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Oryza sativa
cluster # 5841 cluster # 5841       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5841#0 length = 3254 sequences # 2  
 consensus_5841#1 length = 526 sequences # 1  
consensusID : consensus_5841#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3254
fasta sequence 
                              [TTTTGCAGTTGCAGCCTTGCACCTCCCTCCCATTAACTTGTCCTCGCTCACCAAGGTGCCCACGTCGCTGCGCGCACAAATTCGGGCCATGGAGGAGGCAGCGGCGCCGGAGCGGAAGCGGCCGCGCGACGGCGACGTGGGTCCATCGACGGCGGCATCCGGGGAGGCGCAGTACGTGTACCTGCCCATCGCCGACGCGCTGAAGGCCCCCGGGGCCCGGGTCTGCCTCTTCGCCGCCGTCTCCGAGATCGGCGCGGCCGTCCGCAGCCGCGGCACCGGTGAGCCTCCTTCTCGCCCGCACTTTCGAGTCCCCCCCCCCCCCCCCCTGAGAGCAGGGTTTAGGGTTTTGGTCGCTATAGCGGATTTGGAGCTGTTTGGGGTTGCTACTGGACTAATAATTTTCAGTGCTCAAATGTGCTCGGTCATGGTGGGGGAGATTAGGTCGAGTTTCCGCACCCGATTTGCGAGCTGTTCTGATTGTAAATGCTAGGGAAAGAGGAAGATGTGGGGTTTTAGGTGTAGGCCTATAGCCATGCCGAAGTTCTGAACACTGAACAGAACAGGGTCATTTTTGGGGGATTTTTGCTGTTAATTGGATGAAGAAGCAAACCTGGTGAGTTCTAATGGCTGTATCTGAAATCGCCAATTATAGATGAGCTTACCATGTTCCACCTTGGAGGAGTTTCTTTGGTTGGTTATTGAGCTCAATTGTGATTATATTCTTATACATTTGCTATTGCAGAAATGCCTGTATGACAGGTTTAACAATTTTTGTTTTTTGTTGATTCTTTTGTGATTATACCTGCAATTGACGTCGTGCTACTTATCCATGGCTATCATTTGTGCAGATTTCACTCTTACGTTGAGGATTGTGGATCACTCACGTGCATCTGCAATCTCTGTGACCTTCTTTGCTGATAACACTGCATTACTGCCCTGTGTTAGGTCAAGTGGAGATGTGATCAGTCTCCATAATGTTGTGATAACAATGCACCATGGCGAATTCTTTGTCACATATAACAAAAGGTTTTCTTCATTTGCGCTATTTGAAGGGAAAGTATCTACGGGATGCATACCATATCAGCATTCTATGAAATACCATGGCAGCAAACATGACAGTGAATTTTTGACTCACTTGAGAATGTGGATTGTATATAATCCTCCAGGTGAGTATGTGACTGCTAGTTGAAAAATTATTGTTGCTCATTTTTCTCTTGTCCACTCATAAGCTATACGGATGATATGTCTTGTGAAGTTGTGATACTCCAAAACTTTGCACATCTACGAATATTATAAGGAACAACATGCCTAGAAGCTCCTAACCCACATGAGAATATGTTGTTATCAATTCCTGATTTTACCAGTTGCTGTGAACATACATCGATATATGACTCATATACAATCATTAGTATACAATCGATAACATACTCTCCTTTACCCAAAAGTTAAGCATTATTACATAAACACGTGTACAATAGAACACCCATTCTTTTCTTTACAACCTTAGGACAGGATGCCTAGGTTTCGGTCAAATAAAATAAAAGCCTTCAAATTGGTTGTCAGCTCTACATTTCTTTCTAATTTTTTTAAATTTTTGGTTGTCAGCTCTTTAGCATTATCATGTTTTATTGACTGCCTGTCCTAGCAGTACCTGTTGAGTATATGATTCACCTACTTTTGGATACTCGTCCGTCTATTATAATGTGGCTTATGCTCAACAGCATCTACTGATTTACGTCTATGTATTTTGCACAAAATGCAGATTACCGAAATATTTATATCTTCTCTGCTGAATACATGCACTACAAATATCTGTTGCAACACTCTTTCTTTTTCTAACAAGCTATTTTGCTCTCTAGGTCTGAAAGATCTTGAACTGCAGTTAAGGAGTATAAAATCCGATTCTACTTTTGATCTAGTATGCAAGGTTAGCTCTATATGAAGTTACATAATATTCAACAGTTATTTGAATAGAGGAAATCTGATGTTCCTTTTTGTTAGGTTCTAGATGTTCATGAAGCTTCCAATGGCGTATGGATTTTGTATGTTTGGGATGGAACTGATACACCTGTGACCGAGTTCCCGACGTAAAAATTAGACATTGGTGTCACTGTTTAATTTTTAATTCAGAAATAACTTAAAATTAATTCTGCAAAATAGGATGGTGTTGGTGCTTATAACATTGTGTTGAAGTAAATTGTGCCTCTGCCATTTCTTTCATAACGTATGGCATAATATGATAATAACAGTTCATTTTTAACTAAATTGCGCCTATGTTGTTTGGCTTGGTTGAATGCAGCTTGGACAATGAATCAGTTTCTCCACCCCCTCTACATCTTGAAGGAGCACCTCTGCCAAGGGAGGTTTTGTGCACATTGCCTTGTGTTGGGAGTGTGCTGAGGGTTTTCTCAAACAGGTTTTTCAAGGAAATGCTACACTTGCAAAAGGGTATTTATTGGGCCAGGTTCTGTAATATGACGTGCAAGCAGCAGTTTGGCATGTGGAAAGGGATTCTGCTGCCTTCTAGCAGAGTCCGCCTTTTATCAAATGAAGATGGCAGCGTTGCTGATCGTCTGAAGCTATTCGACAGTCGCATTGCCACCCAAATTCATCGTCAGCCAATGGCAAGCCTCCCCAATGCTTCTGATATTGCTGATGTAGAATACGAGAGAGCAGGTTACACAACATTGATGGAGTCGCTCACCCATGGAGAGGTGACGCACAAATTCAAAACCTTGGTTCGAGTTGTTGCAGCATATCCACGTGGAGCTAGTCATCTTTGTTCACTATTGGCTGGCAATTGTTGTCTAAGGTTGACTCTTGAGGATCCTACGGCAAGAATTCATGCGTACATCCACAAGGACGATGGGGCCAAATTTTTTGGTGGTTTCCTGACGGCAGAAGCTGTGATCAGAAAGATGAACAAGCTTCTGGGTATCCCAGAAGACACCGAGGAAGGTGCTCCATCGAATAGGAACCCACCTTGGATATGGTGTTGCTTGAAGTCTTACCGTCTGGACAAGAACGATCCCTGGGGAAGCAGAAGGTATCGGATTTTTGGCACAGAGATCAGGGATTGAATAGGGGAGAAAGATTTGGAGCAACTTGGAAATTACTGTGTACAGTGGCATTTGCTTGTGGTACAGACACGCAAATTGACTGAGTTGTAACAGCTAGGTGACAGCCTTTCGGTTGGTGCTACTACCTACAATGTTACTGTGATGCTGTTAGCATTTGGTAATGCCAGATGATTT]

[+] EMBL AK099483             [TTTTGCAGTTGCAGCCTTGCACCTCCCTCCCATTAACTTGTCCTCGCTCACCAAGGTGCCCACGTCGCTGCGCGCACAAATTCGGGCCATGGAGGAGGCAGCGGCGCCGGAGCGGAAGCGGCCGCGCGACGGCGACGTGGGTCCATCGACGGCGGCATCCGGGGAGGCGCAGTACGTGTACCTGCCCATCGCCGACGCGCTGAAGGCCCCCGGGGCCCGGGTCTGCCTCTTCGCCGCCGTCTCCGAGATCGGCGCGGCCGTCCGCAGCCGCGGCACCGGTGAGCCTCCTTCTCGCCCGCACTTTCGAGTCCCCCCCCCCCCCCCCCTGAGAGCAGGGTTTAGGGTTTTGGTCGCTATAGCGGATTTGGAGCTGTTTGGGGTTGCTACTGGACTAATAATTTTCAGTGCTCAAATGTGCTCGGTCATGGTGGGGGAGATTAGGTCGAGTTTCCGCACCCGATTTGCGAGCTGTTCTGATTGTAAATGCTAGGGAAAGAGGAAGATGTGGGGTTTTAGGTGTAGGCCTATAGCCATGCCGAAGTTCTGAACACTGAACAGAACAGGGTCATTTTTGGGGGATTTTTGCTGTTAATTGGATGAAGAAGCAAACCTGGTGAGTTCTAATGGCTGTATCTGAAATCGCCAATTATAGATGAGCTTACCATGTTCCACCTTGGAGGAGTTTCTTTGGTTGGTTATTGAGCTCAATTGTGATTATATTCTTATACATTTGCTATTGCAGAAATGCCTGTATGACAGGTTTAACAATTTTTGTTTTTTGTTGATTCTTTTGTGATTATACCTGCAATTGACGTCGTGCTACTTATCCATGGCTATCATTTGTGCAGATTTCACTCTTACGTTGAGGATTGTGGATCACTCACGTGCATCTGCAATCTCTGTGACCTTCTTTGCTGATAACACTGCATTACTGCCCTGTGTTAGGTCAAGTGGAGATGTGATCAGTCTCCATAATGTTGTGATAACAATGCACCATGGCGAATTCTTTGTCACATATAACAAAAGGTTTTCTTCATTTGCGCTATTTGAAGGGAAAGTATCTACGGGATGCATACCATATCAGCATTCTATGAAATACCATGGCAGCAAACATGACAGTGAATTTTTGACTCACTTGAGAATGTGGATTGTATATAATCCTCCAGGTGAGTATGTGACTGCTAGTTGAAAAATTATTGTTGCTCATTTTTCTCTTGTCCACTCATAAGCTATACGGATGATATGTCTTGTGAAGTTGTGATACTCCAAAACTTTGCACATCTACGAATATTATAAGGAACAACATGCCTAGAAGCTCCTAACCCACATGAGAATATGTTGTTATCAATTCCTGATTTTACCAGTTGCTGTGAACATACATCGATATATGACTCATATACAATCATTAGTATACAATCGATAACATACTCTCCTTTACCCAAAAGTTAAGCATTATTACATAAACACGTGTACAATAGAACACCCATTCTTTTCTTTACAACCTTAGGACAGGATGCCTAGGTTTCGGTCAAATAAAATAAAAGCCTTCAAATTGGTTGTCAGCTCTACATTTCTTTCTAATTTTTTTAAATTTTTGGTTGTCAGCTCTTTAGCATTATCATGTTTTATTGACTGCCTGTCCTAGCAGTACCTGTTGAGTATATGATTCACCTACTTTTGGATACTCGTCCGTCTATTATAATGTGGCTTATGCTCAACAGCATCTACTGATTTACGTCTATGTATTTTGCACAAAATGCAGATTACCGAAATATTTATATCTTCTCTGCTGAATACATGCACTACAAATATCTGTTGCAACACTCTTTCTTTTTCTAACAAGCTATTTTGCTCTCTAGGTCTGAAAGATCTTGAACTGCAGTTAAGGAGTATAAAATCCGATTCTACTTTTGATCTAGTATGCAAGGTTAGCTCTATATGAAGTTACATAATATTCAACAGTTATTTGAATAGAGGAAATCTGATGTTCCTTTTTGTTAGGTTCTAGATGTTCATGAAGCTTCCAATGGCGTATGGATTTTGTATGTTTGGGATGGAACTGATACACCTGTGACCGAGTTCCCGACGTAAAAATTAGACATTGGTGTCACTGTTTAATTTTTAATTCAGAAATAACTTAAAATTAATTCTGCAAAATAGGATGGTGTTGGTGCTTATAACATTGTGTTGAAGTAAATTGTGCCTCTGCCATTTCTTTCATAACGTATGGCATAATATGATAATAACAGTTCATTTTTAACTAAATTGCGCCTATGTTGTTTGGCTTGGTTGAATGCAGCTTGGACAATGAATCAGTTTCTCCACCCCCTCTACATCTTGAAGGAGCACCTCTGCCAAGGGAGGTTTTGTGCACATTGCCTTGTGTTGGGAGTGTGCTGAGGGTTTTCTCAAACAGGTTTTTCAAGGAAATGCTACACTTGCAAAAGGGTATTTATTGGGCCAGGTTCTGTAATATGACGTGCAAGCAGCAGTTTGGCATGTGGAAAGGGATTCTGCTGCCTTCTAGCAGAGTCCGCCTTTTATCAAATGAAGATGGCAGCGTTGCTGATCGTCTGAAGCTATTCGACAGTCGCATTGCCACCCAAATTCATCGTCAGCCAATGGCAAGCCTCCCCAATGCTTCTGATATTGCTGATGTAGAATACGAGAGAGCAGGTTACACAACATTGATGGAGTCGCTCACCCATGGAGAGGTGACGCACAAATTCAAAACCTTGGTTCGAGTTGTTGCAGCATATCCACGTGGAGCTAGTCATCTTTGTTCACTATTGGCTGGCAATTGTTGTCTAAGGTTGACTCTTGAGGATCCTACGGCAAGAATTCATGCGTACATCCACAAGGACGATGGGGCCAAATTTTTTGGTGGTTTCCTGACGGCAGAAGCTGTGATCAGAAAGATGAACAAGCTTCTGGGTATCCCAGAAGACACCGAGGAAGGTGCTCCATCGAATAGGAACCCACCTTGGATATGGTGTTGCTTGAAGTCTTACCGTCTGGACAAGAACGATCCCTGGGGAAGCAGAAGGTATCGGATTTTTGGCACAGAGATCAGGGATTGAATAGGGGAGAAAGATTTGGAGCAACTTGGAAATTACTGTGTACAGTGGCATTTGCTTGTGGTACAGACACGCAAATTGACTGAGTTGTAACAGCTAGGTGACAGCCTTTCGGTTGGTGCTACTACCTACAATGTTACTGTGATGCTGTTAGCATTTGGTAATGCCAGATGATTT]
[-] EMBL AU225587             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TTGGTTCACTA TGGCTGGCAATTGTTGTCTAAGGTTGACTCTTGAGGATCCTACGGCAAGAATTCATGCGTACATCCACAAGGACGATGGGGCC AATTTTTTGGTGGTTTCCTGACGGCAGAAGCTGTGATCAGAAAGATGAACAAGCTTCTGGGTATCCCAGAAGACACCGAGGAAGGTGCTCCATCGAATAGGAACCCACCTTGGATATGGTGTTGCTTGAAGTCTTACCGTCTGGACAAGAACGATCCCTGGGGAAGCAGAAGGTATCGGATTTTTGGCACAGAGATCAGGGATTGAATAGGGGAGAAAGATTTGGAGCAACTTGGAAATTACTGTGTACAGTGGCATTTGCTTGTGGTACAGACACGCAAATTGACTGAGTTGTAACAGCTAGGTGACAGCCTTTCGGTTGGTGCTACTACCTACAATGTTACTGTGATGCTGTTAGCATTTGGTAATGCCAGAgcggc ]




>consensus_5841#0
TTTTGCAGTTGCAGCCTTGCACCTCCCTCCCATTAACTTGTCCTCGCTCACCAAGGTGCC
CACGTCGCTGCGCGCACAAATTCGGGCCATGGAGGAGGCAGCGGCGCCGGAGCGGAAGCG
GCCGCGCGACGGCGACGTGGGTCCATCGACGGCGGCATCCGGGGAGGCGCAGTACGTGTA
CCTGCCCATCGCCGACGCGCTGAAGGCCCCCGGGGCCCGGGTCTGCCTCTTCGCCGCCGT
CTCCGAGATCGGCGCGGCCGTCCGCAGCCGCGGCACCGGTGAGCCTCCTTCTCGCCCGCA
CTTTCGAGTCCCCCCCCCCCCCCCCCTGAGAGCAGGGTTTAGGGTTTTGGTCGCTATAGC
GGATTTGGAGCTGTTTGGGGTTGCTACTGGACTAATAATTTTCAGTGCTCAAATGTGCTC
GGTCATGGTGGGGGAGATTAGGTCGAGTTTCCGCACCCGATTTGCGAGCTGTTCTGATTG
TAAATGCTAGGGAAAGAGGAAGATGTGGGGTTTTAGGTGTAGGCCTATAGCCATGCCGAA
GTTCTGAACACTGAACAGAACAGGGTCATTTTTGGGGGATTTTTGCTGTTAATTGGATGA
AGAAGCAAACCTGGTGAGTTCTAATGGCTGTATCTGAAATCGCCAATTATAGATGAGCTT
ACCATGTTCCACCTTGGAGGAGTTTCTTTGGTTGGTTATTGAGCTCAATTGTGATTATAT
TCTTATACATTTGCTATTGCAGAAATGCCTGTATGACAGGTTTAACAATTTTTGTTTTTT
GTTGATTCTTTTGTGATTATACCTGCAATTGACGTCGTGCTACTTATCCATGGCTATCAT
TTGTGCAGATTTCACTCTTACGTTGAGGATTGTGGATCACTCACGTGCATCTGCAATCTC
TGTGACCTTCTTTGCTGATAACACTGCATTACTGCCCTGTGTTAGGTCAAGTGGAGATGT
GATCAGTCTCCATAATGTTGTGATAACAATGCACCATGGCGAATTCTTTGTCACATATAA
CAAAAGGTTTTCTTCATTTGCGCTATTTGAAGGGAAAGTATCTACGGGATGCATACCATA
TCAGCATTCTATGAAATACCATGGCAGCAAACATGACAGTGAATTTTTGACTCACTTGAG
AATGTGGATTGTATATAATCCTCCAGGTGAGTATGTGACTGCTAGTTGAAAAATTATTGT
TGCTCATTTTTCTCTTGTCCACTCATAAGCTATACGGATGATATGTCTTGTGAAGTTGTG
ATACTCCAAAACTTTGCACATCTACGAATATTATAAGGAACAACATGCCTAGAAGCTCCT
AACCCACATGAGAATATGTTGTTATCAATTCCTGATTTTACCAGTTGCTGTGAACATACA
TCGATATATGACTCATATACAATCATTAGTATACAATCGATAACATACTCTCCTTTACCC
AAAAGTTAAGCATTATTACATAAACACGTGTACAATAGAACACCCATTCTTTTCTTTACA
ACCTTAGGACAGGATGCCTAGGTTTCGGTCAAATAAAATAAAAGCCTTCAAATTGGTTGT
CAGCTCTACATTTCTTTCTAATTTTTTTAAATTTTTGGTTGTCAGCTCTTTAGCATTATC
ATGTTTTATTGACTGCCTGTCCTAGCAGTACCTGTTGAGTATATGATTCACCTACTTTTG
GATACTCGTCCGTCTATTATAATGTGGCTTATGCTCAACAGCATCTACTGATTTACGTCT
ATGTATTTTGCACAAAATGCAGATTACCGAAATATTTATATCTTCTCTGCTGAATACATG
CACTACAAATATCTGTTGCAACACTCTTTCTTTTTCTAACAAGCTATTTTGCTCTCTAGG
TCTGAAAGATCTTGAACTGCAGTTAAGGAGTATAAAATCCGATTCTACTTTTGATCTAGT
ATGCAAGGTTAGCTCTATATGAAGTTACATAATATTCAACAGTTATTTGAATAGAGGAAA
TCTGATGTTCCTTTTTGTTAGGTTCTAGATGTTCATGAAGCTTCCAATGGCGTATGGATT
TTGTATGTTTGGGATGGAACTGATACACCTGTGACCGAGTTCCCGACGTAAAAATTAGAC
ATTGGTGTCACTGTTTAATTTTTAATTCAGAAATAACTTAAAATTAATTCTGCAAAATAG
GATGGTGTTGGTGCTTATAACATTGTGTTGAAGTAAATTGTGCCTCTGCCATTTCTTTCA
TAACGTATGGCATAATATGATAATAACAGTTCATTTTTAACTAAATTGCGCCTATGTTGT
TTGGCTTGGTTGAATGCAGCTTGGACAATGAATCAGTTTCTCCACCCCCTCTACATCTTG
AAGGAGCACCTCTGCCAAGGGAGGTTTTGTGCACATTGCCTTGTGTTGGGAGTGTGCTGA
GGGTTTTCTCAAACAGGTTTTTCAAGGAAATGCTACACTTGCAAAAGGGTATTTATTGGG
CCAGGTTCTGTAATATGACGTGCAAGCAGCAGTTTGGCATGTGGAAAGGGATTCTGCTGC
CTTCTAGCAGAGTCCGCCTTTTATCAAATGAAGATGGCAGCGTTGCTGATCGTCTGAAGC
TATTCGACAGTCGCATTGCCACCCAAATTCATCGTCAGCCAATGGCAAGCCTCCCCAATG
CTTCTGATATTGCTGATGTAGAATACGAGAGAGCAGGTTACACAACATTGATGGAGTCGC
TCACCCATGGAGAGGTGACGCACAAATTCAAAACCTTGGTTCGAGTTGTTGCAGCATATC
CACGTGGAGCTAGTCATCTTTGTTCACTATTGGCTGGCAATTGTTGTCTAAGGTTGACTC
TTGAGGATCCTACGGCAAGAATTCATGCGTACATCCACAAGGACGATGGGGCCAAATTTT
TTGGTGGTTTCCTGACGGCAGAAGCTGTGATCAGAAAGATGAACAAGCTTCTGGGTATCC
CAGAAGACACCGAGGAAGGTGCTCCATCGAATAGGAACCCACCTTGGATATGGTGTTGCT
TGAAGTCTTACCGTCTGGACAAGAACGATCCCTGGGGAAGCAGAAGGTATCGGATTTTTG
GCACAGAGATCAGGGATTGAATAGGGGAGAAAGATTTGGAGCAACTTGGAAATTACTGTG
TACAGTGGCATTTGCTTGTGGTACAGACACGCAAATTGACTGAGTTGTAACAGCTAGGTG
ACAGCCTTTCGGTTGGTGCTACTACCTACAATGTTACTGTGATGCTGTTAGCATTTGGTA
ATGCCAGATGATTT

consensusID : consensus_5841#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 526
fasta sequence 
                              [GCATCTGCAATCTCTGTGACCTTCTTTGCTGATAACACTGCATTACTGCCCTGTGTTAGGTCAAGTGGAGATGTGATCAGTCTCCATAATGTTGTGATAACAATGCACCATGGCGAATTCTTTGTCACATATAACAAAAGGTTTTCTTCATTTGCGCTATTTGAAGGGAAAGTATCTACGGGATGCATACCATATCAGCATTCTATGAAATACCATGGCAGCAAACATGACAGTGAATTTTTGACTCACTTGAGAATGTGGATTGTATATAATCCTCCAGGTCTGAAAGATCTTGAACTGCAGTTAAGGAGTATAAAATCCGATTCTACTTTTGATCTAGTATGCAAGGTTCTAGATGTTCATGAAGCTTCCAATGGCGTATGGATTTTGTATGTTTGGGATGGAACTGATACACCTGTGACCGAGTTCCCGACCTTGGACAATGAATCAGTTTCTCCACCCCCTCTACATCTTGAAGGAGCACCTCTGCCAAGGGAGGTTTTGTGCACATTGCCTTGTGTTGGGA]

[+] EMBL CA998438             [GCATCTGCAATCTCTGTGACCTTCTTTGCTGATAACACTGCATTACTGCCCTGTGTTAGGTCAAGTGGAGATGTGATCAGTCTCCATAATGTTGTGATAACAATGCACCATGGCGAATTCTTTGTCACATATAACAAAAGGTTTTCTTCATTTGCGCTATTTGAAGGGAAAGTATCTACGGGATGCATACCATATCAGCATTCTATGAAATACCATGGCAGCAAACATGACAGTGAATTTTTGACTCACTTGAGAATGTGGATTGTATATAATCCTCCAGGTCTGAAAGATCTTGAACTGCAGTTAAGGAGTATAAAATCCGATTCTACTTTTGATCTAGTATGCAAGGTTCTAGATGTTCATGAAGCTTCCAATGGCGTATGGATTTTGTATGTTTGGGATGGAACTGATACACCTGTGACCGAGTTCCCGACCTTGGACAATGAATCAGTTTCTCCACCCCCTCTACATCTTGAAGGAGCACCTCTGCCAAGGGAGGTTTTGTGCACATTGCCTTGTGTTGGGA]




>consensus_5841#1
GCATCTGCAATCTCTGTGACCTTCTTTGCTGATAACACTGCATTACTGCCCTGTGTTAGG
TCAAGTGGAGATGTGATCAGTCTCCATAATGTTGTGATAACAATGCACCATGGCGAATTC
TTTGTCACATATAACAAAAGGTTTTCTTCATTTGCGCTATTTGAAGGGAAAGTATCTACG
GGATGCATACCATATCAGCATTCTATGAAATACCATGGCAGCAAACATGACAGTGAATTT
TTGACTCACTTGAGAATGTGGATTGTATATAATCCTCCAGGTCTGAAAGATCTTGAACTG
CAGTTAAGGAGTATAAAATCCGATTCTACTTTTGATCTAGTATGCAAGGTTCTAGATGTT
CATGAAGCTTCCAATGGCGTATGGATTTTGTATGTTTGGGATGGAACTGATACACCTGTG
ACCGAGTTCCCGACCTTGGACAATGAATCAGTTTCTCCACCCCCTCTACATCTTGAAGGA
GCACCTCTGCCAAGGGAGGTTTTGTGCACATTGCCTTGTGTTGGGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5841#0      TTTTGCAGTTGCAGCCTTGCACCTCCCTCCCATTAACTTGTCCTCGCTCACCAAGGTGCC 60
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      CACGTCGCTGCGCGCACAAATTCGGGCCATGGAGGAGGCAGCGGCGCCGGAGCGGAAGCG 120
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      GCCGCGCGACGGCGACGTGGGTCCATCGACGGCGGCATCCGGGGAGGCGCAGTACGTGTA 180
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      CCTGCCCATCGCCGACGCGCTGAAGGCCCCCGGGGCCCGGGTCTGCCTCTTCGCCGCCGT 240
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      CTCCGAGATCGGCGCGGCCGTCCGCAGCCGCGGCACCGGTGAGCCTCCTTCTCGCCCGCA 300
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      CTTTCGAGTCCCCCCCCCCCCCCCCCTGAGAGCAGGGTTTAGGGTTTTGGTCGCTATAGC 360
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      GGATTTGGAGCTGTTTGGGGTTGCTACTGGACTAATAATTTTCAGTGCTCAAATGTGCTC 420
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      GGTCATGGTGGGGGAGATTAGGTCGAGTTTCCGCACCCGATTTGCGAGCTGTTCTGATTG 480
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      TAAATGCTAGGGAAAGAGGAAGATGTGGGGTTTTAGGTGTAGGCCTATAGCCATGCCGAA 540
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      GTTCTGAACACTGAACAGAACAGGGTCATTTTTGGGGGATTTTTGCTGTTAATTGGATGA 600
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      AGAAGCAAACCTGGTGAGTTCTAATGGCTGTATCTGAAATCGCCAATTATAGATGAGCTT 660
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      ACCATGTTCCACCTTGGAGGAGTTTCTTTGGTTGGTTATTGAGCTCAATTGTGATTATAT 720
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      TCTTATACATTTGCTATTGCAGAAATGCCTGTATGACAGGTTTAACAATTTTTGTTTTTT 780
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      GTTGATTCTTTTGTGATTATACCTGCAATTGACGTCGTGCTACTTATCCATGGCTATCAT 840
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      TTGTGCAGATTTCACTCTTACGTTGAGGATTGTGGATCACTCACGTGCATCTGCAATCTC 900
consensus_5841#1      ----------------------------------------------GCATCTGCAATCTC 14
                                                                    **************

consensus_5841#0      TGTGACCTTCTTTGCTGATAACACTGCATTACTGCCCTGTGTTAGGTCAAGTGGAGATGT 960
consensus_5841#1      TGTGACCTTCTTTGCTGATAACACTGCATTACTGCCCTGTGTTAGGTCAAGTGGAGATGT 74
                      ************************************************************

consensus_5841#0      GATCAGTCTCCATAATGTTGTGATAACAATGCACCATGGCGAATTCTTTGTCACATATAA 1020
consensus_5841#1      GATCAGTCTCCATAATGTTGTGATAACAATGCACCATGGCGAATTCTTTGTCACATATAA 134
                      ************************************************************

consensus_5841#0      CAAAAGGTTTTCTTCATTTGCGCTATTTGAAGGGAAAGTATCTACGGGATGCATACCATA 1080
consensus_5841#1      CAAAAGGTTTTCTTCATTTGCGCTATTTGAAGGGAAAGTATCTACGGGATGCATACCATA 194
                      ************************************************************

consensus_5841#0      TCAGCATTCTATGAAATACCATGGCAGCAAACATGACAGTGAATTTTTGACTCACTTGAG 1140
consensus_5841#1      TCAGCATTCTATGAAATACCATGGCAGCAAACATGACAGTGAATTTTTGACTCACTTGAG 254
                      ************************************************************

consensus_5841#0      AATGTGGATTGTATATAATCCTCCAGGTGAGTATG----TGACTGCTAGTTGAAAAATTA 1196
consensus_5841#1      AATGTGGATTGTATATAATCCTCCAGGTCTGAAAGATCTTGAACTGCAGTTAAGGAGT-A 313
                      ****************************  * * *    ***     **** *  * * *

consensus_5841#0      TTGTTGCTCATTTTTCTCTTGTCCACTCATAAGCTATACGGATGATATGTCTTGTGAAG- 1255
consensus_5841#1      TAAAATCCGATTCTACTTTTGATC--TAGTATGCAAGGTTCTAGATGT---TCATGAAGC 368
                      *     *  *** * ** ***  *  *  ** ** *       *** *   *  ***** 

consensus_5841#0      TTGTGATACTCCA-AAACTTTGCACATCTACGAATATTATAAGGAACAACATGCCTAGAA 1314
consensus_5841#1      TTCCAATGGCGTATGGATTTTGTATGTTTGGGA---TGGAACTGATACACCTGTGACCGA 425
                      **   **     *   * **** *  * *  **   *   *  **   ** **      *

consensus_5841#0      GCTCCTAACCCACATGAGAATATGTTGTTATCAATTCCTGATTTTACCAGTTGCTGTGAA 1374
consensus_5841#1      GTTCCCGACCTTG--GACAATGAATCAGTTTCTCCACCCCCTCTACATCTTGAAGGAGCA 483
                      * ***  ***     ** ***   *   * **    **   * *      *    * * *

consensus_5841#0      CATACATCGATATATGACTCATATACAATCATTAGTATACAATCGATAACATACTCTCCT 1434
consensus_5841#1      CCTCTGCCAAGGGAGGTTTTGTGCACATTGCCTTGTGTTGGGA----------------- 526
                      * *    * *   * *  *  *  *** *   * ** *                      

consensus_5841#0      TTACCCAAAAGTTAAGCATTATTACATAAACACGTGTACAATAGAACACCCATTCTTTTC 1494
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      TTTACAACCTTAGGACAGGATGCCTAGGTTTCGGTCAAATAAAATAAAAGCCTTCAAATT 1554
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      GGTTGTCAGCTCTACATTTCTTTCTAATTTTTTTAAATTTTTGGTTGTCAGCTCTTTAGC 1614
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      ATTATCATGTTTTATTGACTGCCTGTCCTAGCAGTACCTGTTGAGTATATGATTCACCTA 1674
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      CTTTTGGATACTCGTCCGTCTATTATAATGTGGCTTATGCTCAACAGCATCTACTGATTT 1734
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      ACGTCTATGTATTTTGCACAAAATGCAGATTACCGAAATATTTATATCTTCTCTGCTGAA 1794
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      TACATGCACTACAAATATCTGTTGCAACACTCTTTCTTTTTCTAACAAGCTATTTTGCTC 1854
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      TCTAGGTCTGAAAGATCTTGAACTGCAGTTAAGGAGTATAAAATCCGATTCTACTTTTGA 1914
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      TCTAGTATGCAAGGTTAGCTCTATATGAAGTTACATAATATTCAACAGTTATTTGAATAG 1974
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      AGGAAATCTGATGTTCCTTTTTGTTAGGTTCTAGATGTTCATGAAGCTTCCAATGGCGTA 2034
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      TGGATTTTGTATGTTTGGGATGGAACTGATACACCTGTGACCGAGTTCCCGACGTAAAAA 2094
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      TTAGACATTGGTGTCACTGTTTAATTTTTAATTCAGAAATAACTTAAAATTAATTCTGCA 2154
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      AAATAGGATGGTGTTGGTGCTTATAACATTGTGTTGAAGTAAATTGTGCCTCTGCCATTT 2214
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      CTTTCATAACGTATGGCATAATATGATAATAACAGTTCATTTTTAACTAAATTGCGCCTA 2274
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      TGTTGTTTGGCTTGGTTGAATGCAGCTTGGACAATGAATCAGTTTCTCCACCCCCTCTAC 2334
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      ATCTTGAAGGAGCACCTCTGCCAAGGGAGGTTTTGTGCACATTGCCTTGTGTTGGGAGTG 2394
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      TGCTGAGGGTTTTCTCAAACAGGTTTTTCAAGGAAATGCTACACTTGCAAAAGGGTATTT 2454
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      ATTGGGCCAGGTTCTGTAATATGACGTGCAAGCAGCAGTTTGGCATGTGGAAAGGGATTC 2514
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      TGCTGCCTTCTAGCAGAGTCCGCCTTTTATCAAATGAAGATGGCAGCGTTGCTGATCGTC 2574
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      TGAAGCTATTCGACAGTCGCATTGCCACCCAAATTCATCGTCAGCCAATGGCAAGCCTCC 2634
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      CCAATGCTTCTGATATTGCTGATGTAGAATACGAGAGAGCAGGTTACACAACATTGATGG 2694
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      AGTCGCTCACCCATGGAGAGGTGACGCACAAATTCAAAACCTTGGTTCGAGTTGTTGCAG 2754
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      CATATCCACGTGGAGCTAGTCATCTTTGTTCACTATTGGCTGGCAATTGTTGTCTAAGGT 2814
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      TGACTCTTGAGGATCCTACGGCAAGAATTCATGCGTACATCCACAAGGACGATGGGGCCA 2874
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      AATTTTTTGGTGGTTTCCTGACGGCAGAAGCTGTGATCAGAAAGATGAACAAGCTTCTGG 2934
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      GTATCCCAGAAGACACCGAGGAAGGTGCTCCATCGAATAGGAACCCACCTTGGATATGGT 2994
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      GTTGCTTGAAGTCTTACCGTCTGGACAAGAACGATCCCTGGGGAAGCAGAAGGTATCGGA 3054
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      TTTTTGGCACAGAGATCAGGGATTGAATAGGGGAGAAAGATTTGGAGCAACTTGGAAATT 3114
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      ACTGTGTACAGTGGCATTTGCTTGTGGTACAGACACGCAAATTGACTGAGTTGTAACAGC 3174
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      TAGGTGACAGCCTTTCGGTTGGTGCTACTACCTACAATGTTACTGTGATGCTGTTAGCAT 3234
consensus_5841#1      ------------------------------------------------------------
                                                                                  

consensus_5841#0      TTGGTAATGCCAGATGATTT 3254
consensus_5841#1      --------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)