cluster # 5825

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Oryza sativa
cluster # 5825 cluster # 5825 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5825#0 length = 733 sequences # 3

consensusID : consensus_5825#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 733
fasta sequence

                              [CGCCTTCTCCACTTGACGGCCGGAGATCCTCGACTCCAAGATCATCAACGACAGGGAGAACCGGGAGTTCCACGTGGGTTTTGGCTTGCGTCACCTTCTCCTCCGACCAGTCGATGCGCGACCCCATCGAGGCCATGAACGGCCAAGGAGCTCGACGCCGCAAACATCACCGTCAACGAGGCCCAGTCCCACCGCTCC-GCGCGCGCCGGAGCCGGGGGCTACGGCGGCGGCGGTGCGGCTACGGCGCCGTTCGTGGAGCCGGCGGCTACGGAGGAGGTGGCGGCGGCGGCTACGGGCGCCGTGAGGGCGGCTACGGTGGC-GCGGCGGCTACGGCGGCGGCCGTGGCGGCGGCGGCGGCTACGGTGGCAGCCGTGGCGGCGGCTACGGCGGCGACTCCGGCGGGAACTGGAGGAACTGATTGGTGGGGCCCATCGTGGCCAGTTATCCTTAGCTATCCGTGTCAGAATCATCTTATCATCGAGTCGAGTCGTTATCGTGTCCAGTGGTTCTCTCGAGTCGAGAAGCCCTCTATCCATCCATCCAGTGTTAGGTGTTCTTCGTCCGTGATGTTACCATGAATTGAGTTCGCTTTGGTTATGGTGTTTGAACTGCTTG-TTGCTATCTATCGGAATGAAATGAAATAGAAAACCAGGAGAAAAAAAAGAGTTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCATGCCGTTACGTACCGTAT]

[+] EMBL BI799270             [CGCCTTCTCCACTTGACGGCCGGAGATCCTCGACTCCAAGATCATCAACGACAGGGAGAACCGGGAGTTCCACGTGGGTTTTGGCTTGCGTCACCTTCTCCTCCGACCAGTCGATGCGCGACCCCATCGAGGCCATGAACGGCCAAGGAGCTCGACGCCGCAAACATCACCGTCAACGAGGCCCAGTCCCACCGCTCC GCGCGCGCCGGAGCCGGGGGCTACGGCGGCGGCGGTGCGGCTACGGCGCCGTTCGTGGAGCCGGCGGCTACGGAGGAGGTGGCGGCGGCGGCTACGGGCGCCGTGAGGGCGGCTACGGTGGC GCGGCGGCTACGGCGGCGGCCGTGGCGGCGGCGGCGGCTACGGTGGCAGCCGTGGCGGCGGCTACGGCGGCGACTCCGGCGGGAACTGGAGGAACTGATTGGTGGGGCCCATCGTGGCCAGTTATCCTTAGCTATCCGTGTCAGAATCATCTTATCATCGAGTCGAGTCGTTATCGTGTCCAGTGGTTCTCTCGAGTCGAGAAGCCCTCTATCCATCCATCCAGTGTTAGGTGTTCTTCGTCCGTGATGTTACCATGAATTGAGTTCGCTTTGGTTATGGTGTTTGAACTGCTTGCTTGCTATCTATCGGAATGAAATGAAATAGAAAACCAGGAGAAAAAAAAGAGTTCGAAAAA                                                          ]
[+] EMBL BI798228             [                                                                                                                                                          tgccctgcAACTTCACCGTCACCGAGGCCCAGTCCCGCCGCTCCGGCGCGCG CGGAGGCGGGGGCTACGGC GC GC GTGCGGCTAC GCG CGTTCGTGGAG CGGCGGCTACGGAGGAGGT GC GCGGCGGCTACGGGCGCCGTGAGGGCGGCTAC GTGGCGGCGGCGGCTACGGCGGCGGCCGTGGCGGCGGCGGCGGCTACGGTGGCAGCCGTGGCGGCGGCTACGGCGGCGACTCCGGCGGGAACTGGAGGAACTGATTGGTGGGGCCCATCGTGGCCAGTTATCCTTAGCTATCCGTGTCAGAATCATCTTATCATCGAGTCGAGTCGTTATCGTGTCCAGTGGTTCTCTCGAGTCGAGAAGCCCTCTATCCATCCATCCAGTGTTAGGTGTTCTTCGTCCGTGATGTTACCATGAATTGAGTTCGCTTTGGTTATGGTGTTTGAACTGCTTG TTGCTATCTATCGGAATGAAATGAAATAGAAAA  A  AAAAAAAA                                                                        ]
[+] EMBL CF331069             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTATCATCGAGTCGAGTCGTTATCGTGTCCAGTGGCTCTCTCGAGTCGAGAAGCCCTCTATCCATCCATCCAGTGTTAGGTGTTCTTCGTCCGTGATGTTACCATGAATTGAGTTCGCTTTGGTTATGGTGTTTGAACTGCTTG TTGCTATCTATCGGAATGAAATGAAATAGAAAACAAGGAGAAAAAAAAGAGTTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCATGCCGTTACGTACCGTAT]




>consensus_5825#0
CGCCTTCTCCACTTGACGGCCGGAGATCCTCGACTCCAAGATCATCAACGACAGGGAGAA
CCGGGAGTTCCACGTGGGTTTTGGCTTGCGTCACCTTCTCCTCCGACCAGTCGATGCGCG
ACCCCATCGAGGCCATGAACGGCCAAGGAGCTCGACGCCGCAAACATCACCGTCAACGAG
GCCCAGTCCCACCGCTCCGCGCGCGCCGGAGCCGGGGGCTACGGCGGCGGCGGTGCGGCT
ACGGCGCCGTTCGTGGAGCCGGCGGCTACGGAGGAGGTGGCGGCGGCGGCTACGGGCGCC
GTGAGGGCGGCTACGGTGGCGCGGCGGCTACGGCGGCGGCCGTGGCGGCGGCGGCGGCTA
CGGTGGCAGCCGTGGCGGCGGCTACGGCGGCGACTCCGGCGGGAACTGGAGGAACTGATT
GGTGGGGCCCATCGTGGCCAGTTATCCTTAGCTATCCGTGTCAGAATCATCTTATCATCG
AGTCGAGTCGTTATCGTGTCCAGTGGTTCTCTCGAGTCGAGAAGCCCTCTATCCATCCAT
CCAGTGTTAGGTGTTCTTCGTCCGTGATGTTACCATGAATTGAGTTCGCTTTGGTTATGG
TGTTTGAACTGCTTGTTGCTATCTATCGGAATGAAATGAAATAGAAAACCAGGAGAAAAA
AAAGAGTTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCATGCCG
TTACGTACCGTAT

clustalw multiple alignements is not computed in this case