cluster # 5779

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Oryza sativa
cluster # 5779 cluster # 5779 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5779#0 length = 545 sequences # 3

consensusID : consensus_5779#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 545
fasta sequence

                              [CACCAGCAAGATCTTTNCCCTNTNTGCCTTAATTGCTCTTTCTGCAAGTG-CCACTACTGCAATCACCACTATGCAGTATTTCCCACCAACATTAGCCATGGG-ACCATGGATCCGTGTAGGCAGTACATGATGCAAACGTTGGGCATGGGTAGCTCCACAGCCATGTTCATGTCGCAGCCAATGG-GCTCCTGCAGCAGCAATGTTGCATGCAGCTACAAGGCAT-NATGCCTTCCAGGTGCCCACTGTGGCACCCATTGCCCAGATGAATGCCAGAAGCAATGCCAACCAAGTTAATTTGTGCTGGAACTCTCGGGCCAACCAACCAAGAATGAATGGAAGGATGGCCGAATTCCAAGAATTCCCATACAATTGGTGCAAACAATGGGCCCCCTGTCAACTTCCCAAACTCTCTTTCCTGTGGTTGTTTGTTGATCAAACGTTGGTTACATGTACTCTAGTAATAAGGTGTTGCATACTATCGTGTGCAACACTAGAAATAAGAACCTTGAATAAAATATCATCATTTTCAGACTTGCAAAAAAAAA]

[+] EMBL OSC040               [CACCAGCAAGATCTTTNCCCTNTNTGCCTTAATTGCTNTTNCTGCAAGTG CCACTACTGCAATCACCACTATGCAGTATTTCCCACCAACATTAGCCATGGG ACCATNGATCCGTGTAGGCAGTACATGATGCAAACGTTGGGCATGGGTAGCTCCACAGCCATGTTCATGTCGCAGCCAATGG GCTCCTGCAGCAGCAATGTTGCATGCAGCTACAAGGCAT NATGCCT                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AA750807             [                                   CTCTTTCTGCAAGTG CCACTACTGCAATCACCACTCTGCAGTATTTCCCACCAACATTAGCCAT  G ACCATGGATCCGTGTAGGCAGTACATGATGCAAACGTTGGGCATGGGTAGCTCCACAGCCATGTTCATGTNG AGCCAATGG GCTCCTGCAGCAGCAATGTTGCAT                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BI799338             [                                     CTTTCTGCAAGTGCCCACTACTGCAATCACCACTATGCAGTATTTCCCACCAACATTAGCCATGGGCACCATGGATCCGTGTA GCAGTACATGATGCAAACGTTGGGCATGGGTAGCTCCACAGCCATGTTCATGTCGCAGCCAATGGCGCTCCTGCAGCAGCAATGTTGCAAGCAGCTACAAGGCATGAATGCCCTCCAGGTGCCCACTGTGGCACCCATTGCCCAGATGAATGCCAGAAGCAATGCCAACCAAGTTAATTTGTGCTGGAACTCTCGGGCCAACCAACCAAGAATGAATGGAAGGATGGCCGAATTCCAAGAATTCCCATACAATTGGTGCAAACAATGGGCCCCCTGTCAACTTCCCAAACTCTCTTTCCTGTGGTTGTTTGTTGATCAAACGTTGGTTACATGTACTCTAGTAATAAGGTGTTGCATACTATCGTGTGCAACACTAGAAATAAGAACCTTGAATAAAATATCATCATTTTCAGACTTGCAAAAAAAAA]




>consensus_5779#0
CACCAGCAAGATCTTTNCCCTNTNTGCCTTAATTGCTCTTTCTGCAAGTGCCACTACTGC
AATCACCACTATGCAGTATTTCCCACCAACATTAGCCATGGGACCATGGATCCGTGTAGG
CAGTACATGATGCAAACGTTGGGCATGGGTAGCTCCACAGCCATGTTCATGTCGCAGCCA
ATGGGCTCCTGCAGCAGCAATGTTGCATGCAGCTACAAGGCATNATGCCTTCCAGGTGCC
CACTGTGGCACCCATTGCCCAGATGAATGCCAGAAGCAATGCCAACCAAGTTAATTTGTG
CTGGAACTCTCGGGCCAACCAACCAAGAATGAATGGAAGGATGGCCGAATTCCAAGAATT
CCCATACAATTGGTGCAAACAATGGGCCCCCTGTCAACTTCCCAAACTCTCTTTCCTGTG
GTTGTTTGTTGATCAAACGTTGGTTACATGTACTCTAGTAATAAGGTGTTGCATACTATC
GTGTGCAACACTAGAAATAAGAACCTTGAATAAAATATCATCATTTTCAGACTTGCAAAA
AAAAA

clustalw multiple alignements is not computed in this case