cluster # 5840

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Oryza sativa
cluster # 5840 cluster # 5840 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5840#0 length = 726 sequences # 3

consensusID : consensus_5840#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 726
fasta sequence

                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATATACGCAAAACTTTGCAGTAACCAAATCGATTCACAGGCCACACATACAGGTAGTATACAGATTCGTCTACACACAAGGTTATTGCAGAGGCAAAACACGGGGTATGTATATCAAACGCTCTAGAAAAGATTCATGTGATGAAATACATGATGANCCACGTATGTNCTCANGGTAAAATTAATTAATGCAGTATAGTTTTAACTTTGTCCATCGNTCTCAACCNGTAACTNTGACGGCACACTGGCTACAGTGCCCTCGNGGTACTAGCAGTATAGCAGTAGCTGTAGTACGTAGCAGCAGCAGCAGCAGGTTCACTGTCTTGATTGGATTGGATCGGATTAGTANACGTNGTTCTTGACGAACATGCCCTCCTTGGCCTCGGCGGGCTCGCCGTCGCTGGTGTTCTTGCCGANCTGCGCCACGAATTTGCCTTGGGCCGAAAGGAAAAACGCTTNTGCGCCGCCTTCACTTCTCCGGTGCCCGCCCNCTTCTTGAGGCCNTNTTCTGCACCCCNCCTTNNAAAANAANCTTCCCGGGTTNGGCCCCGGTTCNCCGTTCAGGTTTGGTTCCCCCCCNCNAANGCCCCNAAAAAAATATCCNGGAAGGAGGGGATCCNCTTGAGACTAAGTTTTCAAATGCCGGGNGCCTCTGCCGCCGGTTCCCCNGGTAAAAAACCCCAANCNT]

[-] EMBL AU098348             [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATATACGCAAAACTTTGCAGTAACCAAATCGATTCACAGGCCACACATACAGGTAGTATACAGATTCGTCTACACACAAGGTTATTGCAGAGGCAAAACACGGGGTATGTATATCAAACGCTCTAGAAAAGATTCATGTGATGAAATACATGATGANCCACGTATGTNCTCANGGTAAAATTAATTAATGCAGTATAGTTTTAACTTTGTCCATCGNTCTCAACCNGTAACTNTGACGGCACACTGGCTACAGTGCCCTCGNGGTACTAGCAGTATAGCAGTAGCTGTAGTACGTAGCAGCAGCAGCAGCAGGTTCACTGTCTTGATTGGATTGGATCGGATT                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF280458             [                       TTTTTTTTTTTTTTTTA ATACGCAAAACTTTGCAGTAACCAAATCGATTCACAGGCCACAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BE229103             [                                                                                                      ATTCGTCTACACACAAGGTTATTGCAGAGGCAAAACACGAGGTATGTATATCAAACGCTCTAGAAAAGATTCATGTGATGAAATACATGATGAACCACGTATGTTCTCAAGGTAAAATTAATTAATGCAGTATAGTTTTAACTTTGTCCATCGATCTCAACCTGTAACTGTGACGACACACTGGCTACAGTGCCCTCGAGGTACTAGCAGTATAGCAGTAGCTGTAGTACGTAGCAGCAGCAGCAGCAGGTTCACTGTCTTGATTGGATTGGATCGGATTAGTANACGTNGTTCTTGACGAACATGCCCTCCTTGGCCTCGGCGGGCTCGCCGTCGCTGGTGTTCTTGCCGANCTGCGCCACGAATTTGCCTTGGGCCGAAAGGAAAAACGCTTNTGCGCCGCCTTCACTTCTCCGGTGCCCGCCCNCTTCTTGAGGCCNTNTTCTGCACCCCNCCTTNNAAAANAANCTTCCCGGGTTNGGCCCCGGTTCNCCGTTCAGGTTTGGTTCCCCCCCNCNAANGCCCCNAAAAAAATATCCNGGAAGGAGGGGATCCNCTTGAGACTAAGTTTTCAAATGCCGGGNGCCTCTGCCGCCGGTTCCCCNGGTAAAAAACCCCAANCNT]




>consensus_5840#0
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATATACGCAAAACTTTGCAGT
AACCAAATCGATTCACAGGCCACACATACAGGTAGTATACAGATTCGTCTACACACAAGG
TTATTGCAGAGGCAAAACACGGGGTATGTATATCAAACGCTCTAGAAAAGATTCATGTGA
TGAAATACATGATGANCCACGTATGTNCTCANGGTAAAATTAATTAATGCAGTATAGTTT
TAACTTTGTCCATCGNTCTCAACCNGTAACTNTGACGGCACACTGGCTACAGTGCCCTCG
NGGTACTAGCAGTATAGCAGTAGCTGTAGTACGTAGCAGCAGCAGCAGCAGGTTCACTGT
CTTGATTGGATTGGATCGGATTAGTANACGTNGTTCTTGACGAACATGCCCTCCTTGGCC
TCGGCGGGCTCGCCGTCGCTGGTGTTCTTGCCGANCTGCGCCACGAATTTGCCTTGGGCC
GAAAGGAAAAACGCTTNTGCGCCGCCTTCACTTCTCCGGTGCCCGCCCNCTTCTTGAGGC
CNTNTTCTGCACCCCNCCTTNNAAAANAANCTTCCCGGGTTNGGCCCCGGTTCNCCGTTC
AGGTTTGGTTCCCCCCCNCNAANGCCCCNAAAAAAATATCCNGGAAGGAGGGGATCCNCT
TGAGACTAAGTTTTCAAATGCCGGGNGCCTCTGCCGCCGGTTCCCCNGGTAAAAAACCCC
AANCNT

clustalw multiple alignements is not computed in this case