cluster # 5735

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5735 cluster # 5735 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5735#0 length = 1462 sequences # 3
consensusID : consensus_5735#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1462
fasta sequence
                              [TCTCTCTCTCCAAATCTGTGGACATTTCACGCGCGCTCTCCGCTCCAGCCTCCAGCCACCGCCCACCGGCCGGCGATGTCGACGGCGGCGGCGGCCGCGGCGTCCACCTCGCTCCGGCCGGCCTCCCAGTCCGCGCTCCGTCTCGCGGGTTCGCCGCGGCGGTGGTGCTGGGGAGCCCCGGCGCTCTCCCCTGCGAGGAGAGCATTCCACGCGGACACGCGGAGGCGGAAGACTTTGTTATATGCAACTGATAAAGGCCCAGAAGAATCCTTGAAGAAGACAATTGAAGTTGACAGGTTGATCGAGATGCT--GGGATGCAAATCCTAGAGAGCTTGATCAAATAGTGGTTGAAAATGTTCTGGCGTTCGATGAGGGTTTCTGGGTTCGGCTGGCAGCAAGAATTGATCTATGCAAATCGGATGATGATAAAAAAGACTATGAAGAATTGGCTGAAAATGTCATGAACATAGTTGACCGTCTTGTCCATAAGACTGATGAAAAGATTGAACAGTCAACTGATGTGCTGAAGGCAATTATTAGTCCTGTGATGCACGAAGGTGAAAACGCCACGTGGCCACCGAGAGATCCGGAGGCTCTCAAATTGATGGAGAAAGAAATTTCAAATAGAGAAAAAGAAGGACAGCTAGACGAAGGATTTCTGTCAGAGGTTAATGCTCAGTTGAGGCAGGCTAAACAAGATGGAGATAAACCAGGACTTCAAGCTATGCTGCAGAAGGTGTTGCAGCTGTATGCGTCCAATTTTCTCCAAAAGCGTAGTTACGCTTACAAAGGGGGAGAAGTAATAGTGCCTGAAAGTTTTCTTGAATCTGTAATAAAGGCTCCGGAAAACGAGTGGAACAAGCTGTTGCTTGATGGGTTAACAGTGGGGAAAGGAAATGTTTCACCAGAAGAATTTTATGCTGTTATAAAGAAGAGAATTGAGAGAGTCTTAATTCGCACAGAAGGAGGTTCTTATCAGCAGCGCATACTCGTTGAATATCTAAAAGAGATACAGGCTAGAGCGGAGGAAGTTGTGAAGGTGCTTCAAGGACCAACCATATGATGATGTCTGGTGGTCGATTTTAAACAGTGCAGGTTATCCAGTTCGATCATGGTTTTGACGCATCACCTAGCAAAAGCTTAGAAGGCGACAACAGACAACCTAACTAGTTGTCTGATTCAGGAACCCGAGATAAGCATAGCGAGAAGAGAAACAGATCCAAATGTCCTAAAGGAGTGCGTGATTTTCATTCCCCACTTTGGTCTTCATCTCGAATGGCCGATTTTGCTGTTGGAATGTTTGATTTCTGTTCTGTCTGATTGACACTTGACACGAGTGAGCTTGACTAAGCTGTAGTAACATGTGAATCGGTTTTTGTTGTGTAAG-GGAGAAGGTTCAATGCTGAGCTTGACTTGTTACTGAGGTGCTTGTTGAACTCATTTTAAGTTACTGATCCCTGCA]

[+] EMBL AK110919             [TCTCTCTCTCCAAATCTGTGGACATTTCACGCGCGCTCTCCGCTCCAGCCTCCAGCCACCGCCCACCGGCCGGCGATGTCGACGGCGGCGGCGGCCGCGGCGTCCACCTCGCTCCGGCCGGCCTCCCAGTCCGCGCTCCGTCTCGCGGGTTCGCCGCGGCGGTGGTGCTGGGGAGCCCCGGCGCTCTCCCCTGCGAGGAGAGCATTCCACGCGGACACGCGGAGGCGGAAGACTTTGTTATATGCAACTGATAAAGGCCCAGAAGAATCCTTGAAGAAGACAATTGAAGTTGACAGGTTGATCGAGATGCT  GGGATGCAAATCCTAGAGAGCTTGATCAAATAGTGGTTGAAAATGTTCTGGCGTTCGATGAGGGTTTCTGGGTTCGGCTGGCAGCAAGAATTGATCTATGCAAATCGGATGATGATAAAAAAGACTATGAAGAATTGGCTGAAAATGTCATGAACATAGTTGACCGTCTTGTCCATAAGACTGATGAAAAGATTGAACAGTCAACTGATGTGCTGAAGGCAATTATTAGTCCTGTGATGCACGAAGGTGAAAACGCCACGTGGCCACCGAGAGATCCGGAGGCTCTCAAATTGATGGAGAAAGAAATTTCAAATAGAGAAAAAGAAGGACAGCTAGACGAAGGATTTCTGTCAGAGGTTAATGCTCAGTTGAGGCAGGCTAAACAAGATGGAGATAAACCAGGACTTCAAGCTATGCTGCAGAAGGTGTTGCAGCTGTATGCGTCCAATTTTCTCCAAAAGCGTAGTTACGCTTACAAAGGGGGAGAAGTAATAGTGCCTGAAAGTTTTCTTGAATCTGTAATAAAGGCTCCGGAAAACGAGTGGAACAAGCTGTTGCTTGATGGGTTAACAGTGGGGAAAGGAAATGTTTCACCAGAAGAATTTTATGCTGTTATAAAGAAGAGAATTGAGAGAGTCTTAATTCGCACAGAAGGAGGTTCTTATCAGCAGCGCATACTCGTTGAATATCTAAAAGAGATACAGGCTAGAGCGGAGGAAGTTGTGAAGGTGCTTCAAGGACCAACCATATGATGATGTCTGGTGGTCGATTTTAAACAGTGCAGGTTATCCAGTTCGATCATGGTTTTGACGCATCACCTAGCAAAAGCTTAGAAGGCGACAACAGACAACCTAACTAGTTGTCTGATTCAGGAACCCGAGATAAGCATAGCGAGAAGAGAAACAGATCCAAATGTCCTAAAGGAGTGCGTGATTTTCATTCCCCACTTTGGTCTTCATCTCGAATGGCCGATTTTGCTGTTGGAATGTTTGATTTCTGTTCTGTCTGATTGACACTTGACACGAGTGAGCTTGACTAAGCTGTAGTAACATGTGAATCGGTTTTTGTTGTGTAAG GGAGAAGGTTCAATGCTGAGCTTGACTTGTTACTGAGGTGCTTGTTGAACTCATTTTAAGTTACTGATCCCTGCA]
[+] EMBL CB654086             [                                                                ACCGGCCCGTGATGTCGACGGCGGCGGCGGCCGCGGCGTCCACCTCGCTCCGGCCGGCCTCCCAGTCCGCGCTCCGTCTCGCGGGTTCGCCGCGGCGGTGGTGCTGGGGAGCCCCGGCGCTCTCCCCTGCGAGGAGAGCATTCCACGCGGACACGCGGAGGCGGAAGACTTTGTTATATGCAACTGATAAAGGCCCAGAAGAATCCTTGAAGAAGACAATTGAAGTTGACAGGTTGATCGAGATGCTGAGGGATGCAAATCCTAGAGAGCTTGATCAAATAGTGGTTGAAAATGTTCTGGCGTTCGATGAGGGTTTCTGGGTTCGGCTGGCAGCAAGAATTGATCTATGCAAATCGGATGATGATAAAAAAGACTATGAAGAATTGGCTGAAAATGTCATGAACATAGTTGACCGTCTTGTCCATAAGACTGATGAAAAGATTGAACAGTCAACTGATGTGCTGAAGGCAATTATTAGTCCTGTGATGCACGAAGGTGAAAACGCCACGTGGCCACCGAGAGATCCGGAGGCTCTCAAATTGATGGAGAAAGAAATTTCAAATAGAGAAAAAGAAGGACAGCTAGACGAAGGATTTCTGTCAGAGGTTAATGCTCAGTTGAGGCAGGCTAAACAAGATGGAGATAAACCAGGACTTCAAGCTATGCTGCAGAAGGTGTTGCAGCTGTATGCGTCCAATTTTCTCCAAAAGCGTAGTTACGCTTACAAAGGGGGAGAAGTAATAATGCCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB654087             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGCTCAGTTGAGGCAGGCTAAACAAGATGGAGATAAACCAGGACTTCAAGCTATGCTGCAGAAGGTGTTGCAGCTGTATGCGTCCAATTTTCTCCAAAAGCGTAGTTACGCTTACAAAGGGGGAGAAGTAATAGTGCCTGAAAGTTTTCTTGAATCTGTAATAAAGGCTCCGGAAAACGAGTGGAACAAGCTGTTGCTTGATGGGTTAACAGTGGGGAAAGGAAATGTTTCACCAGAAGAATTTTATGCTGTTATAAAGAAGAGAATTGAGAGAGTCTTAATTCGCACAGAAGGAGGTTCTTATCAGCAGCGCATACTCGTTGAATATCTAAAAGAGATACAGGCTAGAGCGGAGGAAGTTGTGAAGGTGCTTCAAGGACCAACCATATGATGATGTCTGGTGGTCGATTTTAAACAGTGCAGGTTATCCAGTTCGATCATGGTTTTGACGCATCACCTAGCAAAAGCTTAGAAGGCGACAACAGACAACCTAACTAGTTGTCTGATTCAGGAACCCGAGATAAGCATAGCGAGAAGAGAAACAGATCCAAATGTCCTAAAGGAGTGCGTGATTTTCATTCCCCACTTTGGTCTTCATCTCGAATGGCCGATTTTGCTGTTGGAATGTTTGATTTCTGTTCTGTCTGATTGACACTTGACACGAGTGAGCTTGACTAAGCTGTAGTAACATGTGAATCGGTTTTTGTTGTGTTAGAAGGGAAGGTTCAATGCTGAGC                                                      ]




>consensus_5735#0
TCTCTCTCTCCAAATCTGTGGACATTTCACGCGCGCTCTCCGCTCCAGCCTCCAGCCACC
GCCCACCGGCCGGCGATGTCGACGGCGGCGGCGGCCGCGGCGTCCACCTCGCTCCGGCCG
GCCTCCCAGTCCGCGCTCCGTCTCGCGGGTTCGCCGCGGCGGTGGTGCTGGGGAGCCCCG
GCGCTCTCCCCTGCGAGGAGAGCATTCCACGCGGACACGCGGAGGCGGAAGACTTTGTTA
TATGCAACTGATAAAGGCCCAGAAGAATCCTTGAAGAAGACAATTGAAGTTGACAGGTTG
ATCGAGATGCTGGGATGCAAATCCTAGAGAGCTTGATCAAATAGTGGTTGAAAATGTTCT
GGCGTTCGATGAGGGTTTCTGGGTTCGGCTGGCAGCAAGAATTGATCTATGCAAATCGGA
TGATGATAAAAAAGACTATGAAGAATTGGCTGAAAATGTCATGAACATAGTTGACCGTCT
TGTCCATAAGACTGATGAAAAGATTGAACAGTCAACTGATGTGCTGAAGGCAATTATTAG
TCCTGTGATGCACGAAGGTGAAAACGCCACGTGGCCACCGAGAGATCCGGAGGCTCTCAA
ATTGATGGAGAAAGAAATTTCAAATAGAGAAAAAGAAGGACAGCTAGACGAAGGATTTCT
GTCAGAGGTTAATGCTCAGTTGAGGCAGGCTAAACAAGATGGAGATAAACCAGGACTTCA
AGCTATGCTGCAGAAGGTGTTGCAGCTGTATGCGTCCAATTTTCTCCAAAAGCGTAGTTA
CGCTTACAAAGGGGGAGAAGTAATAGTGCCTGAAAGTTTTCTTGAATCTGTAATAAAGGC
TCCGGAAAACGAGTGGAACAAGCTGTTGCTTGATGGGTTAACAGTGGGGAAAGGAAATGT
TTCACCAGAAGAATTTTATGCTGTTATAAAGAAGAGAATTGAGAGAGTCTTAATTCGCAC
AGAAGGAGGTTCTTATCAGCAGCGCATACTCGTTGAATATCTAAAAGAGATACAGGCTAG
AGCGGAGGAAGTTGTGAAGGTGCTTCAAGGACCAACCATATGATGATGTCTGGTGGTCGA
TTTTAAACAGTGCAGGTTATCCAGTTCGATCATGGTTTTGACGCATCACCTAGCAAAAGC
TTAGAAGGCGACAACAGACAACCTAACTAGTTGTCTGATTCAGGAACCCGAGATAAGCAT
AGCGAGAAGAGAAACAGATCCAAATGTCCTAAAGGAGTGCGTGATTTTCATTCCCCACTT
TGGTCTTCATCTCGAATGGCCGATTTTGCTGTTGGAATGTTTGATTTCTGTTCTGTCTGA
TTGACACTTGACACGAGTGAGCTTGACTAAGCTGTAGTAACATGTGAATCGGTTTTTGTT
GTGTAAGGGAGAAGGTTCAATGCTGAGCTTGACTTGTTACTGAGGTGCTTGTTGAACTCA
TTTTAAGTTACTGATCCCTGCA
clustalw multiple alignements is not computed in this case