cluster # 5798

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5798 cluster # 5798 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5798#0 length = 1084 sequences # 3
consensusID : consensus_5798#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1084
fasta sequence
                              [CCACCCATCCAACACCACCCTTCTCCAAAGCTGCAAAATCCAAAGCGAGAAACCGCCATTGCCACCCACCTCGATTCCGCTCTCGATCTCAGCTCACTGCTGCATTGCGGCTGTCGCTGTCAGCTCGGATCGGCGCCACGGAGGCCACCGCGGACAGGAGGGCCGTGCAGCCGGCCGGCGGCGGCATGGAGCCCGGGTTCGGGAAGCGGCTGATGCACGTGCTGCGCGCGGTGTACCACATGCTGCGGCGCGGGCTGTGCCGGAAGCGCCTCATGATGGACCTCCACCTGCTCCTCGGCCGGGGCAAGCTCGCCGGCAGGGCGCTCCGCGACGTCCTCCTCGCCCA-CCAGCCGCACGGCGGCGCGGCTGCCGTGGCGGTCAT-GGGAGGCGGCGCCGGGGTGGCGCGGGGTGGTGAC-TCGTCGTCGTCGCCGCTGTCGGTGTCGTTCTTCCACCACAACCCCAGGGACGTGGAGTTCAGCTGCACCACCACGCCGTCCTACGCGCCGGGGGTCTTCCCCTTCAGGTTCCGCGGCCGCGGCGGCTCACGCCACGCCGGCGGCGGCGCCAGCAACTACGGCGGGCTCGACGCCTCCGCCGTGGCCCGCGTCTTCGAGATGCTCAACGCCAACGCCGCGGCTGCTGCTGGCGCCGGCGGGGAGACGCCGCTGTCGTCGATGCCCGGCGCCACGCCGTCCCCGTTGCTGGCGCTCAGCCTCGGCCGCAGCCCCGCCGGGACGCGGCAGCTCCGCGTCACCGACTCGCCGTTCCCCGTCGAGCCGCCGGAGGGCGCCGTCGACGGCCGCGTCGACGACAAGGCCACCGACTTCATCGAGTGGTTCCGCCGCCAGCTCCTCCAGCAGCAGGCGTCCGCCGCGCCAACGCCGGACTACCGTGGCTAGCCCGCCGACCGCCGCCGCCATCGCCGCCGCGGCATGGGCGAGCGAGCGCGAATACTAAAGCACGAGAAGCTTATATATATATATAAGGGACTATGTGGCGTCAAAATTGTTTCACTGACATGTGGGTTTCGAGTTTTTCTACCTGCATGGCTGCGTGTAATTTTTCCTCGGTTAATTAATTTCCT]

[+] EMBL AK108464             [CCACCCATCCAACACCACCCTTCTCCAAAGCTGCAAAATCCAAAGCGAGAAACCGCCATTGCCACCCACCTCGATTCCGCTCTCGATCTCAGCTCACTGCTGCATTGCGGCTGTCGCTGTCAGCTCGGATCGGCGCCACGGAGGCCACCGCGGACAGGAGGGCCGTGCAGCCGGCCGGCGGCGGCATGGAGCCCGGGTTCGGGAAGCGGCTGATGCACGTGCTGCGCGCGGTGTACCACATGCTGCGGCGCGGGCTGTGCCGGAAGCGCCTCATGATGGACCTCCACCTGCTCCTCGGCCGGGGCAAGCTCGCCGGCAGGGCGCTCCGCGACGTCCTCCTCGCCCA CCAGCCGCACGGCGGCGCGGCTGCCGTGGCGGTCAT GGGAGGCGGCGCCGGGGTGGCGCGGGGTGGTGAC TCGTCGTCGTCGCCGCTGTCGGTGTCGTTCTTCCACCACAACCCCAGGGACGTGGAGTTCAGCTGCACCACCACGCCGTCCTACGCGCCGGGGGTCTTCCCCTTCAGGTTCCGCGGCCGCGGCGGCTCACGCCACGCCGGCGGCGGCGCCAGCAACTACGGCGGGCTCGACGCCTCCGCCGTGGCCCGCGTCTTCGAGATGCTCAACGCCAACGCCGCGGCTGCTGCTGGCGCCGGCGGGGAGACGCCGCTGTCGTCGATGCCCGGCGCCACGCCGTCCCCGTTGCTGGCGCTCAGCCTCGGCCGCAGCCCCGCCGGGACGCGGCAGCTCCGCGTCACCGACTCGCCGTTCCCCGTCGAGCCGCCGGAGGGCGCCGTCGACGGCCGCGTCGACGACAAGGCCACCGACTTCATCGAGTGGTTCCGCCGCCAGCTCCTCCAGCAGCAGGCGTCCGCCGCGCCAACGCCGGACTACCGTGGCTAGCCCGCCGACCGCCGCCGCCATCGCCGCCGCGGCATGGGCGAGCGAGCGCGAATACTAAAGCACGAGAAGCTTATATATATATATAAGGGACTATGTGGCGTCAAAATTGTTTCACTGACATGTGGGTTTCGAGTTTTTCTACCTGCATGGCTGCGTGTAATTTTTCCTCGGTTAATTAATTTCCT]
[+] EMBL AU070720             [             ACCACCCTTCTCCAAAGCTGCAAAATCCAAAGCGAGAAACCGCCATTGCCACCCACCTCGATTCCGCTCTCGATCTCAGCTCACNGCTGCATTGCGGCTGTCGCTGTCAGCTCGGATCGGCGCCACGGAGGCCACCGCGGACAGGAGGGCCGTGCAGCCGGCCGGCGGCGGCATGGAGCCCGGGTTCGGGAAGCGGCTGATGCACGTGCTGCGCGCGGTGTACCACATGCTGCGGCGCGGGCTGTGCCGGAAGCGCCTCATGATGGACCTCCACCTGCTCCTCGGCCGGGGCAAGCTCGCCGGCAGGGCGCTCCGCGACGTCCTCCTCGCCCA CCAGCCGCACGGGGGCGCGGCTTCCGTNGCGGTCATNGGAAGGCGGCGCCGGGGTNGCGCGGGGTGGTGACTTCGTCGTCGTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU163460             [                                                                                                                                                                                                                                       TGTACCACATGCTGCGGCGCGGGCTGTGCCGGAAGCGCCTCATGATGGACCTCCACCTGCTCCTCGGCCGGGGNAAGCTCGCCGGCAGGG G TCCGCGANGTCCTCCTCGCCCANCCATNCGCACGGCGGCGCGGCTGCCGTGGCGGTCAT GGGAGGCGGCGCCGGGGTGGCGCGGGGTGGTGAC TCGTCGTCGTCGCCGCTGTCGGCGTCGTTCTTCCACCACAACCCCAGGGACGTGGAGTTCAGCTGCACCACCACGCCGTCCTACGCGCCGGGGGTCTTCCCCTTCAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]




>consensus_5798#0
CCACCCATCCAACACCACCCTTCTCCAAAGCTGCAAAATCCAAAGCGAGAAACCGCCATT
GCCACCCACCTCGATTCCGCTCTCGATCTCAGCTCACTGCTGCATTGCGGCTGTCGCTGT
CAGCTCGGATCGGCGCCACGGAGGCCACCGCGGACAGGAGGGCCGTGCAGCCGGCCGGCG
GCGGCATGGAGCCCGGGTTCGGGAAGCGGCTGATGCACGTGCTGCGCGCGGTGTACCACA
TGCTGCGGCGCGGGCTGTGCCGGAAGCGCCTCATGATGGACCTCCACCTGCTCCTCGGCC
GGGGCAAGCTCGCCGGCAGGGCGCTCCGCGACGTCCTCCTCGCCCACCAGCCGCACGGCG
GCGCGGCTGCCGTGGCGGTCATGGGAGGCGGCGCCGGGGTGGCGCGGGGTGGTGACTCGT
CGTCGTCGCCGCTGTCGGTGTCGTTCTTCCACCACAACCCCAGGGACGTGGAGTTCAGCT
GCACCACCACGCCGTCCTACGCGCCGGGGGTCTTCCCCTTCAGGTTCCGCGGCCGCGGCG
GCTCACGCCACGCCGGCGGCGGCGCCAGCAACTACGGCGGGCTCGACGCCTCCGCCGTGG
CCCGCGTCTTCGAGATGCTCAACGCCAACGCCGCGGCTGCTGCTGGCGCCGGCGGGGAGA
CGCCGCTGTCGTCGATGCCCGGCGCCACGCCGTCCCCGTTGCTGGCGCTCAGCCTCGGCC
GCAGCCCCGCCGGGACGCGGCAGCTCCGCGTCACCGACTCGCCGTTCCCCGTCGAGCCGC
CGGAGGGCGCCGTCGACGGCCGCGTCGACGACAAGGCCACCGACTTCATCGAGTGGTTCC
GCCGCCAGCTCCTCCAGCAGCAGGCGTCCGCCGCGCCAACGCCGGACTACCGTGGCTAGC
CCGCCGACCGCCGCCGCCATCGCCGCCGCGGCATGGGCGAGCGAGCGCGAATACTAAAGC
ACGAGAAGCTTATATATATATATAAGGGACTATGTGGCGTCAAAATTGTTTCACTGACAT
GTGGGTTTCGAGTTTTTCTACCTGCATGGCTGCGTGTAATTTTTCCTCGGTTAATTAATT
TCCT
clustalw multiple alignements is not computed in this case