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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5742 cluster # 5742       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5742#0 length = 741 sequences # 3  

consensusID : consensus_5742#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 741
fasta sequence
                              [TATGCTTTTAGCATTATTGTTGTTGTCTTATGGAGTTGGCAGCATCCGTTGCGCAACGGCCACAGACAACAGCACGGATATGTCATCGTTGCTCGAATTCAAGAAGGCCATCAATGATCCAACGGGGGCATTGAACAGTTGGAGCACGGTCGTTCCCCATTGCCAGTGGATGGGTGTTAATTGTAGCCGAAGGCATGCCGGCCGAGTCACGGCACTCAACCTTGCTGCCCAAGGCTTGTCGGGTTCGATTCCCGCCTCTGTGGGAAACCTGACATTCCTTCGTACACTTGACCTGTCCAGTAATAACTTCTTCGGCCAGATGCCCCATCTTAACAATCTCCAGAAGATGCAAATCCTTAACCTGAGCTATAATTCATTAGATGGCATAATACCAGACACACTCACCAATTGTTCCAGCCTCAAGGAATTACATCTCTATCATAACACTCTAAGGAGTGAAATTCCAAGGAACATAGGTCTCCTTACTAATCTAGTTTTGTTGGCCCTTAACAGTAACAATCTTACCGGTTCCATCCCTCAATCTGTCGGTAACATTACCCATTTAGATAAAATCTATCTTGAGTTGAATCAACTTGCAGGAAACATTCCCGAAGAACTTGGCCAATTTTCTAATATTACAGTGCTGGGCCTAGGGGATAATAGGCTATCGGGAATTATACCAGCCAGCCTTTTTAATTTGTCCTCTCTTCAAACTCTAAAATTGAGTGCAAATCAGTTAGG]

[+] EMBL CB635431             [TATGCTTTTAGCATTATTGTTGTTGTCTTATGGAGTTGGCCGCATCCGTTGCGCAACGGCCACAGACAACAGCACGGATATGTCATCGTTGCTCGAATTCAAGAAGGCCATCAATGATCCAACGGGGGCATTGAACAGTTGGAGCACGGTCGTTCCCCATTGCCAGTGGATGGGTGTTAATTGTAGCCGAAGGCATGCCGGCCGAGTCACGGCACTCAACCTTGCTGCCCAAGGCTTGTCGGGTTCGATTCCCGCCTCTGTGGGAAACCTGACATTCCTTCGTACACTTGACCTGTCCAGTAATAACTTCTTCGGCCAGATGCCCCATCTTAACAATCTCCAGAAGATGCAAATCCTTAACCTGAGCTATAATTCATTAGATGGCATAATACCAGACACACTCACCAATTGTTCCAGCCTCAAGGAATTACATCTCTATCATAACACTCTAAGGAGTGAAATTCCAAGGAACATAGGTCTCCTTACTAATCTAGTTTTGTTGGCCCTTAACAGTAACAATCTTACCGGTTCCATCCCTCAATCTGTCGGTAACATTACCCATTTAGATAAAATCTATCTTGAGTTGAATCAACTTGCAGGAAACATTCCCGAAGAACTTGGCCAATTTTCTAATATTACAGTGCTGGGCCTAGGGGATAATAGGCTATCGGGAATTATACCAGCCAGCCTTTTTAATTTGTCCTCTCTTCAAACTCTAAAATTGAGTGCAAATCAGTTAGG]
[+] EMBL CB628959             [TATGCTTTTAGCATTATTGTTGTTGTCTTATGGAGTTGGCAGCATCCGTTGCGCAACGGCCACAGACAACAGCACGGATATGTCATCGTTGCTCGAATTCAAGAAGGCCATCAATGATCCAACGGGGGCATTGAACAGTTGGAGCACGGTCGTTCCCCATTGCCAGTGGATGGGTGTTAATTGTAGCCGAAGGCATGCCGGCCGAGTCACGGCACTCAACCTTGCTGCCCAAGGCTTGTCGGGTTCGATTCCCGCCTCTGTGGGAAACCTGACATTCCTTCGTACACTTGACCTGTCCAGTAATAACTTCTTCGGCCAGATGCCCCATCTTAACAATCTCCAGAAGATGCAAATCCTTAACCTGAGCTATAATTCATTAGATGGCATAATACCAGACACACTCACCAATTGTTCCAGCCTCAAGGAATTACATCTCTATCATAACACTCTAAGGAGTGAAATTCCAAGGAACATAGGTCTCCTTACTAATCTAGTTTTGTTGGCCCTTAACAGTAACAATCTTACCGGTTCCATCCCTCAATCTGTCGGTAACATTACCCATTTAGATAAAATCTATCTTGAGTTGAATCAACTTGCAGGAAACATTC                                                                                                                                     ]
[+] EMBL CB631562             [TATGCTTTTAGCATTATTGTTGTTGTCTTATGGAGTTGGCAGCATCCGTTGCGCAACGGCCACAGACAACAGCACGGATATGTCATCGTTGCTCGAATTCAAGAAGGCCATCAATGATCCAACGGGGGCATTGAACAGTTGGAGCACGGTCGTTCCCCATTGCCAGTGGATGGGTGTTAATTGTAGCCGAAGGCATGCCGGCCGAGTCACGGCACTCAACCTTGCTGCTCAAGGCTTGTCGGGTTCGATTCCCGCCTCTGTGGGAAACCTGACATTCCTTCGTACACTTGACCTGTCCAGTAATAACTTCTTCGGCCAGATGCCCCATCTTAACAATCTCCAGAAGATGCAAATCCTTAACCTGAGCTATAATTCATTAGATGGCATAATACCAGACACACTCACCAATTGTTCCAGCCTCAAGGAATTACATCTCTATCATAACACTCTAAGGAGTGAAATTCCAAGGAACATAGGTCTCCTTACTAATCTAGTTTTGTTGGCCCTTAACAGTAACAATCTTACCGGTTCCATCCCTCAATCTGTCGGTAACA                                                                                                                                                                                           ]


>consensus_5742#0 TATGCTTTTAGCATTATTGTTGTTGTCTTATGGAGTTGGCAGCATCCGTTGCGCAACGGC CACAGACAACAGCACGGATATGTCATCGTTGCTCGAATTCAAGAAGGCCATCAATGATCC AACGGGGGCATTGAACAGTTGGAGCACGGTCGTTCCCCATTGCCAGTGGATGGGTGTTAA TTGTAGCCGAAGGCATGCCGGCCGAGTCACGGCACTCAACCTTGCTGCCCAAGGCTTGTC GGGTTCGATTCCCGCCTCTGTGGGAAACCTGACATTCCTTCGTACACTTGACCTGTCCAG TAATAACTTCTTCGGCCAGATGCCCCATCTTAACAATCTCCAGAAGATGCAAATCCTTAA CCTGAGCTATAATTCATTAGATGGCATAATACCAGACACACTCACCAATTGTTCCAGCCT CAAGGAATTACATCTCTATCATAACACTCTAAGGAGTGAAATTCCAAGGAACATAGGTCT CCTTACTAATCTAGTTTTGTTGGCCCTTAACAGTAACAATCTTACCGGTTCCATCCCTCA ATCTGTCGGTAACATTACCCATTTAGATAAAATCTATCTTGAGTTGAATCAACTTGCAGG AAACATTCCCGAAGAACTTGGCCAATTTTCTAATATTACAGTGCTGGGCCTAGGGGATAA TAGGCTATCGGGAATTATACCAGCCAGCCTTTTTAATTTGTCCTCTCTTCAAACTCTAAA ATTGAGTGCAAATCAGTTAGG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)