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Oryza sativa
cluster # 5796 cluster # 5796       Sequences # 3       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5796#0 length = 758 sequences # 3  

consensusID : consensus_5796#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 758
fasta sequence
                              [GGATATAC-AGATTTCGATCGGC-GACGTTAGTGATCAGCTGGGTTAATTAATTAC-GTGGCTAATTAAGCTAGCTATAGCCATGAGCAAGAGGAGCAGGAGCATGTGGGACATGCAGGAGTTCGTCGGCAGCGTGGACACGGCCCGCGTGCTGATGC-TCCTCGCGCAGCAGAGCCAGCACGGCCTGCTGGGCGGCGGC-GGCTTCGCC-G-CCGGCGCGCAGCC-GGTGGT-GGTGC-GCGGCGGC-GC-GCAC-GACCGC-GTGTTCGAGTGCAAGACGTGCAACC-GGCAGTTCCCAACGTTCCAGGCGCTCGGGGGCCACCGCGCCAGCCACAAGCGGCCGAGGCAGCAGCAGCAGCACGCGCTCGGCGGCGGCGCCGGCGCCGACGACGTGGGGCTATGCCTCGGGAGGCAGCCGACGCCGCCGCGGCCGCAGCCGGCGAAGCCGAGGGTGCACGAGTGCCCCGTCTGCGGGCTCGAGTTCCCCATCGGGCAGGCGCTCGGCGGGCACATGCGTCGGCACCGCGCGGAGGCCGAGGCGGCGGCGACAACGACGACGACGACGACGAAGAACGGCGACGTAGGCAAGGCGGCGGCCGTGAAGGCCTGCGACGGCGGCGGTGTCTGCCTGGACTTGAACCTGACGCCGTCGGAGAACCGCGCAAAGTGCCGGAACGTGGTGGGTCTCGGCGCCGGCGGGCAGGGCGTACACAAGGCGCTCGCCATGTTGGATTGTTTCCTTTGAGCCGTTCAAACTGCACATATTATTG]

[+] EMBL BI798672             [GGATATACAAGATTTCGATCGGCAGACGTTAGTGATCAGCTGGGTTAATTAATTACAGTGGCTAATTAAGCTAGCTATAGCCATGAGCAAGAGGAGCAGGAGCATGTGGGACATGCAGGAGTTCGTCGGCAGCGTGGACACGGCCCGCGTGCTGATGC TCCTCGCGCAGCAGAGCCAGCACGGCCTGCTGGGCGGCGGCAGGCTTCGCCAGACCGGCGCGCAGCCAGGTGGTCGGTGCAGCGGCGGCAGCAGCACAGACCGCAGTGTTCGAGTGCAAGACGTGCAACCAGGCAGTTCCCAACGTTCCAGGCGCTCGGGGGCCACCGCGCCAGCCACAAGCGGCCGAGGCAGCAGCAGCAGCACGCGCTCGGCGGCGGCGCCGGCGCCGACGACGTGGGGCTATGCCTCGGGA GCAGCCG                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BI798998             [GGATATAC AGATTTCGATCGGC GACGTTAGTGATCAGCTGGGTTAATTAATTAC GTGGCTAATTAAGCTAGCTATAGCCATGAGCAAGAGGAGCAGGAGCATGTGGGACATGCAGGAGTTCGTCGGCAGCGTGGACACGGCCCGCGTGCTGATGCATCCTCGCGCAGCAGAGCCAGCACGGCCTGCTGGGCGGCGGC GGCTTCGCC G CCGGCGCGCAGCC GGTGGT GGTGC  CGGCGGC GC GCAC GACCGC GTGTTCGAGTGCAAGACGTGCAACC GGCAGTTCCCAACGTTCCAGGCGCTC GGGGCCACCGCGCCAGCCACAAGCGGCCGAGGCAGCAGCAGCAGCACGCGCTCGGC GCGGCGCCGGCCCCGACGACGTGGGGCTATGCCTCGGGAGGCAGCCGA                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AY266289             [                 ATCGGC GACGTTAGTGATCAGCTGGGTTAATTAATTAC GTGGCTAATTAAGCTAGCTATAGCCATGAGCAAGAGGAGCAGGACCATGTGGGACATGCAGGAGTTCGTCGGCAGCGTGGACACGGCCCGCGTGCTGATGC TCCTCGCGCAGCAGAGCCAGCACGGCCTGCTGGGCGGCGGC GGCTTCGCC G CCGGCGCGCAGCC GGTGGT GGTGC GCGGCGGC GC GCAC GACCGC GTGTTCGAGTGCAAGACGTGCAACC GGCAGTTCCCAACGTTCCAGGCGCTCGGGGGCCACCGCGCCAGCCACAAGCGGCCGAGGCAGCAGCAGCAGCACGCGCTCGGCGGCGGCGCCGGCGCCGACGACGTGGGGCTATGCCTCGGGAGGCAGCCGACGCCGCCGCGGCCGCAGCCGGCGAAGCCGAGGGTGCACGAGTGCCCCGTCTGCGGGCTCGAGTTCCCCATCGGGCAGGCGCTCGGCGGGCACATGCGTCGGCACCGCGCGGAGGCCGAGGCGGCGGCGACAACGACGACGACGACGACGAAGAACGGCGACGTAGGCAAGGCGGCGGCCGTGAAGGCCTGCGACGGCGGCGGTGTCTGCCTGGACTTGAACCTGACGCCGTCGGAGAACCGCGCAAAGTGCCGGAACGTGGTGGGTCTCGGCGCCGGCGGGCAGGGCGTACACAAGGCGCTCGCCATGTTGGATTGTTTCCTTTGAGCCGTTCAAACTGCACATATTATTG]


>consensus_5796#0 GGATATACAGATTTCGATCGGCGACGTTAGTGATCAGCTGGGTTAATTAATTACGTGGCT AATTAAGCTAGCTATAGCCATGAGCAAGAGGAGCAGGAGCATGTGGGACATGCAGGAGTT CGTCGGCAGCGTGGACACGGCCCGCGTGCTGATGCTCCTCGCGCAGCAGAGCCAGCACGG CCTGCTGGGCGGCGGCGGCTTCGCCGCCGGCGCGCAGCCGGTGGTGGTGCGCGGCGGCGC GCACGACCGCGTGTTCGAGTGCAAGACGTGCAACCGGCAGTTCCCAACGTTCCAGGCGCT CGGGGGCCACCGCGCCAGCCACAAGCGGCCGAGGCAGCAGCAGCAGCACGCGCTCGGCGG CGGCGCCGGCGCCGACGACGTGGGGCTATGCCTCGGGAGGCAGCCGACGCCGCCGCGGCC GCAGCCGGCGAAGCCGAGGGTGCACGAGTGCCCCGTCTGCGGGCTCGAGTTCCCCATCGG GCAGGCGCTCGGCGGGCACATGCGTCGGCACCGCGCGGAGGCCGAGGCGGCGGCGACAAC GACGACGACGACGACGAAGAACGGCGACGTAGGCAAGGCGGCGGCCGTGAAGGCCTGCGA CGGCGGCGGTGTCTGCCTGGACTTGAACCTGACGCCGTCGGAGAACCGCGCAAAGTGCCG GAACGTGGTGGGTCTCGGCGCCGGCGGGCAGGGCGTACACAAGGCGCTCGCCATGTTGGA TTGTTTCCTTTGAGCCGTTCAAACTGCACATATTATTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)