCACTGCGCATTGGGCCGCGCCATAGCCGTCGTCGCCATCTGCCTCCTCGTCATCGTCGGCACGTACCTTCTATCTTCTCCGGCCGCCGGCGACGGCGACACGGAGGAGGAGTTCTTCAGCGTGAGGCGCCGCCGTCGTTCATCGGTCGACGCCGGCGACGACGATCTGGAGGCGGCGGTGCGCGGGGCGGCGTACGCGAACGGGACGCTGATCGTGAGCGTGCTGAACAGGGCGTACGCCGAC GAGGACGGCGGCCTGCTCGACCTCTTCCTCCGGAGCATGAGGGAAGGGGAGGGCACCGAGCAGCTCATCGCCCACGTCCTCCTCGTCGCCATGGACCGGCCGGCCTTCCTCCGCTGCAGGCGCCTCGGCGGCGTCCGGTGCTACCAGCTCCCGGCGGCGCAGGACGGCGCCGACGACCTCTCGTCGGAGCAGCTCTACATGTCCGACGGCTTCATACGCATGATGTGGCGACGCATTCGCCTCCTCGGCGACGTCCTCAAGCTCGGCTACAGCTTCATCTTCACCGATTTGGATGTGATGTGGCTGAGGAACCCGTTGTCGAGGCTGGAGTACAGGGCGGAGGAGGAGGACCTCCTGATCAGCTCCGACCAGTTCAACGGCCGCCCCGGCGACATCGCCGGCAACGAGCTCAACACCGGCTTCTTCTTCGTGGCCTCCAACAACCGCACGGCGGCGCTGTTCGACGAGTGGCACGCGGCGCGGGACCGCTCGGCGGGAATGAAGGAGCAGGACGTGCTCAACGACATGAAGCGCCGCGGCGCGC TCCGCCGCCTCGGCGTCCGCGCCCGCGTCCTCGACACGGCGCGCTTCAGCGGCTTCTGCCAGGACAGCCGCGACGCCCGCGAGGTCGCCACCGTGCACGCCAACTGCTGCCGGACCATGCGCGCCAAGGTCGCCGACCTCGCGGCCGTCCTCGCCGCGGCGCGGCGGCGCC TCGACGGCGACGGCGCGTCGCCGGT GCTCAGGTGGCCGCCGCACTCCCAGTGTGTCAAGTCATGGGAG TGAGGCGACACACACACGCACAGAATGGTCGTGAGCTAACAGCTGCTACTACTGATTATTTTTTTTTTGTTCAAAAGCTGAAGAACAATACTACTAC AGTATGAAAGTTGCAGAGAGAAATGGAATTTTATAACAACATATGTGGCATATCAAGATTGGTTCTGAACTTAATGTTATACATAGGGAACCCTGCATTTCTTGTACTTGCCATATATATACAGGGAGTCCTGCATTTGAGCTCTATCAAATAGTACTAGCTAACAAATTGGGTGATAT]
[+] EMBL C73644               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCGCTGTTCGACGAGTGGCACGCGCCGCGGGACCGCTCGGCGGGAATGAAGGAGCAGGACGTGCTCAACGACATGAAGCGCCGCGGCG GCNTCCTCCGCCTCGGCGTCCGCGCCCGCGTCCTCGACACGGCGCGCTTCAG GGCTTCTGCCAGGACAGCCGCGACG CCGCGAGGTCGCCACCGTGCACGCCAACTGCTGCCGGACCATGCGCGCCAAGGTCGCCGACCTCGCGGCCGTCCTCGCCGCGGCGCGG GNCGCCTTCGACGGCGACGGCGCGTCGCCGTTGGCTCAGGTGGCCGCCGNACTTCCAGTGTGTCAAGTCATGGGAGTTAAGGCGACACACACACACACAGAATGGTCGTGAGCTAACAGCTGCTAATACTGATTA TTTTTTTTTGTTCAAAAGTTGAAG ACAATACTACTACAAGTATGAAAGTTtc                                                                                                                                                                     ]




>consensus_5724#0
AACCTCACAATTCTCCATGGCAATAGAGCTAAAGGCTTCACTCTAACACTGAGGAGTGCA
ACCGACTCGATATCCAGCAGCCATGTCGGCGCCGGCTGGTCTGCGGCANACTGCGCATTG
GGCCGCGCCATAGCCGTCGTCGCCATCTGCCTCCTCGTCATCGTCGGCACGTACCTTCTA
TCTTCTCCGGCCGCCGGCGACGCGACACGGAGGAGGAGTTCTTCAGCGTGAGGCGCCGCG
TCGTTCATCGGTCGACGCCGGCGACGACGATCTGGAGGCGGCGGTGCGCGGGGCGGCGTA
CGCGAACGGGACGNTGATCGTGAGCGTGCTGAACAGGGCGTACGCGACGAGGACGGCGGC
CTTCTNGACCTTTTCCTCCGGAGCATGAGGGAAGGGGAGGGCACCGAGCAGCTCATCGCC
CACGTCCTCCTCGTCGCCATGGACCGGCCGGCCTTCCTCCGCTGCAGGCGCCTCGGCGGC
GTCCGGTGCTACCAGCTCCCGGCGGCGCAGGACGGCGCCGACGACCTCTCGTCGGAGCAG
CTCTACATGTCCGACGGCTTCATACGCATGATGTGGCGACGCATTCGCCTCCTCGGCGAC
GTCCTCAAGCTCGGCTACAGCTTCATCTTCACCGATTTGGATGTGATGTGGCTGAGGAAC
CCGTTGTCGAGGCTGGAGTACAGGGCGGAGGAGGAGGACCTCCTGATCAGCTCCGACCAG
TTCAACGGCCGCCCCGGCGACATCGCCGGCAACGAGCTCAACACCGGCTTCTTCTTCGTG
GCCTCCAACAACCGCACGGCGGCGCTGTTCGACGAGTGGCACGCGGCGCGGGACCGCTCG
GCGGGAATGAAGGAGCAGGACGTGCTCAACGACATGAAGCGCCGCGGCGCGCTCCGCCGC
CTCGGCGTCCGCGCCCGCGTCCTCGACACGGCGCGCTTCAGCGGCTTCTGCCAGGACAGC
CGCGACGCCCGCGAGGTCGCCACCGTGCACGCCAACTGCTGCCGGACCATGCGCGCCAAG
GTCGCCGACCTCGCGGCCGTCCTCGCCGCGGCGCGGCGGCGCCTCGACGGCGACGGCGCG
TCGCCGGTGCTCAGGTGGCCGCCGCACTCCCAGTGTGTCAAGTCATGGGAGTGAGGCGAC
ACACACACGCACAGAATGGTCGTGAGCTAACAGCTGCTACTACTGATTATTTTTTTTTTG
TTCAAAAGCTGAAGAACAATACTACTACAGTATGAAAGTTGCAGAGAGAAATGGAATTTT
ATAACAACATATGTGGCATATCAAGATTGGTTCTGAACTTAATGTTATACATAGGGAACC
CTGCATTTCTTGTACTTGCCATATATATACAGGGAGTCCTGCATTTGAGCTCTATCAAAT
AGTACTAGCTAACAAATTGGGTGATAT
clustalw multiple alignements is not computed in this case