These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5803#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2016 fasta sequence [GGTTAACTGTGCTGTCTCAGTTGATCTCCCGCATCTGTCATCAAAATATTGAAGTTGTCAAACTTGTCAAATGCATCGTCACATCTATTTTACGGGAGTACCCTCAGCAGGCTCTATGGATGATGGCTGCAGTGTCAAAGTCAACAGTTGCTGCAAGACGAGATGCTGCTGCTGAAATATTACAATCAGCAAAGAAGGGCAGTCGGCGTGGTAGTGACAGCAATGCATTATTCATGCAGTTTCCTTCTTTGATAGATCATCTGATCAAGCTGTGCTTTCATCCGGGGCAGCCAAAGGCAAGGGCAATAAATATCTCAACAGAGTTCAGTTCCTTGAAAAGAATGATGCCGTTAGGAATCATCTTACCCATCCAGCAGGCTCTAACTGTGACTCTACCATCATATGATACAAATATGACAGATCAATCAACTTTTCGTCCCTTTTCAGTTTCCGAGCACCCTACTATAGCCGGAATAGCTGATGATGCAGAGATCCTTAACTCTCTTCAGAAACCAAAGAAGGTTGTTTTCATTGGAAGTGATGGAATTTCTCGACCATTTCTGTGCAAACCAAAGGATGATCTTAGGAAAGATTCGCGCATGATGGAGTTCAATGCAATGATCAACCGCCTTCTCTCCAAAGTCCCTGAGAGCCGCAGGAGAAAGCTTTATATTAGAACCTTTGCAGTGGTTCCGCTTACAGAAGATTGTGGAATGGTAGAGTGGGTGCCCAATACTCGTGGTCTTCGGCAAATTCTTCAGGATATCTACATAACTTGTGGCAAATTCGATAGGATGAAAACAAACCCACAAATCAAGAAGATATATGATCAATTGCAGGGTAAAATGCCTGAGGAGATGCTGAAGGCTAAAATCCTTCCAATGTTCCCCCCAGTTTTCCACAAATGGTTCTTGACTACATTTTCTGAGCCAGCTGCATGGATCCGTGCCAGGGCAGCTTATGCGCATACAACCGCAGTTTGGTCAATGGTTGGGCATATTGTTGGGCTTGGTGACAGACATGGTGAAAACATCCTTCTCGATTCAACTACTGGGGACTGTATTCATGTGGATTTCAGCTGCTTGTTTGACAAGGGCTTGCTGCTCGAGAAGCCTGAGGTGGTGCCATTCAGGTTTACACAAAACATGGTTGATGGCTTGGGCATCACTGGTTATGAGGGCGTGTTTGTGAAGGTCTGTGAAATTACTCTATCGGTTCTGAGAACTCACAAGGAGGCACTCATGACTGTTCTTGAGACCTTTATCCATGATCCGCTAGTAGAGTGGACCAAATCTCATAAATCCAGTGGAGTGGAAGTCCGAAACCCACATGCACAGAGGGCCATCAGTAACATCACAGAAAGGCTCCAGGGAGTTGTGGTAGGCGTTAACGCCGCTCCTTCTCTGCCACTTTCTGTGGAAGGCCAAGCACGCCGCCTGATTGCTGAAGCAGTCTCCCACAGCAACCTCGGCAAGATGTACGTCTGGTGGATGGCTTGGTTCTAAGTTCTAACAGGCACAGGAGATCCCAGTAGCTAAGCAAAGATGGAGAAGTGAGAGGCTGGGGGAGGGGGTGTGCGGCAAAGTTTGACCCACAGGTGTGTCTGAATCGAAAACGGCTTTGAGGGCAGCAGAGACCGTGTCAGGTTCCCCTGCTCATCTATACATTGGCATGCAAGTCTGCAGCCCTTGGCCCACGTGTCCCTCTCTCCTCTCTCTCATCACTTCACTTGGGTGTATGTACATCTGTGATTCTGTGCTTCTGACTCCTTGATCTTGGTCCTCCACCTCAGCACATGGACCTCAAGTTTAGGCTGCATTTGAGAGTGAAGCTCTTGTCTTTGTCACAGCTTCTGGTTGCAGTTTCTTTCAAAATCTCCACGATTACTTCAGATAATTTAGAATTTTTCTTAGATTTAAGTATTTGCAGTTATACAATCTAGAAAATGACCAAAACATCAGAGGTTAGAAAACCTAACCTTTTCATATTATTGTCATCTGATTATATTTACTGGCT] [+] EMBL CB630421 [GGTTAACTGTGCTGTCTCAGTTGATCTCCCGCATCTGTCATCAAAATATTGAAGTTGTCAAACTTGTCAAATGCATCGTCACATCTATTTTACGGGAGTACCCTCAGCAGGCTCTATGGATGATGGCTGCAGTGTCAAAGTCAACAGTTGCTGCAAGACGAGATGCTGCTGCTGAAATATTACAATCAGCAAAGAAGGGCAGTCGGCGTGGTAGTGACAGCAATGCATTATTCATGCAGTTTCCTTCTTTGATAGATCATCTGATCAAGCTGTGCTTTCATCCGGGGCAGCCAAAGGCAAGGGCAATAAATATCTCAACAGAGTTCAGTTCCTTGAAAAGAATGATGCCGTTAGGAATCATCTTACCCATCCAGCAGGCTCTAACTGTGACTCTACCATCATATGATACAAATATGACAGATCAATCAACTTTTCGTCCCTTTTCAGTTTCCGAGCACCCTACTATAGCCGGAATAG ] [+] EMBL AK109634 [ CGTCACATCTATTTTACGGGAGTACCCTCAGCAGGCTCTATGGATGATGGCTGCAGTGTCAAAGTCAACAGTTGCTGCAAGACGAGATGCTGCTGCTGAAATATTACAATCAGCAAAGAAGGGCAGTCGGCGTGGTAGTGACAGCAATGCATTATTCATGCAGTTTCCTTCTTTGATAGATCATCTGATCAAGCTGTGCTTTCATCCGGGGCAGCCAAAGGCAAGGGCAATAAATATCTCAACAGAGTTCAGTTCCTTGAAAAGAATGATGCCGTTAGGAATCATCTTACCCATCCAGCAGGCTCTAACTGTGACTCTACCATCATATGATACAAATATGACAGATCAATCAACTTTTCGTCCCTTTTCAGTTTCCGAGCACCCTACTATAGCCGGAATAGCTGATGATGCAGAGATCCTTAACTCTCTTCAGAAACCAAAGAAGGTTGTTTTCATTGGAAGTGATGGAATTTCTCGACCATTTCTGTGCAAACCAAAGGATGATCTTAGGAAAGATTCGCGCATGATGGAGTTCAATGCAATGATCAACCGCCTTCTCTCCAAAGTCCCTGAGAGCCGCAGGAGAAAGCTTTATATTAGAACCTTTGCAGTGGTTCCGCTTACAGAAGATTGTGGAATGGTAGAGTGGGTGCCCAATACTCGTGGTCTTCGGCAAATTCTTCAGGATATCTACATAACTTGTGGCAAATTCGATAGGATGAAAACAAACCCACAAATCAAGAAGATATATGATCAATTGCAGGGTAAAATGCCTGAGGAGATGCTGAAGGCTAAAATCCTTCCAATGTTCCCCCCAGTTTTCCACAAATGGTTCTTGACTACATTTTCTGAGCCAGCTGCATGGATCCGTGCCAGGGCAGCTTATGCGCATACAACCGCAGTTTGGTCAATGGTTGGGCATATTGTTGGGCTTGGTGACAGACATGGTGAAAACATCCTTCTCGATTCAACTACTGGGGACTGTATTCATGTGGATTTCAGCTGCTTGTTTGACAAGGGCTTGCTGCTCGAGAAGCCTGAGGTGGTGCCATTCAGGTTTACACAAAACATGGTTGATGGCTTGGGCATCACTGGTTATGAGGGCGTGTTTGTGAAGGTCTGTGAAATTACTCTATCGGTTCTGAGAACTCACAAGGAGGCACTCATGACTGTTCTTGAGACCTTTATCCATGATCCGCTAGTAGAGTGGACCAAATCTCATAAATCCAGTGGAGTGGAAGTCCGAAACCCACATGCACAGAGGGCCATCAGTAACATCACAGAAAGGCTCCAGGGAGTTGTGGTAGGCGTTAACGCCGCTCCTTCTCTGCCACTTTCTGTGGAAGGCCAAGCACGCCGCCTGATTGCTGAAGCAGTCTCCCACAGCAACCTCGGCAAGATGTACGTCTGGTGGATGGCTTGGTTCTAAGTTCTAACAGGCACAGGAGATCCCAGTAGCTAAGCAAAGATGGAGAAGTGAGAGGCTGGGGGAGGGGGTGTGCGGCAAAGTTTGACCCACAGGTGTGTCTGAATCGAAAACGGCTTTGAGGGCAGCAGAGACCGTGTCAGGTTCCCCTGCTCATCTATACATTGGCATGCAAGTCTGCAGCCCTTGGCCCACGTGTCCCTCTCTCCTCTCTCTCATCACTTCACTTGGGTGTATGTACATCTGTGATTCTGTGCTTCTGACTCCTTGATCTTGGTCCTCCACCTCAGCACATGGACCTCAAGTTTAGGCTGCATTTGAGAGTGAAGCTCTTGTCTTTGTCACAGCTTCTGGTTGCAGTTTCTTTCAAAATCTCCACGATTACTTCAGATAATTTAGAATTTTTCTTAGATTTAAGTATTTGCAGTTATACAATCTAGAAAATGACCAAAACATCAGAGGTTAGAAAACCTAACCTTTTCATATTATTGTCATCTGATTATATTTACTG ] [-] EMBL CB630422 [ GGAGTGGAAGTCCGAAACCCACATGCACAGAGGGCCATCAGTAACATCACAGAAAGGCTCCAGGGAGTTGTGGTAGGCGTTAACGCCGCTCCTTCTCTGCCACTTTCTGTGGAAGGCCAAGCACGCCGCCTGATTGCTGAAGCAGTCTCCCACAGCAACCTCGGCAAGATGTACGTCTGGTGGATGGCTTGGTTCTAAGTTCTAACAGGCACAGGAGATCCCAGTAGCTAAGCAAAGATGGAGAAGTGAGAGGCTGGGGGAGGGGGTGTGCGGCAAAGTTTGACCCACAGGTGTGTCTGAATCGAAAACGGCTTTGAGGGCAGCAGAGACCGTGTCAGGTTCCCCTGCTCATCTATACATTGGCATGCAAGTCTGCAGCCCTTGGCCCACGTGTCCCTCTCTCCTCTCTCTCATCACTTCACTTGGGTGTATGTACATCTGTGATTCTGTGCTTCTGACTCCTTCATCTTGGTCCTCCACCTCAGCACATGGACCTCAAGTTTAGGCTGCATTTGAGCGTGAAGCTCTTGTCTTTGTCACAGCTTCTGGTTGCAGTTTCTTTCAAAATCTCCACGATTACTTCAGATAATTTAGAATTTTTCTTAGATTTAAGTATTTGCAGTTATACAATCTAGAAAATGACCAAAACATCAGAGGTTAGAAAACCTAACCTTTTCATATTATTGTCATGTGATTATATTTACTGGCT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||