cluster # 5725

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Oryza sativa
cluster # 5725 cluster # 5725 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5725#0 length = 2029 sequences # 3
consensusID : consensus_5725#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2029
fasta sequence
                              [AAGCGGCGCCGCGAGCCTCAGTGTCAGGAGCAGGAGCCCAACCAGCCGCAGTCGCCGAAGCCCCCCACCGCGGAGGAAACCGCCGCCGCTGCCGCGGCCGCCAAGGAGCGGAAGGAGGAGCAGCGGCGGAAGCAGCGCGACGAGGAGGGCCTCCACCTGCTGACGCTGCTGCTCCAGTGCGCGGAGTCGGTGAACGCGGACAACCTCGACGAGGCGCACCGCGCGCTGCTGGAGATCGCGGAGCTTGCCACGCCGTTCGGCACATCCACGCAGCGCGTCGCCGCCTACTTCGCGGAGGCCATGTCGGCGCGGCTGGTGAGCTCGTGCCTGGGGCTGTACGCGCCGCTCCCCAACCCGTCCCCGGCGGCGGCGCGTCTCCACGGGCGCGTCGCCGCGGCGTTCCAGGTGTTCAACGGCATCAGCCCGTTCGTGAAGTTCTCGCACTTCACGGCGAACCAGGCGATCCAGGAGGCGTTCGAGAGGGAGGAGAGGGTGCACATCATCGACCTGGACATCATGCAGGGGCTCCAATGG-CCGGGGCTGTTCCACATCCTGGCGTCGAGGCCGGGGGGGCCGCCGAGGGTGAGGCTGACCGGGCTGGGGGCGTCCATGGAGGCGCTGGAGGCGACGGGGAAGAGGCTATCGGACTTCGCGGACACGCTGGGATTGCCATTCGAGTTCTGCCCGGTGGCTGACAAGGCCGGGAATCTTGACCCGGAG-AAGCTAGGCGTCACG-CGCCGCGAGG-CCGTCGCCGTCCACTGGC-TGCGCC-ACTCCCTCTACGATGTC-ACCGGC-TCCGACTCCAACACGCTCTGGCTCATCCAGAGGTTGGCGCCAAAGGTTGTAACAATGGTGGAGCAGGATCTGAGCCACTCAGGCTCCTTCCTGGCACGTTTTGTGGAGGCCATCCACTACTATTCGGCACTGTTCGACTCGCTTGATGCGAGTTACAGCGAGGATAGCCCGGAGCGGCATGTCGTGGAGCAACAACTCTTGTCACGGGAGATCCGCAATGTGCTAGCCGTGGGCGGTCCAGCACGCACCGGCGATGTTAAGTTTGGGAGCTGGCGCGAGAAGCTTGCGCAGTCGGGCTTCCGTGTGTCGTCGCTTGCTGG-AAGTGCCGCTGCTCAGGCCGTGCTGCTGCTTGGGATGTTCCCTTCCGATGGGTACACGCTCATTGAGGAGAATGGCGCCCTGAAGCTTGGATGGAAGGATCTGTGCCTTCTCACTGCCTCTGCTTGGCGCCCAATTCAGGCTTCGGGACGTTAGTACTGAGGGGGAATTTATAGAGCTGAAGTATCACTTGATCTTACTTAGGTGCAATTACCTAGTCCTTTTGCTTCTTTTAGCTGCTCAATTTGGTCAATTCTGAGAAAAGAAAAATAAAAAAAATTCTGATCACTAATTGCCAGATCTCCACACGGTGGTAGTTACTGATGTGCAGCTTAGCTTTAGCTTTTATTCTGTTCATGCTCCAGTTAACCATTCTGTCCAGTTTAGTTTATTTTGCAATTTTGTAGTGCTTAATCCTTGCTGACATTGTTTTGGGGGAACACGCAAAAGGATCCTTACTGACATTAGAGATGCAGTTCTTATCGTATGATCATTGATCACAAAATGAAATATCTGGTGGTTAGTGAGCTCAATTAGATTGTTGATAGTGTAGCATTGTCAATGATCACCAAATAATATTGTTAGTGTCCATCTACTATGAGAATTTACATGTACATTTAAGTTAATGTTCCTAATTTTCTCCAGAAAATGACTTAGGGTTGATCTGAATGCCAAATTATCAGCAATGAACTAATGATGGGTAGCACATGAGTTGTGTACTAGAAAGTCAGGATGTTAGTGGTTTTAATTCATGCCATCTAAATCCTGCTAATTCTTTTCTTCTGAAATATTTGAAACCACTGACCTACACTGCTCATTTAGACATTGGTGTATCACTTTTCTAACATTTTTGCATTACAATAATCTTATTATGTAATTCACTTATTCCTGTATCCGGCATCTACTGGATATACATGGT]

[+] EMBL AK073467             [AAGCGGCGCCGCGAGCCTCAGTGTCAGGAGCAGGAGCCCAACCAGCCGCAGTCGCCGAAGCCCCCCACCGCGGAGGAAACCGCCGCCGCTGCCGCGGCCGCCAAGGAGCGGAAGGAGGAGCAGCGGCGGAAGCAGCGCGACGAGGAGGGCCTCCACCTGCTGACGCTGCTGCTCCAGTGCGCGGAGTCGGTGAACGCGGACAACCTCGACGAGGCGCACCGCGCGCTGCTGGAGATCGCGGAGCTTGCCACGCCGTTCGGCACATCCACGCAGCGCGTCGCCGCCTACTTCGCGGAGGCCATGTCGGCGCGGCTGGTGAGCTCGTGCCTGGGGCTGTACGCGCCGCTCCCCAACCCGTCCCCGGCGGCGGCGCGTCTCCACGGGCGCGTCGCCGCGGCGTTCCAGGTGTTCAACGGCATCAGCCCGTTCGTGAAGTTCTCGCACTTCACGGCGAACCAGGCGATCCAGGAGGCGTTCGAGAGGGAGGAGAGGGTGCACATCATCGACCTGGACATCATGCAGGGGCTCCAATGG CCGGGGCTGTTCCACATCCTGGCGTCGAGGCCGGGGGGGCCGCCGAGGGTGAGGCTGACCGGGCTGGGGGCGTCCATGGAGGCGCTGGAGGCGACGGGGAAGAGGCTATCGGACTTCGCGGACACGCTGGGATTGCCATTCGAGTTCTGCCCGGTGGCTGACAAGGCCGGGAATCTTGACCCGGAG AAGCTAGGCGTCACG CGCCGCGAGG CCGTCGCCGTCCACTGGC TGCGCC ACTCCCTCTACGATGTC ACCGGC TCCGACTCCAACACGCTCTGGCTCATCCAGAGGTTGGCGCCAAAGGTTGTAACAATGGTGGAGCAGGATCTGAGCCACTCAGGCTCCTTCCTGGCACGTTTTGTGGAGGCCATCCACTACTATTCGGCACTGTTCGACTCGCTTGATGCGAGTTACAGCGAGGATAGCCCGGAGCGGCATGTCGTGGAGCAACAACTCTTGTCACGGGAGATCCGCAATGTGCTAGCCGTGGGCGGTCCAGCACGCACCGGCGATGTTAAGTTTGGGAGCTGGCGCGAGAAGCTTGCGCAGTCGGGCTTCCGTGTGTCGTCGCTTGCTGG AAGTGCCGCTGCTCAGGCCGTGCTGCTGCTTGGGATGTTCCCTTCCGATGGGTACACGCTCATTGAGGAGAATGGCGCCCTGAAGCTTGGATGGAAGGATCTGTGCCTTCTCACTGCCTCTGCTTGGCGCCCAATTCAGGCTTCGGGACGTTAGTACTGAGGGGGAATTTATAGAGCTGAAGTATCACTTGATCTTACTTAGGTGCAATTACCTAGTCCTTTTGCTTCTTTTAGCTGCTCAATTTGGTCAATTCTGAGAAAAGAAAAATAAAAAAAATTCTGATCACTAATTGCCAGATCTCCACACGGTGGTAGTTACTGATGTGCAGCTTAGCTTTAGCTTTTATTCTGTTCATGCTCCAGTTAACCATTCTGTCCAGTTTAGTTTATTTTGCAATTTTGTAGTGCTTAATCCTTGCTGACATTGTTTTGGGGGAACACGCAAAAGGATCCTTACTGACATTAGAGATGCAGTTCTTATCGTATGATCATTGATCACAAAATGAAATATCTGGTGGTTAGTGAGCTCAATTAGATTGTTGATAGTGTAGCATTGTCAATGATCACCAAATAATATTGTTAGTGTCCATCTACTATGAGAATTTACATGTACATTTAAGTTAATGTTCCTAATTTTCTCCAGAAAATGACTTAGGGTTGATCTGAATGCCAAATTATCAGCAATGAACTAATGATGGGTAGCACATGAGTTGTGTACTAGAAAGTCAGGATGTTAGTGGTTTTAATTCATGCCATCTAAATCCTGCTAATTCTTTTCTTCTGAAATATTTGAAACCACTGACCTACACTGCTCATTTAGACATTGGTGTATCACTTTTCTAACATTTTTGCATTACAATAATCTTATTATGTAATTCACTTATTCCTGTATCCGGCATCTACTGGATATACATGGT]
[-] EMBL AU093320             [                                                                                                               AAGGAGGAGCAGCGGCGGAAGCAGCGCGACGAGGAGGGCCTCCACCTGCTGACGCTGCTGCTCCAGTGCGCGGAGTCGGTGAACGCGGACAACCTCGACGAGGCGCACCGCGCGCTGCTGGAGATCGCGGAGCTTGCCACGCCGTTCGGCACATCCACGCAGCGCGTCGCCGCCTACTTCGCGGAGGCCATGTCGGCGCGGCTGGTGAGCTCGTGCCTGGGGCTGTACGCGCCGCTCCCCAACCCGTCCCCGGCGGCGGCGCGTCTCCACGGGCGCGTCGCCGCGGCGTTCCAGGTGTTCAACGGCATCAGCCCGTTCGTGAAGTTCTCGCACTTCACGGCGAACCAGGCGATCCAGGAGGCGTTCGAGAGGGAGGAGAGGGTGCACATCATCGACCTGGACATCATGCAGGGGCTCCAATGGCCCGGGGCTGTTCCACATCCTGGCGTCGAGGCCGGGGGGGCCGCCGAGGGTGAGGCTGACCGGGCTGGGGGCGTCCATGGAGGCGCTGGAGGCGACGGGGAAGAGGCTATCGGACTTCGCGGACACGCTGGGATTGCCATTCGAGTTCTGCCCGGTGGCTGACAAGGCCGGGAATCTTGACCCGGAGAAAGCTAGGCGTNACGCCGCCGCGAGGCCCGTCGGCGTCCACTGGCTTGCGCCAATTCCTTTTACGATGTCAACCGGCTTCCGACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL C28500               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCGTGTGCCGTCGCTTGCTGGAAAGTGCCGCTGCTNAGGCCGTGCTGCTGCTTGGGATGTCCCCTTCCGATGGGTACACGCTCATTGAGGAGAATGGCGCCCTGAAGCTTGGATGGAAGGATCTGTGCCTTCTNACTGCCTCTGCTTGGCGCCCAANTCAGGCTTCGGGACGTTAGTACTGAGGGGGAATTTATAGAGCTGAAGTATCACTTGATCTTACTTAGGTGCAATTACCTAGTCCTTTTGCTTCTTTTAGCTGCTCAATTTGGTCAATTCTGAGAAAAGAAAAATAAAAAAAATTCTGATCACTAATTGCCAGATCTCCACACGGTGGTAGTTACTGATGTGCAGCTTAGCTTTAGCTTTTATTCTGTTCATGCTCCAGTTAACCATTCTGTCCAGTTTAGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]




>consensus_5725#0
AAGCGGCGCCGCGAGCCTCAGTGTCAGGAGCAGGAGCCCAACCAGCCGCAGTCGCCGAAG
CCCCCCACCGCGGAGGAAACCGCCGCCGCTGCCGCGGCCGCCAAGGAGCGGAAGGAGGAG
CAGCGGCGGAAGCAGCGCGACGAGGAGGGCCTCCACCTGCTGACGCTGCTGCTCCAGTGC
GCGGAGTCGGTGAACGCGGACAACCTCGACGAGGCGCACCGCGCGCTGCTGGAGATCGCG
GAGCTTGCCACGCCGTTCGGCACATCCACGCAGCGCGTCGCCGCCTACTTCGCGGAGGCC
ATGTCGGCGCGGCTGGTGAGCTCGTGCCTGGGGCTGTACGCGCCGCTCCCCAACCCGTCC
CCGGCGGCGGCGCGTCTCCACGGGCGCGTCGCCGCGGCGTTCCAGGTGTTCAACGGCATC
AGCCCGTTCGTGAAGTTCTCGCACTTCACGGCGAACCAGGCGATCCAGGAGGCGTTCGAG
AGGGAGGAGAGGGTGCACATCATCGACCTGGACATCATGCAGGGGCTCCAATGGCCGGGG
CTGTTCCACATCCTGGCGTCGAGGCCGGGGGGGCCGCCGAGGGTGAGGCTGACCGGGCTG
GGGGCGTCCATGGAGGCGCTGGAGGCGACGGGGAAGAGGCTATCGGACTTCGCGGACACG
CTGGGATTGCCATTCGAGTTCTGCCCGGTGGCTGACAAGGCCGGGAATCTTGACCCGGAG
AAGCTAGGCGTCACGCGCCGCGAGGCCGTCGCCGTCCACTGGCTGCGCCACTCCCTCTAC
GATGTCACCGGCTCCGACTCCAACACGCTCTGGCTCATCCAGAGGTTGGCGCCAAAGGTT
GTAACAATGGTGGAGCAGGATCTGAGCCACTCAGGCTCCTTCCTGGCACGTTTTGTGGAG
GCCATCCACTACTATTCGGCACTGTTCGACTCGCTTGATGCGAGTTACAGCGAGGATAGC
CCGGAGCGGCATGTCGTGGAGCAACAACTCTTGTCACGGGAGATCCGCAATGTGCTAGCC
GTGGGCGGTCCAGCACGCACCGGCGATGTTAAGTTTGGGAGCTGGCGCGAGAAGCTTGCG
CAGTCGGGCTTCCGTGTGTCGTCGCTTGCTGGAAGTGCCGCTGCTCAGGCCGTGCTGCTG
CTTGGGATGTTCCCTTCCGATGGGTACACGCTCATTGAGGAGAATGGCGCCCTGAAGCTT
GGATGGAAGGATCTGTGCCTTCTCACTGCCTCTGCTTGGCGCCCAATTCAGGCTTCGGGA
CGTTAGTACTGAGGGGGAATTTATAGAGCTGAAGTATCACTTGATCTTACTTAGGTGCAA
TTACCTAGTCCTTTTGCTTCTTTTAGCTGCTCAATTTGGTCAATTCTGAGAAAAGAAAAA
TAAAAAAAATTCTGATCACTAATTGCCAGATCTCCACACGGTGGTAGTTACTGATGTGCA
GCTTAGCTTTAGCTTTTATTCTGTTCATGCTCCAGTTAACCATTCTGTCCAGTTTAGTTT
ATTTTGCAATTTTGTAGTGCTTAATCCTTGCTGACATTGTTTTGGGGGAACACGCAAAAG
GATCCTTACTGACATTAGAGATGCAGTTCTTATCGTATGATCATTGATCACAAAATGAAA
TATCTGGTGGTTAGTGAGCTCAATTAGATTGTTGATAGTGTAGCATTGTCAATGATCACC
AAATAATATTGTTAGTGTCCATCTACTATGAGAATTTACATGTACATTTAAGTTAATGTT
CCTAATTTTCTCCAGAAAATGACTTAGGGTTGATCTGAATGCCAAATTATCAGCAATGAA
CTAATGATGGGTAGCACATGAGTTGTGTACTAGAAAGTCAGGATGTTAGTGGTTTTAATT
CATGCCATCTAAATCCTGCTAATTCTTTTCTTCTGAAATATTTGAAACCACTGACCTACA
CTGCTCATTTAGACATTGGTGTATCACTTTTCTAACATTTTTGCATTACAATAATCTTAT
TATGTAATTCACTTATTCCTGTATCCGGCATCTACTGGATATACATGGT
clustalw multiple alignements is not computed in this case