cluster # 5824

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Oryza sativa
cluster # 5824 cluster # 5824 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5824#0 length = 2469 sequences # 3
consensusID : consensus_5824#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2469
fasta sequence
                              [TCAACTACTGTTTGCTTCGCCGCCGTCGCTGGCGGCAAACCGCCATGCCTCGTCGTCGAGGAACCCCTCTCCCTACTATCCTCCTCCTCCTCGCGTTCGTCGGCGGCGCATGCGGAACGGAGATCCTCTCCAAGTCCCGCCTCGAGAGCTGCTCCCACGACTCGGATGCCGGCGGCCGCCTCAAGTGCGACCGGAAGCTCGTCGTCGACCTGGCCGTCCCCAGCGGCGCCAGCGGCGGCGAGGCGTCGCTGGTGGCGCGGGTGGCCGGGGTGGAGGAAGAGAACGACACGCCATCGGCGACGAAGAGCATCCGGGATCCCCCCGTCATCACCGTCAGCAAGTCCGCCACCTACGCGCTCTACGCCCTCACCTACCTCGACAGGGATGTTGCTTACAGGCCTGACGAGAAGTATGTCAAAACACACAAATGTGAACCATATGCCGGTGCTAAAGTTGTTGGAGAGTGTGAAAGGTTATGGGATGAGAAAGGCAATGTAATCAAGCAAACAGAGCCTATTTGCTGTCCATGTGGGCCTCACCGTGTACAATCGAAATGTGGAGACATATGGTCTAAACTGACCAAAGGAAAAGCTAATACGGCTCACTGTGTGCGATTTCCAGGCGACTGGTTCCATGTATTCGGAATTGGAGCATGGTCACTTCGGTTCAGTATCAGAGTACAAGTGAAGAAAGGATCTTCTGTATGGGATGTTGTTGTTGGTCCAGAGAATAAAACTGTTGTTTCTGGAGATAACTTTCTGAGAGTAAAAGTTGTTGGTGATTATACTGGTTATACAAGTATCCCATCATTTGAGGACAACTATCTTGTGACTCCACGGAAGGGTACTGGTAGTAGTCAGCCACAAGACCTTGGTAATGAACATTCCAAATGGATGATATTGGACAGAGTTCGTTTTACACTAGACGGGCTTGAATGTGACAAGATTGGTGTTGGTTATGAGGCTTATCGAAACCAACCTAATTTCTGTTCAGCACCATATGGGAGCTGCCTGGGAAACCAGCTTTGGAACTTCTGGGAGTATGACAAAAGACGGATCGACAACAGCCAACTGCCCCTATATATTGTGGAAGGAAGATTTCAGAGGATTAATCAACATCCAAATGCAGGTGCTCATACATTTTCTGTGGGTGTCACAGAAGATCTTAATACCAATTTACTGATAGAGTTGATGGCTGATGATATAGAATACGTCTATCAGAGGAGTCCAGCAAAGATAATTGACATTCGCGTTCCAACATTTGAAGCCTTAAGCCAAGTTGGTATAGCAAATGTCACTACTAAAAATATTGGTAAACTGGAGTCTTCATATAGCTTGACGTTTAAATGCTCAAGTGGTATCAGTCCTGTGGAGGAGCAGCTCTATACCATGAAACCTGATGAAGTGATTGCCCGATCATTTGAGTTGCGTTCAACAACAGATCAAGCAGCAATGCATCAATGTGAAGCTATTCTGAAGGCATCAGACTTTAGTGAACTTGACAGAGAAGGATACCGTTTCTCTACCGCAGCTACGGTTTATAACAATGGAGCACAGATCGGTCCAACGAATGACCACAAGAAAGGCGGCTTCTGGGATTCCATCAAAGCTTTGTGGCGTAACCTGATCGATTT-CCTTACTGGCAGATTGTGCTGGACCAAATGCCCGAGATTGTTCGACTTCGGCTGCCATATTCAGTACGTATGCATCGGCTGGATCCTACTGCTTCTCCTGATACCCGCAGCTGTGGTTTTCCTGTGGCTTCTGCATCAGGAAGGCTTGTTCGACCCGCTGTACGACTGGTGGGGGCTGGAGCCGGACGACGACTACCGCGCGCGCCGACGGCACCAGAAAGGGCGGCACCACCGGCACCATCACGACCACCGGCACCGTCACGGCCACAGCCACGGCGACCACCACCACCACTACCACGGCGGGCACCACCAGAGGCGCAGGCACCACCACCCACCAGCGTGGGATGTGGAAGGCCACCACCACGACAGGCAGCAGCACAGCCACGAAGCGGGGCGCAACCACCACCGTGGCTACGGCGAGGTGGTGGCCGCGGGCGCGGCGCCGCTGCGTTTGGACAGGGCGAGCCGGCCGGGCCAGACGGAGGTCGACGCCGTGGTGGAGTACAGGGAGCGGAGGAGCCGCCACGAGAGGCACGGCGGGCACGGGCACCGCGACGGCCACTACTCCCCGTCTGTGTAAGGGATGGCTCTGACAGTCTGACGCATCTAGTGTACGTGGGATTGACATTTGAGTATTCACCAGCGATCTCGTGGTGGACTTTTCAGTCAGTTCTTGACATTGACGTTTGCCTTGTACTAAAGCCAACGTGGACTTTTAATACCCTCCGTTTTTTAATAGATGACGCAGTTGACTTTTTTCATATGTTTGACCATTCGTTTTATTTAAAAATTTTATGCAGATGTATAAGATATAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK072871             [TCAACTACTGTTTGCTTCGCCGCCGTCGCTGGCGGCAAACCGCCATGCCTCGTCGTCGAGGAACCCCTCTCCCTACTATCCTCCTCCTCCTCGCGTTCGTCGGCGGCGCATGCGGAACGGAGATCCTCTCCAAGTCCCGCCTCGAGAGCTGCTCCCACGACTCGGATGCCGGCGGCCGCCTCAAGTGCGACCGGAAGCTCGTCGTCGACCTGGCCGTCCCCAGCGGCGCCAGCGGCGGCGAGGCGTCGCTGGTGGCGCGGGTGGCCGGGGTGGAGGAAGAGAACGACACGCCATCGGCGACGAAGAGCATCCGGGATCCCCCCGTCATCACCGTCAGCAAGTCCGCCACCTACGCGCTCTACGCCCTCACCTACCTCGACAGGGATGTTGCTTACAGGCCTGACGAGAAGTATGTCAAAACACACAAATGTGAACCATATGCCGGTGCTAAAGTTGTTGGAGAGTGTGAAAGGTTATGGGATGAGAAAGGCAATGTAATCAAGCAAACAGAGCCTATTTGCTGTCCATGTGGGCCTCACCGTGTACAATCGAAATGTGGAGACATATGGTCTAAACTGACCAAAGGAAAAGCTAATACGGCTCACTGTGTGCGATTTCCAGGCGACTGGTTCCATGTATTCGGAATTGGAGCATGGTCACTTCGGTTCAGTATCAGAGTACAAGTGAAGAAAGGATCTTCTGTATGGGATGTTGTTGTTGGTCCAGAGAATAAAACTGTTGTTTCTGGAGATAACTTTCTGAGAGTAAAAGTTGTTGGTGATTATACTGGTTATACAAGTATCCCATCATTTGAGGACAACTATCTTGTGACTCCACGGAAGGGTACTGGTAGTAGTCAGCCACAAGACCTTGGTAATGAACATTCCAAATGGATGATATTGGACAGAGTTCGTTTTACACTAGACGGGCTTGAATGTGACAAGATTGGTGTTGGTTATGAGGCTTATCGAAACCAACCTAATTTCTGTTCAGCACCATATGGGAGCTGCCTGGGAAACCAGCTTTGGAACTTCTGGGAGTATGACAAAAGACGGATCGACAACAGCCAACTGCCCCTATATATTGTGGAAGGAAGATTTCAGAGGATTAATCAACATCCAAATGCAGGTGCTCATACATTTTCTGTGGGTGTCACAGAAGATCTTAATACCAATTTACTGATAGAGTTGATGGCTGATGATATAGAATACGTCTATCAGAGGAGTCCAGCAAAGATAATTGACATTCGCGTTCCAACATTTGAAGCCTTAAGCCAAGTTGGTATAGCAAATGTCACTACTAAAAATATTGGTAAACTGGAGTCTTCATATAGCTTGACGTTTAAATGCTCAAGTGGTATCAGTCCTGTGGAGGAGCAGCTCTATACCATGAAACCTGATGAAGTGATTGCCCGATCATTTGAGTTGCGTTCAACAACAGATCAAGCAGCAATGCATCAATGTGAAGCTATTCTGAAGGCATCAGACTTTAGTGAACTTGACAGAGAAGGATACCGTTTCTCTACCGCAGCTACGGTTTATAACAATGGAGCACAGATCGGTCCAACGAATGACCACAAGAAAGGCGGCTTCTGGGATTCCATCAAAGCTTTGTGGCGTAACCTGATCGATTT CCTTACTGGCAGATTGTGCTGGACCAAATGCCCGAGATTGTTCGACTTCGGCTGCCATATTCAGTACGTATGCATCGGCTGGATCCTACTGCTTCTCCTGATACCCGCAGCTGTGGTTTTCCTGTGGCTTCTGCATCAGGAAGGCTTGTTCGACCCGCTGTACGACTGGTGGGGGCTGGAGCCGGACGACGACTACCGCGCGCGCCGACGGCACCAGAAAGGGCGGCACCACCGGCACCATCACGACCACCGGCACCGTCACGGCCACAGCCACGGCGACCACCACCACCACTACCACGGCGGGCACCACCAGAGGCGCAGGCACCACCACCCACCAGCGTGGGATGTGGAAGGCCACCACCACGACAGGCAGCAGCACAGCCACGAAGCGGGGCGCAACCACCACCGTGGCTACGGCGAGGTGGTGGCCGCGGGCGCGGCGCCGCTGCGTTTGGACAGGGCGAGCCGGCCGGGCCAGACGGAGGTCGACGCCGTGGTGGAGTACAGGGAGCGGAGGAGCCGCCACGAGAGGCACGGCGGGCACGGGCACCGCGACGGCCACTACTCCCCGTCTGTGTAAGGGATGGCTCTGACAGTCTGACGCATCTAGTGTACGTGGGATTGACATTTGAGTATTCACCAGCGATCTCGTGGTGGACTTTTCAGTCAGTTCTTGACATTGACGTTTGCCTTGTACTAAAGCCAACGTGGACTTTTAATACCCTCCGTTTTTTAATAGATGACGCAGTT                                                                                      ]
[+] EMBL C74536               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ATATAGCTTGACGTTTAAATGCTCAAGTGGTATCAGTCCTGTGGAGGAGCAGCTCTATACCATGAAACCTGATGAAGTGATTGCCCGATCATTTGAGTNGCGTTCAACAACAGATCAAGCAGCAATGCATCAATGTGAAGCTATTCTGAAGGCATCAGACTTTAGTGAACTTGACAGAGAAGGATACCGTTTCTCTACCGCAGCTACGGTTTATAACAATGGAGCACAGATCGGTCCAACGAATGACCACAAGAAAGGCGGCTTCTGGGATTCCATCAAAGCTTTGTGGCGTAACCTGATCGATTTCCCTTACTGGCAGgaatttt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU075713             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AAGCGGGGCGCAACCACCACCGTGGNTACGGCGAGGTGGTGGCCGCGGGCGCGGCGCCGCTGCGTTTGGACAGGGCGAGCCGGCCGGGCCAGACGGAGGTCGACGCCGTGGTGGAGTACAGGGAGCGGAGGAGCCGCCACGAGAGGCACGGCGGGCACGGGCACCGCGACGGCCACTACTCCCCGTCTGTGTAAGGGATGGCTCTGACAGTCTGACGCATCTAGTGTACGTGGGATTGACATTTGAGTATTCACCAGCGATCTCGTGGTGGACTTTTCAGTCAGTTCTTGACATTGACGTTTGCCTTGTACTAAAGCCAACGTGGACTTTTAATACCCTCCGTTTTTTAATAGATGACGCAGTTGACTTTTTTCATATGTTTGACCATTCGTTTTATTTAAAAATTTTATGCAGATGTATAAGATATAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_5824#0
TCAACTACTGTTTGCTTCGCCGCCGTCGCTGGCGGCAAACCGCCATGCCTCGTCGTCGAG
GAACCCCTCTCCCTACTATCCTCCTCCTCCTCGCGTTCGTCGGCGGCGCATGCGGAACGG
AGATCCTCTCCAAGTCCCGCCTCGAGAGCTGCTCCCACGACTCGGATGCCGGCGGCCGCC
TCAAGTGCGACCGGAAGCTCGTCGTCGACCTGGCCGTCCCCAGCGGCGCCAGCGGCGGCG
AGGCGTCGCTGGTGGCGCGGGTGGCCGGGGTGGAGGAAGAGAACGACACGCCATCGGCGA
CGAAGAGCATCCGGGATCCCCCCGTCATCACCGTCAGCAAGTCCGCCACCTACGCGCTCT
ACGCCCTCACCTACCTCGACAGGGATGTTGCTTACAGGCCTGACGAGAAGTATGTCAAAA
CACACAAATGTGAACCATATGCCGGTGCTAAAGTTGTTGGAGAGTGTGAAAGGTTATGGG
ATGAGAAAGGCAATGTAATCAAGCAAACAGAGCCTATTTGCTGTCCATGTGGGCCTCACC
GTGTACAATCGAAATGTGGAGACATATGGTCTAAACTGACCAAAGGAAAAGCTAATACGG
CTCACTGTGTGCGATTTCCAGGCGACTGGTTCCATGTATTCGGAATTGGAGCATGGTCAC
TTCGGTTCAGTATCAGAGTACAAGTGAAGAAAGGATCTTCTGTATGGGATGTTGTTGTTG
GTCCAGAGAATAAAACTGTTGTTTCTGGAGATAACTTTCTGAGAGTAAAAGTTGTTGGTG
ATTATACTGGTTATACAAGTATCCCATCATTTGAGGACAACTATCTTGTGACTCCACGGA
AGGGTACTGGTAGTAGTCAGCCACAAGACCTTGGTAATGAACATTCCAAATGGATGATAT
TGGACAGAGTTCGTTTTACACTAGACGGGCTTGAATGTGACAAGATTGGTGTTGGTTATG
AGGCTTATCGAAACCAACCTAATTTCTGTTCAGCACCATATGGGAGCTGCCTGGGAAACC
AGCTTTGGAACTTCTGGGAGTATGACAAAAGACGGATCGACAACAGCCAACTGCCCCTAT
ATATTGTGGAAGGAAGATTTCAGAGGATTAATCAACATCCAAATGCAGGTGCTCATACAT
TTTCTGTGGGTGTCACAGAAGATCTTAATACCAATTTACTGATAGAGTTGATGGCTGATG
ATATAGAATACGTCTATCAGAGGAGTCCAGCAAAGATAATTGACATTCGCGTTCCAACAT
TTGAAGCCTTAAGCCAAGTTGGTATAGCAAATGTCACTACTAAAAATATTGGTAAACTGG
AGTCTTCATATAGCTTGACGTTTAAATGCTCAAGTGGTATCAGTCCTGTGGAGGAGCAGC
TCTATACCATGAAACCTGATGAAGTGATTGCCCGATCATTTGAGTTGCGTTCAACAACAG
ATCAAGCAGCAATGCATCAATGTGAAGCTATTCTGAAGGCATCAGACTTTAGTGAACTTG
ACAGAGAAGGATACCGTTTCTCTACCGCAGCTACGGTTTATAACAATGGAGCACAGATCG
GTCCAACGAATGACCACAAGAAAGGCGGCTTCTGGGATTCCATCAAAGCTTTGTGGCGTA
ACCTGATCGATTTCCTTACTGGCAGATTGTGCTGGACCAAATGCCCGAGATTGTTCGACT
TCGGCTGCCATATTCAGTACGTATGCATCGGCTGGATCCTACTGCTTCTCCTGATACCCG
CAGCTGTGGTTTTCCTGTGGCTTCTGCATCAGGAAGGCTTGTTCGACCCGCTGTACGACT
GGTGGGGGCTGGAGCCGGACGACGACTACCGCGCGCGCCGACGGCACCAGAAAGGGCGGC
ACCACCGGCACCATCACGACCACCGGCACCGTCACGGCCACAGCCACGGCGACCACCACC
ACCACTACCACGGCGGGCACCACCAGAGGCGCAGGCACCACCACCCACCAGCGTGGGATG
TGGAAGGCCACCACCACGACAGGCAGCAGCACAGCCACGAAGCGGGGCGCAACCACCACC
GTGGCTACGGCGAGGTGGTGGCCGCGGGCGCGGCGCCGCTGCGTTTGGACAGGGCGAGCC
GGCCGGGCCAGACGGAGGTCGACGCCGTGGTGGAGTACAGGGAGCGGAGGAGCCGCCACG
AGAGGCACGGCGGGCACGGGCACCGCGACGGCCACTACTCCCCGTCTGTGTAAGGGATGG
CTCTGACAGTCTGACGCATCTAGTGTACGTGGGATTGACATTTGAGTATTCACCAGCGAT
CTCGTGGTGGACTTTTCAGTCAGTTCTTGACATTGACGTTTGCCTTGTACTAAAGCCAAC
GTGGACTTTTAATACCCTCCGTTTTTTAATAGATGACGCAGTTGACTTTTTTCATATGTT
TGACCATTCGTTTTATTTAAAAATTTTATGCAGATGTATAAGATATAAAAAAAAAAAAAA
AAAAAAAAA
clustalw multiple alignements is not computed in this case