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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5748#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2391 fasta sequence
[GAAAAGGTCTTCTCAAGATTCAGTCATGGCGATCGCCGCAAGCAGGGCCAACGCCAACGCCAACCGAAGCCGCCACCATCATCAACCGAGGCGGTGGGAAAAAAATTCCTCCCAATGCTGGCACGCACGCGCACTCGCTCGAGAATCCGGCGGGTGGGACTGAAAAAACAAAACAAAAAAAAGCAGATCGATTTTGTCATCTGCGGCGCAAAGCGGGTGTGCATTTCTTTTCTTTTATCCCCACATCCAGTCACCGTGACGTGGTTCTTGATTCCTCAGGCCGGGCGATTATTCTAGCTCTAGTTGGGATGATTGGATTGGATCCCCAGCCAGCAGCAGCAAGCAATTCTTGGCCATCGGTTGTGGGTGGCTGTTGATTCATGCATCACGAGCACTCAATAAAGTATGCAGATCTGTGCGCCCCTCTCTGATTTGTTCATCCAGGCAAAAGAGTATCTTGCTTCTGTGAGGATACTAAAGCGTGAAGTGTTGGGGGTTAGCTTTTGATTGAAGCCATCGAAAATTTTCCAGTGAACTTTCAGGCCCTGCTGAAAGAAGAATCTACTGAAAGAGGGAAGATTCGTAACCTTGGAAGATATGCTGCCTTACTTTGATCCGGAGTATGAGAACTTCAGTCAGCGCATCAACCCTCCTAGGGTATGCATTGACAACAGCACCTGCAGCGACTGCACCTTAGTGAAGGTCGACAGCATGAACAAGAATGGCATCCTGTTGGAGGTGGTGCAAGTTCTGAGCGATCTCGATCTCGCCATCTCGAAGGCGTACATCACCTCTGATGGTGGATGGTTCATGGATGTGTTTCATGTGGTGGACAAGCAAGGGCAGAAGGTGACTGATGAGAAGACCATTAAGCACATTGAGAAGGCGTTAGGCCCAGACAGCAACCTGCTGGGTGGCGCGAAGGGCGGGTCGTCGCCGGTGAGGTCGGTGGGGATGCACTCCATCGGCGACCACACCGCCATCGAGCTCAAGGGGCCCGACCGGACGGGCCTCCTCTCCGAGGTCTTCGCCGTGCTCGCCGAGCTCGGCTGCAACGTGCTCGCCGCCGAGGTGTGGACGCACCGCGCCCGCGTCGCCTGCGTCGTGTACGTGAACGACGTCGCGTCGGGGCAGGCCGTCGGCGACCCGTGCCGCCTGTCCCGGATCGAGCACCGCCTCCGCCTCGTCCTCCGCGGCCACGCCGGCGGCGACGACGGCGACGGCGACGACGGCCCGGCGCACGCCAACTTCTTCTCCTCCGGCGGCGCCGGGTCGAACACCCACGTCGACCGGCGGCTCCACCAGTTGATGCACGCCGACGTGGACGCCGACGACGACGACGGCCTCGACAGCCGCGCCATCGTGTCGGGCGAGGCCGGGAACGCGGCGGCGGCGGAGGAGAGGCCGGTGGTGACGGTGGAGCACTGCGAGGAGAAGGACTACTCGGTGGTGAACGTCAAGTGCAGGGACAGGTCCAAGCTGCTGTTCGACATCGTGTGCACGCTCACCGACATGCACTACGTCGTCTCCCACGCCTCCGTCTCCTCCGACGGCATCTACGGCATCCAGGAGCTGTACATTCGTCGGAAGGATGGGCGCACGCTACAGAAGGACGAAGCAGGGAGGGTGATCAAGTGCCTTGAAGCGGCCATCTCCAGAAGAGTATCTGAGGGATTCACCCTGGAGCTGTGCGGCAGGGACAGGGTCGGGCTGCTGTCCGACGTGACGCGGGTGCTCAGGGAGCACGGCCTGACGGTGACGAGGGCCGACGTCACGACGGTCGGCGGCCAGGCCATCAACGTCTTCTACGTCCGCGACGCCTCCGGCGAGCCGGTGGACATGAAGACCATCGAGGGCCTCCGCGTCCAGGTCGGCCACACCGTCATGCTCAACGTCAAGAAGGTGCCCTCCTCCCCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCGCCAACAGCAAGTCGCCGGGGCAGCCTGCCTCCGGCGCCCTGTCCAGGACCAGCTTCTTCTCCTTCGGCAACCTCTTCGCCAAGCTCAGAGCATGATATAATTCACCTGAATCTCTGAAGAATTATGGTCCCTTTTTCGGGTTGCGCAAATCGCCATAAGGAGAAGGAGATTTCAGTTGAAATTTTAGAGTTTAGGGGGTGAGGGTGAGAAACTGCGTGTGGCATATGGCAGAAAAAGAAATTGCTGTTGTTGTATAGTCCATAAACCATAAGGAGCTCTACCTACCAGTGTAGGAAATGAGAAAAAAATGCTGGATCCATGGTGTTGGTTCTGTTCTGTGCAATGCAGATTGCAGAATGCAGACTGCTCTTGAGTTGCATGAATGAGCTTTTTGAGCTATCTGTTCATCTTTTGTACAGCATCTTTCTAGCAGAAGCTCAAAG]
[+] EMBL AK100703 [GAAAAGGTCTTCTCAAGATTCAGTCATGGCGATCGCCGCAAGCAGGGCCAACGCCAACGCCAACCGAAGCCGCCACCATCATCAACCGAGGCGGTGGGAAAAAAATTCCTCCCAATGCTGGCACGCACGCGCACTCGCTCGAGAATCCGGCGGGTGGGACTGAAAAAACAAAACAAAAAAAAGCAGATCGATTTTGTCATCTGCGGCGCAAAGCGGGTGTGCATTTCTTTTCTTTTATCCCCACATCCAGTCACCGTGACGTGGTTCTTGATTCCTCAGGCCGGGCGATTATTCTAGCTCTAGTTGGGATGATTGGATTGGATCCCCAGCCAGCAGCAGCAAGCAATTCTTGGCCATCGGTTGTGGGTGGCTGTTGATTCATGCATCACGAGCACTCAATAAAGTATGCAGATCTGTGCGCCCCTCTCTGATTTGTTCATCCAGGCAAAAGAGTATCTTGCTTCTGTGAGGATACTAAAGCGTGAAGTGTTGGGGGTTAGCTTTTGATTGAAGCCATCGAAAATTTTCCAGTGAACTTTCAGGCCCTGCTGAAAGAAGAATCTACTGAAAGAGGGAAGATTCGTAACCTTGGAAGATATGCTGCCTTACTTTGATCCGGAGTATGAGAACTTCAGTCAGCGCATCAACCCTCCTAGGGTATGCATTGACAACAGCACCTGCAGCGACTGCACCTTAGTGAAGGTCGACAGCATGAACAAGAATGGCATCCTGTTGGAGGTGGTGCAAGTTCTGAGCGATCTCGATCTCGCCATCTCGAAGGCGTACATCACCTCTGATGGTGGATGGTTCATGGATGTGTTTCATGTGGTGGACAAGCAAGGGCAGAAGGTGACTGATGAGAAGACCATTAAGCACATTGAGAAGGCGTTAGGCCCAGACAGCAACCTGCTGGGTGGCGCGAAGGGCGGGTCGTCGCCGGTGAGGTCGGTGGGGATGCACTCCATCGGCGACCACACCGCCATCGAGCTCAAGGGGCCCGACCGGACGGGCCTCCTCTCCGAGGTCTTCGCCGTGCTCGCCGAGCTCGGCTGCAACGTGCTCGCCGCCGAGGTGTGGACGCACCGCGCCCGCGTCGCCTGCGTCGTGTACGTGAACGACGTCGCGTCGGGGCAGGCCGTCGGCGACCCGTGCCGCCTGTCCCGGATCGAGCACCGCCTCCGCCTCGTCCTCCGCGGCCACGCCGGCGGCGACGACGGCGACGGCGACGACGGCCCGGCGCACGCCAACTTCTTCTCCTCCGGCGGCGCCGGGTCGAACACCCACGTCGACCGGCGGCTCCACCAGTTGATGCACGCCGACGTGGACGCCGACGACGACGACGGCCTCGACAGCCGCGCCATCGTGTCGGGCGAGGCCGGGAACGCGGCGGCGGCGGAGGAGAGGCCGGTGGTGACGGTGGAGCACTGCGAGGAGAAGGACTACTCGGTGGTGAACGTCAAGTGCAGGGACAGGTCCAAGCTGCTGTTCGACATCGTGTGCACGCTCACCGACATGCACTACGTCGTCTCCCACGCCTCCGTCTCCTCCGACGGCATCTACGGCATCCAGGAGCTGTACATTCGTCGGAAGGATGGGCGCACGCTACAGAAGGACGAAGCAGGGAGGGTGATCAAGTGCCTTGAAGCGGCCATCTCCAGAAGAGTATCTGAGGGATTCACCCTGGAGCTGTGCGGCAGGGACAGGGTCGGGCTGCTGTCCGACGTGACGCGGGTGCTCAGGGAGCACGGCCTGACGGTGACGAGGGCCGACGTCACGACGGTCGGCGGCCAGGCCATCAACGTCTTCTACGTCCGCGACGCCTCCGGCGAGCCGGTGGACATGAAGACCATCGAGGGCCTCCGCGTCCAGGTCGGCCACACCGTCATGCTCAACGTCAAGAAGGTGCCCTCCTCCCCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCGCCAACAGCAAGTCGCCGGGGCAGCCTGCCTCCGGCGCCCTGTCCAGGACCAGCTTCTTCTCCTTCGGCAACCTCTTCGCCAAGCTCAGAGCATGATATAATTCACCTGAATCTCTGAAGAATTATGGTCCCTTTTTCGGGTTGCGCAAATCGCCATAAGGAGAAGGAGATTTCAGTTGAAATTTTAGAGTTTAGGGGGTGAGGGTGAGAAACTGCGTGTGGCATATGGCAGAAAAAGAAATTGCTGTTGTTGTATAGTCCATAAACCATAAGGAGCTCTACCTACCAGTGTAGGAAATGAGAAAAAAATGCTGGATCCATGGTGTTGGTTCTGTTCTGTGCAATGCAGATTGCAGAATGCAGACTGCTCTTGAGTTGCATGAATGAGCTTTTTGAGCTATCTGTTCATCTTTTGTACAGCATCTTTCTAGCAGAAGCTCAAAG]
consensusID : consensus_5748#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2221 fasta sequence
[CTCTTTCCCTGTCATCTCTCCCCTACTAGGCCCATTTGCCCTCTCCCCCCTCCATCCATCCATCCATTCATCCATATCTCCCTTCCTTTTGCCGTCCCTTTTTCTTGATTTGATTCTTCTTCCTCCCATGGTCTCTCCTCTTCTCTCCCCTTCCTTACACTAACAGAGAGCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTCAGCTAGCCGTGCTCCGGCTGCGTGAGATGTAAGACGACGCGCGAATCAAAAATCTCAAAATCTCAAGAAGCCAAGAACAGCAGCAGCAAGTAGAAGGAAAAAGGAGGAGAGAATTAAGAGGGAATCCAAGAACAGTGGATACTAAAGCGTGAAGTGTTGGGGGTTAGCTTTTGATTGAAGCCATCGAAAATTTTCCAGTGAACTTTCAGGCCCTGCTGAAAGAAGAATCTACTGAAAGAGGGAAGATTCGTAACCTTGGAAGATATGCTGCCTTACTTTGATCCGGAGTATGAGAACTTCAGTCAGCGCATCAACCCTCCTAGGGTATGCATTGACAACAGCACCTGCAGCGACTGCACCTTAGTGAAGGTCGACAGCATGAACAAGAATGGCATCCTGTTGGAGGTGGTGCAAGTTCTGAGCGATCTCGATCTCGCCATCTCGAAGGCGTACATCACCTCTGATGGTGGATGGTTCATGGATGTGTTTCATGTGGTGGACAAGCAAGGGCAGAAGGTGACTGATGAGAAGACCATTAAGCACATTGAGAAGGCGTTAGGCCCAGACAGCAACCTGCTGGGTGGCGCGAAGGGCGGGTCGTCGCCGGTGAGGTCGGTGGGGATGCACTCCATCGGCGACCACACCGCCATCGAGCTCAAGGGGCCCGACCGGACGGGCCTCCTCTCCGAGGTCTTCGCCGTGCTCGCCGAGCTCGGCTGCAACGTGCTCGCCGCCGAGGTGTGGACGCACCGCGCCCGCGTCGCCTGCGTCGTGTACGTGAACGACGTCGCGTCGGGGCAGGCCGTCGGCGACCCGTGCCGCCTGTCCCGGATCGAGCACCGCCTCCGCCTCGTCCTCCGCGGCCACGCCGGCGGCGACGACGGCGACGGCGACGACGGCCCGGCGCACGCCAACTTCTTCTCCTCCGGCGGCGCCGGGTCGAACACCCACGTCGACCGGCGGCTCCACCAGTTGATGCACGCCGACGTGGACGCCGACGACGACGACGGCCTCGACAGCCGCGCCATCGTGTCGGGCGAGGCCGGGAACGCGGCGGCGGCGGAGGAGAGGCCGGTGGTGACGGTGGAGCACTGCGAGGAGAAGGACTACTCGGTGGTGAACGTCAAGTGCAGGGACAGGTCCAAGCTGCTGTTCGACATCGTGTGCACGCTCACCGACATGCACTACGTCGTCTCCCACGCCTCCGTCTCCTCCGACGGCATCTACGGCATCCAGGAGCTGTACATTCGTCGGAAGGATGGGCGCACGCTACAGAAGGACGAAGCAGGGAGGGTGATCAAGTGCCTTGAAGCGGCCATCTCCAGAAGAGTATCTGAGGGATTCACCCTGGAGCTGTGCGGCAGGGACAGGGTCGGGCTGCTGTCCGACGTGACGCGGGTGCTCAGGGAGCACGGCCTGACGGTGACGAGGGCCGACGTCACGACGGTCGGCGGCCAGGCCATCAACGTCTTCTACGTCCGCGACGCCTCCGGCGAGCCGGTGGACATGAAGACCATCGAGGGCCTCCGCGTCCAGGTCGGCCACACCGTCATGCTCAACGTCAAGAAGGTGCCCTCCTCCCCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCGCCAACGGCAAGTCGCCGGGGCAGCCTGCCTCCGGCGCCCTGTCCAGGACCAGCTTCTTCTCCTTCGGCAACCTCTTCGCCAAGCTCAGAGCATGATATAATTCACCTGAATCTCTGAAGAATTATGGTCCCTTTTTCGGGTTGCGCAAATCGCCATAAGGAGAAGGAGATTTCAGTTGAAATTTTAGAGTTTAGGGGGTGAGGGTGAGAAACTGCGTGTGGCATATGGCAGAAAAAGAAATTGCTGTTGTTGTATAGTCCATAAACCATAAGGAGCTCTACCTACCAGTGTAGGAAATGAGAAAAAAATGCTGGATCCATGGTGTTGGTTCTGTTCTGTGCAATGCAGATTGCAGAATGCAGACTGCTCTT]
[+] EMBL AK072247 [CTCTTTCCCTGTCATCTCTCCCCTACTAGGCCCATTTGCCCTCTCCCCCCTCCATCCATCCATCCATTCATCCATATCTCCCTTCCTTTTGCCGTCCCTTTTTCTTGATTTGATTCTTCTTCCTCCCATGGTCTCTCCTCTTCTCTCCCCTTCCTTACACTAACAGAGAGCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTCAGCTAGCCGTGCTCCGGCTGCGTGAGATGTAAGACGACGCGCGAATCAAAAATCTCAAAATCTCAAGAAGCCAAGAACAGCAGCAGCAAGTAGAAGGAAAAAGGAGGAGAGAATTAAGAGGGAATCCAAGAACAGTGGATACTAAAGCGTGAAGTGTTGGGGGTTAGCTTTTGATTGAAGCCATCGAAAATTTTCCAGTGAACTTTCAGGCCCTGCTGAAAGAAGAATCTACTGAAAGAGGGAAGATTCGTAACCTTGGAAGATATGCTGCCTTACTTTGATCCGGAGTATGAGAACTTCAGTCAGCGCATCAACCCTCCTAGGGTATGCATTGACAACAGCACCTGCAGCGACTGCACCTTAGTGAAGGTCGACAGCATGAACAAGAATGGCATCCTGTTGGAGGTGGTGCAAGTTCTGAGCGATCTCGATCTCGCCATCTCGAAGGCGTACATCACCTCTGATGGTGGATGGTTCATGGATGTGTTTCATGTGGTGGACAAGCAAGGGCAGAAGGTGACTGATGAGAAGACCATTAAGCACATTGAGAAGGCGTTAGGCCCAGACAGCAACCTGCTGGGTGGCGCGAAGGGCGGGTCGTCGCCGGTGAGGTCGGTGGGGATGCACTCCATCGGCGACCACACCGCCATCGAGCTCAAGGGGCCCGACCGGACGGGCCTCCTCTCCGAGGTCTTCGCCGTGCTCGCCGAGCTCGGCTGCAACGTGCTCGCCGCCGAGGTGTGGACGCACCGCGCCCGCGTCGCCTGCGTCGTGTACGTGAACGACGTCGCGTCGGGGCAGGCCGTCGGCGACCCGTGCCGCCTGTCCCGGATCGAGCACCGCCTCCGCCTCGTCCTCCGCGGCCACGCCGGCGGCGACGACGGCGACGGCGACGACGGCCCGGCGCACGCCAACTTCTTCTCCTCCGGCGGCGCCGGGTCGAACACCCACGTCGACCGGCGGCTCCACCAGTTGATGCACGCCGACGTGGACGCCGACGACGACGACGGCCTCGACAGCCGCGCCATCGTGTCGGGCGAGGCCGGGAACGCGGCGGCGGCGGAGGAGAGGCCGGTGGTGACGGTGGAGCACTGCGAGGAGAAGGACTACTCGGTGGTGAACGTCAAGTGCAGGGACAGGTCCAAGCTGCTGTTCGACATCGTGTGCACGCTCACCGACATGCACTACGTCGTCTCCCACGCCTCCGTCTCCTCCGACGGCATCTACGGCATCCAGGAGCTGTACATTCGTCGGAAGGATGGGCGCACGCTACAGAAGGACGAAGCAGGGAGGGTGATCAAGTGCCTTGAAGCGGCCATCTCCAGAAGAGTATCTGAGGGATTCACCCTGGAGCTGTGCGGCAGGGACAGGGTCGGGCTGCTGTCCGACGTGACGCGGGTGCTCAGGGAGCACGGCCTGACGGTGACGAGGGCCGACGTCACGACGGTCGGCGGCCAGGCCATCAACGTCTTCTACGTCCGCGACGCCTCCGGCGAGCCGGTGGACATGAAGACCATCGAGGGCCTCCGCGTCCAGGTCGGCCACACCGTCATGCTCAACGTCAAGAAGGTGCCCTCCTCCCCCTCCTCCTCCTCCGCCGCCGCCGCCGCCGCCGCCAACGGCAAGTCGCCGGGGCAGCCTGCCTCCGGCGCCCTGTCCAGGACCAGCTTCTTCTCCTTCGGCAACCTCTTCGCCAAGCTCAGAGCATGATATAATTCACCTGAATCTCTGAAGAATTATGGTCCCTTTTTCGGGTTGCGCAAATCGCCATAAGGAGAAGGAGATTTCAGTTGAAATTTTAGAGTTTAGGGGGTGAGGGTGAGAAACTGCGTGTGGCATATGGCAGAAAAAGAAATTGCTGTTGTTGTATAGTCCATAAACCATAAGGAGCTCTACCTACCAGTGTAGGAAATGAGAAAAAAATGCTGGATCCATGGTGTTGGTTCTGTTCTGTGCAATGCAGATTGCAGAATGCAGACTGCTCTT]
consensusID : consensus_5748#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 477 fasta sequence
[GCTCGGCGACCGTGAAAGAGACATGGAGGCTCGGGTCCAGTCGCAAACGTCATGTCAACGTCAAGAAGNGCCTTCNTCCCCATCATCNTCNTCNTCAGCCGCNGCCGCCAANNGCAAGTCGCCGGGGCAGCAGCTTCNGGCGCCCTGTCCAGGACCAGNTTCNTTCTCCNTCGGCAACNTNTTCACCAAGCTCAGAGCATGATATAATTCACCTGAATNTNTGAAGAATTATGGTCCCTTTTTCGGGTTGCGCAAATCGCCATAAGGAGAAGGAGATTTCAGTTGAAATTTTAGAGTTTAGTGGGTGAGGGTGAGCAACTGCGTGTGGCATATGGCAGAAAAAGAAATTGCNGTTGTTGTATAGTCCATAAACCATAAGGAGCTNTACCTACCAGTGTAGGAAATGAGAAAAAAATGCTGGATCCATGGTGTTGGTTCTGTTCTGTGCAATGCAGATTGCAGAATGCAAAAAAAAAA]
[-] EMBL AA752134 [GCTCGGCGACCGTGAAAGAGACATGGAGGCTCGGGTCCAGTCGCAAACGTCATGTCAACGTCAAGAAGNGCCTTCNTCCCCATCATCNTCNTCNTCAGCCGCNGCCGCCAANNGCAAGTCGCCGGGGCAGCAGCTTCNGGCGCCCTGTCCAGGACCAGNTTCNTTCTCCNTCGGCAACNTNTTCACCAAGCTCAGAGCATGATATAATTCACCTGAATNTNTGAAGAATTATGGTCCCTTTTTCGGGTTGCGCAAATCGCCATAAGGAGAAGGAGATTTCAGTTGAAATTTTAGAGTTTAGTGGGTGAGGGTGAGCAACTGCGTGTGGCATATGGCAGAAAAAGAAATTGCNGTTGTTGTATAGTCCATAAACCATAAGGAGCTNTACCTACCAGTGTAGGAAATGAGAAAAAAATGCTGGATCCATGGTGTTGGTTCTGTTCTGTGCAATGCAGATTGCAGAATGCAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_5748#1 ------------------------------------------------------------
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 GAAAAGGTCTTCTCAAGATTCAGTCATGGCGATCGCCGCAAGCAGGGCCAACGCCAACGC 60
consensus_5748#1 -------------------------------CTCTTTCCCTGTCATCTCTCCCCTACTAG 29
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 CAACCGAAGCCGCCACCATCATCAACCGAGGCGGTGGGAAAAAAATTCCTCCCAATGCTG 120
consensus_5748#1 GCCCATTTGCCCTCTCCCCCCTCCATCCATCCATCCATTCATCCATATCTCCCTTCCTTT 89
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 GCACGCACGCGCACTCGCTCGAGAATCCGGCGGGTGGGACTGAAAAAACAAAACAAAAAA 180
consensus_5748#1 TGCCGTCCCTTTTTCTTGATTTGATTCTTCTTCCTCCCATGG---TCTCTCCTCTTCTCT 146
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 AAGCAGATCGATTTTGTCATCTGCGGCGCAAAGCGGGTGTGCATTTCTTTTCTTTTATCC 240
consensus_5748#1 CCCCTTCCTTACACTAACAGAGAGCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC 206
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 CCACATCCAGTCACCGTGACGTGGTTCTTGATTCCTCAGGCCGGGCGATTATTCTAGCTC 300
consensus_5748#1 TTCTTCTTCTTCTTCTTCTTCTTCCTCT-----CAGCTAGCCGTGCTCCGGCTGCGTGAG 261
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 TAGTTGGGATGATTGGATTGGATCCCCAGCCAGCAGCAGCAAGCAATTCTTGGCCATCGG 360
consensus_5748#1 ATGTAAGACGACGCGCGAATCAAAAATCTCAAAATCTCAAGAAGCCAAGAACAGCAGCAG 321
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 TTGTGGG-TGGCTGTTGATTCATGCATCACGAGCACTCAATAAAGTATGCAGATCTGTGC 419
consensus_5748#1 CAAGTAGAAGGAAAAAGGAGGAGAGAATTAAGAGGGAATCCAAGAACAGTGGATACTAAA 381
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 GCCCCTCTCTGATTTGTTCATCCAGGCAAAAGAGTATCTTGCTTCTGTGAGGATACTAAA 479
consensus_5748#1 GCGTGAAGTGTTGGGGGTTAGCTTTTGATTGAAGCCATCGAAAATTTTCCAGTGAACTTT 441
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 GCGTGAAGTGTTGGGGGTTAGCTTTTGATTGAAGCCATCGAAAATTTTCCAGTGAACTTT 539
consensus_5748#1 CAGGCCCTGCTGAAAGAAGAATCTACTGAAAGAGGGAAGATTCGTAACCTTGGAAGATAT 501
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 CAGGCCCTGCTGAAAGAAGAATCTACTGAAAGAGGGAAGATTCGTAACCTTGGAAGATAT 599
consensus_5748#1 GCTGCCTTACTTTGATCCGGAGTATGAGAACTTCAGTCAGCGCATCAACCCTCCTAGGGT 561
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 GCTGCCTTACTTTGATCCGGAGTATGAGAACTTCAGTCAGCGCATCAACCCTCCTAGGGT 659
consensus_5748#1 ATGCATTGACAACAGCACCTGCAGCGACTGCACCTTAGTGAAGGTCGACAGCATGAACAA 621
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 ATGCATTGACAACAGCACCTGCAGCGACTGCACCTTAGTGAAGGTCGACAGCATGAACAA 719
consensus_5748#1 GAATGGCATCCTGTTGGAGGTGGTGCAAGTTCTGAGCGATCTCGATCTCGCCATCTCGAA 681
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 GAATGGCATCCTGTTGGAGGTGGTGCAAGTTCTGAGCGATCTCGATCTCGCCATCTCGAA 779
consensus_5748#1 GGCGTACATCACCTCTGATGGTGGATGGTTCATGGATGTGTTTCATGTGGTGGACAAGCA 741
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 GGCGTACATCACCTCTGATGGTGGATGGTTCATGGATGTGTTTCATGTGGTGGACAAGCA 839
consensus_5748#1 AGGGCAGAAGGTGACTGATGAGAAGACCATTAAGCACATTGAGAAGGCGTTAGGCCCAGA 801
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 AGGGCAGAAGGTGACTGATGAGAAGACCATTAAGCACATTGAGAAGGCGTTAGGCCCAGA 899
consensus_5748#1 CAGCAACCTGCTGGGTGGCGCGAAGGGCGGGTCGTCGCCGGTGAGGTCGGTGGGGATGCA 861
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 CAGCAACCTGCTGGGTGGCGCGAAGGGCGGGTCGTCGCCGGTGAGGTCGGTGGGGATGCA 959
consensus_5748#1 CTCCATCGGCGACCACACCGCCATCGAGCTCAAGGGGCCCGACCGGACGGGCCTCCTCTC 921
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 CTCCATCGGCGACCACACCGCCATCGAGCTCAAGGGGCCCGACCGGACGGGCCTCCTCTC 1019
consensus_5748#1 CGAGGTCTTCGCCGTGCTCGCCGAGCTCGGCTGCAACGTGCTCGCCGCCGAGGTGTGGAC 981
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 CGAGGTCTTCGCCGTGCTCGCCGAGCTCGGCTGCAACGTGCTCGCCGCCGAGGTGTGGAC 1079
consensus_5748#1 GCACCGCGCCCGCGTCGCCTGCGTCGTGTACGTGAACGACGTCGCGTCGGGGCAGGCCGT 1041
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 GCACCGCGCCCGCGTCGCCTGCGTCGTGTACGTGAACGACGTCGCGTCGGGGCAGGCCGT 1139
consensus_5748#1 CGGCGACCCGTGCCGCCTGTCCCGGATCGAGCACCGCCTCCGCCTCGTCCTCCGCGGCCA 1101
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 CGGCGACCCGTGCCGCCTGTCCCGGATCGAGCACCGCCTCCGCCTCGTCCTCCGCGGCCA 1199
consensus_5748#1 CGCCGGCGGCGACGACGGCGACGGCGACGACGGCCCGGCGCACGCCAACTTCTTCTCCTC 1161
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 CGCCGGCGGCGACGACGGCGACGGCGACGACGGCCCGGCGCACGCCAACTTCTTCTCCTC 1259
consensus_5748#1 CGGCGGCGCCGGGTCGAACACCCACGTCGACCGGCGGCTCCACCAGTTGATGCACGCCGA 1221
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 CGGCGGCGCCGGGTCGAACACCCACGTCGACCGGCGGCTCCACCAGTTGATGCACGCCGA 1319
consensus_5748#1 CGTGGACGCCGACGACGACGACGGCCTCGACAGCCGCGCCATCGTGTCGGGCGAGGCCGG 1281
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 CGTGGACGCCGACGACGACGACGGCCTCGACAGCCGCGCCATCGTGTCGGGCGAGGCCGG 1379
consensus_5748#1 GAACGCGGCGGCGGCGGAGGAGAGGCCGGTGGTGACGGTGGAGCACTGCGAGGAGAAGGA 1341
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 GAACGCGGCGGCGGCGGAGGAGAGGCCGGTGGTGACGGTGGAGCACTGCGAGGAGAAGGA 1439
consensus_5748#1 CTACTCGGTGGTGAACGTCAAGTGCAGGGACAGGTCCAAGCTGCTGTTCGACATCGTGTG 1401
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 CTACTCGGTGGTGAACGTCAAGTGCAGGGACAGGTCCAAGCTGCTGTTCGACATCGTGTG 1499
consensus_5748#1 CACGCTCACCGACATGCACTACGTCGTCTCCCACGCCTCCGTCTCCTCCGACGGCATCTA 1461
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 CACGCTCACCGACATGCACTACGTCGTCTCCCACGCCTCCGTCTCCTCCGACGGCATCTA 1559
consensus_5748#1 CGGCATCCAGGAGCTGTACATTCGTCGGAAGGATGGGCGCACGCTACAGAAGGACGAAGC 1521
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 CGGCATCCAGGAGCTGTACATTCGTCGGAAGGATGGGCGCACGCTACAGAAGGACGAAGC 1619
consensus_5748#1 AGGGAGGGTGATCAAGTGCCTTGAAGCGGCCATCTCCAGAAGAGTATCTGAGGGATTCAC 1581
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 AGGGAGGGTGATCAAGTGCCTTGAAGCGGCCATCTCCAGAAGAGTATCTGAGGGATTCAC 1679
consensus_5748#1 CCTGGAGCTGTGCGGCAGGGACAGGGTCGGGCTGCTGTCCGACGTGACGCGGGTGCTCAG 1641
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 CCTGGAGCTGTGCGGCAGGGACAGGGTCGGGCTGCTGTCCGACGTGACGCGGGTGCTCAG 1739
consensus_5748#1 GGAGCACGGCCTGACGGTGACGAGGGCCGACGTCACGACGGTCGGCGGCCAGGCCATCAA 1701
consensus_5748#2 ------------------------------------------------------------
consensus_5748#0 GGAGCACGGCCTGACGGTGACGAGGGCCGACGTCACGACGGTCGGCGGCCAGGCCATCAA 1799
consensus_5748#1 CGTCTTCTACGTCCGCGACGCCTCCGGCGAGCCGGTGGACATGAAGACCATCGAGGGCCT 1761
consensus_5748#2 -----------------------------GCTCGGCGACCGTGAAAGAGACATGGAGGCT 31
consensus_5748#0 CGTCTTCTACGTCCGCGACGCCTCCGGCGAGCCGGTGGACATGAAGACCATCGAGGGCCT 1859
*** * * **** * * * **
consensus_5748#1 CCGCGTCCAGGTCGGCCACACCGTCATGCTCAACGTCAAGAAGGTGCCCTCCTCCCCCTC 1821
consensus_5748#2 CGG-GTCCAG-TCG--CAAAC-GTCATG-TCAACGTCAAGAAGN-GCCTTCNTCCCCATC 84
consensus_5748#0 CCGCGTCCAGGTCGGCCACACCGTCATGCTCAACGTCAAGAAGGTGCCCTCCTCCCCCTC 1919
* * ****** *** ** ** ****** ************** *** ** ***** **
consensus_5748#1 CTCCTCCTCCGCCGCCGCCGCCGCCGCCGCCAACGGCAAGTCGCCGGGGCAGCCTGCCTC 1881
consensus_5748#2 ATCNTCNTCNTCAGCCGCNGCCGCC------AANNGCAAGTCGCCGGGGCAGCA-GCTTC 137
consensus_5748#0 CTCCTCCTCCGCCGCCGCCGCCGCCGCCGCCAACAGCAAGTCGCCGGGGCAGCCTGCCTC 1979
** ** ** * ***** ****** ** ****************** ** **
consensus_5748#1 CGGCGCCCTGTCCAGGACCAGCTTCTT-CTCCTTCGGCAACCTCTTCGCCAAGCTCAGAG 1940
consensus_5748#2 NGGCGCCCTGTCCAGGACCAGNTTCNTTCTCCNTCGGCAACNTNTTCACCAAGCTCAGAG 197
consensus_5748#0 CGGCGCCCTGTCCAGGACCAGCTTCTT-CTCCTTCGGCAACCTCTTCGCCAAGCTCAGAG 2038
******************** *** * **** ******** * *** ************
consensus_5748#1 CATGATATAATTCACCTGAATCTCTGAAGAATTATGGTCCCTTTTTCGGGTTGCGCAAAT 2000
consensus_5748#2 CATGATATAATTCACCTGAATNTNTGAAGAATTATGGTCCCTTTTTCGGGTTGCGCAAAT 257
consensus_5748#0 CATGATATAATTCACCTGAATCTCTGAAGAATTATGGTCCCTTTTTCGGGTTGCGCAAAT 2098
********************* * ************************************
consensus_5748#1 CGCCATAAGGAGAAGGAGATTTCAGTTGAAATTTTAGAGTTTAGGGGGTGAGGGTGAGAA 2060
consensus_5748#2 CGCCATAAGGAGAAGGAGATTTCAGTTGAAATTTTAGAGTTTAGTGGGTGAGGGTGAGCA 317
consensus_5748#0 CGCCATAAGGAGAAGGAGATTTCAGTTGAAATTTTAGAGTTTAGGGGGTGAGGGTGAGAA 2158
******************************************** ************* *
consensus_5748#1 ACTGCGTGTGGCATATGGCAGAAAAAGAAATTGCTGTTGTTGTATAGTCCATAAACCATA 2120
consensus_5748#2 ACTGCGTGTGGCATATGGCAGAAAAAGAAATTGCNGTTGTTGTATAGTCCATAAACCATA 377
consensus_5748#0 ACTGCGTGTGGCATATGGCAGAAAAAGAAATTGCTGTTGTTGTATAGTCCATAAACCATA 2218
********************************** *************************
consensus_5748#1 AGGAGCTCTACCTACCAGTGTAGGAAATGAGAAAAAAATGCTGGATCCATGGTGTTGGTT 2180
consensus_5748#2 AGGAGCTNTACCTACCAGTGTAGGAAATGAGAAAAAAATGCTGGATCCATGGTGTTGGTT 437
consensus_5748#0 AGGAGCTCTACCTACCAGTGTAGGAAATGAGAAAAAAATGCTGGATCCATGGTGTTGGTT 2278
******* ****************************************************
consensus_5748#1 CTGTTCTGTGCAATGCAGATTGCAGAATGCAGACTGCTCTT------------------- 2221
consensus_5748#2 CTGTTCTGTGCAATGCAGATTGCAGAATGCAAAAAAAAAA-------------------- 477
consensus_5748#0 CTGTTCTGTGCAATGCAGATTGCAGAATGCAGACTGCTCTTGAGTTGCATGAATGAGCTT 2338
******************************* *
consensus_5748#1 -----------------------------------------------------
consensus_5748#2 -----------------------------------------------------
consensus_5748#0 TTTGAGCTATCTGTTCATCTTTTGTACAGCATCTTTCTAGCAGAAGCTCAAAG 2391
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||